EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000016380 (Gene tree)
Gene ID: 100555634
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 13182 bases
Position: chrGL343856.1:69861-83042
Accession: 100555634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000016102	MMR_HSR1	PF01926.23	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016422	SRL-201	1729	XM_003229245	ENSACAP00000016102	546 (aa)	XP_003229293	H9GN63

Gene Model

Click here to download ENSACAG00000016380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000016380	SRL	55	33.333	ENSACAG00000014864	EHD4	53	33.333
ENSACAG00000016380	SRL	58	36.392	ENSACAG00000007103	EHD3	56	36.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016380	SRL	86	88.248	ENSG00000185739	SRL	99	90.045	Homo_sapiens
ENSACAG00000016380	SRL	89	79.098	ENSAPOG00000018093	srl	99	81.718	Acanthochromis_polyacanthus
ENSACAG00000016380	SRL	83	74.066	ENSAPOG00000012432	SRL	98	74.172	Acanthochromis_polyacanthus
ENSACAG00000016380	SRL	99	77.620	ENSAMEG00000010862	SRL	50	90.508	Ailuropoda_melanoleuca
ENSACAG00000016380	SRL	85	80.645	ENSACIG00000015799	srl	98	81.898	Amphilophus_citrinellus
ENSACAG00000016380	SRL	84	73.246	ENSACIG00000015419	SRL	98	73.510	Amphilophus_citrinellus
ENSACAG00000016380	SRL	82	82.472	ENSAOCG00000007574	srl	99	82.472	Amphiprion_ocellaris
ENSACAG00000016380	SRL	86	72.093	ENSAOCG00000017049	SRL	96	73.789	Amphiprion_ocellaris
ENSACAG00000016380	SRL	89	81.557	ENSAPEG00000006911	srl	94	84.768	Amphiprion_percula
ENSACAG00000016380	SRL	86	68.432	ENSAPEG00000006533	SRL	96	70.705	Amphiprion_percula
ENSACAG00000016380	SRL	85	70.417	ENSATEG00000009643	SRL	52	71.888	Anabas_testudineus
ENSACAG00000016380	SRL	89	82.172	ENSATEG00000024315	srl	100	80.943	Anabas_testudineus
ENSACAG00000016380	SRL	83	71.368	ENSACLG00000024674	SRL	54	76.250	Astatotilapia_calliptera
ENSACAG00000016380	SRL	89	81.352	ENSACLG00000027685	srl	97	82.340	Astatotilapia_calliptera
ENSACAG00000016380	SRL	90	80.448	ENSAMXG00000018789	srl	93	80.041	Astyanax_mexicanus
ENSACAG00000016380	SRL	82	71.619	ENSAMXG00000038693	SRL	99	70.690	Astyanax_mexicanus
ENSACAG00000016380	SRL	85	88.362	ENSBTAG00000001078	SRL	56	89.602	Bos_taurus
ENSACAG00000016380	SRL	83	90.287	ENSCJAG00000019750	SRL	93	90.287	Callithrix_jacchus
ENSACAG00000016380	SRL	97	80.410	ENSCAFG00000019233	SRL	82	90.508	Canis_familiaris
ENSACAG00000016380	SRL	85	89.032	ENSCAFG00020025024	SRL	54	90.508	Canis_lupus_dingo
ENSACAG00000016380	SRL	99	79.705	ENSCHIG00000017927	SRL	55	89.602	Capra_hircus
ENSACAG00000016380	SRL	89	86.475	ENSTSYG00000007919	SRL	99	90.950	Carlito_syrichta
ENSACAG00000016380	SRL	85	89.224	ENSCPOG00000012643	SRL	100	86.066	Cavia_porcellus
ENSACAG00000016380	SRL	83	84.327	ENSCCAG00000032646	SRL	100	93.140	Cebus_capucinus
ENSACAG00000016380	SRL	86	87.872	ENSCATG00000032227	-	93	89.845	Cercocebus_atys
ENSACAG00000016380	SRL	85	89.009	ENSCLAG00000016242	SRL	100	85.861	Chinchilla_lanigera
ENSACAG00000016380	SRL	71	93.247	ENSCHOG00000001618	SRL	52	93.247	Choloepus_hoffmanni
ENSACAG00000016380	SRL	89	92.608	ENSCPBG00000026371	SRL	99	91.170	Chrysemys_picta_bellii
ENSACAG00000016380	SRL	84	56.579	ENSCING00000005231	-	93	59.016	Ciona_intestinalis
ENSACAG00000016380	SRL	85	88.412	ENSCANG00000035872	SRL	99	90.045	Colobus_angolensis_palliatus
ENSACAG00000016380	SRL	86	88.723	ENSCGRG00001016630	Srl	100	86.475	Cricetulus_griseus_chok1gshd
ENSACAG00000016380	SRL	86	88.723	ENSCGRG00000005458	Srl	100	86.475	Cricetulus_griseus_crigri
ENSACAG00000016380	SRL	88	68.182	ENSCSEG00000011866	SRL	89	70.705	Cynoglossus_semilaevis
ENSACAG00000016380	SRL	89	80.738	ENSCSEG00000016151	srl	94	84.547	Cynoglossus_semilaevis
ENSACAG00000016380	SRL	85	72.304	ENSCVAG00000022465	SRL	60	73.218	Cyprinodon_variegatus
ENSACAG00000016380	SRL	89	81.352	ENSCVAG00000003513	srl	100	81.352	Cyprinodon_variegatus
ENSACAG00000016380	SRL	69	76.042	ENSDARG00000112959	CABZ01072309.1	100	76.042	Danio_rerio
ENSACAG00000016380	SRL	88	82.816	ENSDARG00000104587	srl	94	85.651	Danio_rerio
ENSACAG00000016380	SRL	85	88.769	ENSDNOG00000011643	SRL	53	90.066	Dasypus_novemcinctus
ENSACAG00000016380	SRL	86	89.530	ENSDORG00000014807	Srl	100	86.885	Dipodomys_ordii
ENSACAG00000016380	SRL	67	66.043	ENSEBUG00000015937	srl	94	66.043	Eptatretus_burgeri
ENSACAG00000016380	SRL	85	88.961	ENSEASG00005000942	SRL	53	90.265	Equus_asinus_asinus
ENSACAG00000016380	SRL	89	86.653	ENSECAG00000024219	SRL	99	85.626	Equus_caballus
ENSACAG00000016380	SRL	89	80.244	ENSELUG00000015616	srl	100	78.571	Esox_lucius
ENSACAG00000016380	SRL	89	86.475	ENSFCAG00000022075	SRL	100	85.861	Felis_catus
ENSACAG00000016380	SRL	85	89.871	ENSFALG00000004328	SRL	63	90.949	Ficedula_albicollis
ENSACAG00000016380	SRL	85	89.655	ENSFDAG00000006199	SRL	100	86.475	Fukomys_damarensis
ENSACAG00000016380	SRL	84	74.123	ENSFHEG00000011854	SRL	98	74.393	Fundulus_heteroclitus
ENSACAG00000016380	SRL	89	80.943	ENSFHEG00000011239	srl	100	79.918	Fundulus_heteroclitus
ENSACAG00000016380	SRL	83	83.040	ENSGMOG00000014954	srl	99	83.186	Gadus_morhua
ENSACAG00000016380	SRL	85	92.888	ENSGALG00000038884	SRL	99	87.474	Gallus_gallus
ENSACAG00000016380	SRL	85	74.459	ENSGAFG00000016984	SRL	98	75.276	Gambusia_affinis
ENSACAG00000016380	SRL	89	81.762	ENSGAFG00000000010	srl	100	80.533	Gambusia_affinis
ENSACAG00000016380	SRL	83	83.736	ENSGACG00000011332	srl	99	84.071	Gasterosteus_aculeatus
ENSACAG00000016380	SRL	86	88.248	ENSGGOG00000011312	-	100	85.246	Gorilla_gorilla
ENSACAG00000016380	SRL	83	71.154	ENSHBUG00000015710	SRL	56	71.459	Haplochromis_burtoni
ENSACAG00000016380	SRL	89	81.352	ENSHBUG00000007581	srl	97	82.340	Haplochromis_burtoni
ENSACAG00000016380	SRL	85	89.655	ENSHGLG00000015271	SRL	100	86.475	Heterocephalus_glaber_female
ENSACAG00000016380	SRL	85	89.655	ENSHGLG00100019378	SRL	100	86.475	Heterocephalus_glaber_male
ENSACAG00000016380	SRL	90	80.691	ENSHCOG00000008687	srl	98	81.678	Hippocampus_comes
ENSACAG00000016380	SRL	83	71.030	ENSHCOG00000001012	SRL	50	71.121	Hippocampus_comes
ENSACAG00000016380	SRL	89	80.573	ENSIPUG00000012513	srl	94	83.444	Ictalurus_punctatus
ENSACAG00000016380	SRL	78	70.492	ENSIPUG00000011609	SRL	91	70.492	Ictalurus_punctatus
ENSACAG00000016380	SRL	86	88.511	ENSSTOG00000021151	-	100	86.066	Ictidomys_tridecemlineatus
ENSACAG00000016380	SRL	89	86.885	ENSJJAG00000016400	Srl	100	86.475	Jaculus_jaculus
ENSACAG00000016380	SRL	88	80.962	ENSKMAG00000014115	srl	95	80.962	Kryptolebias_marmoratus
ENSACAG00000016380	SRL	83	74.614	ENSKMAG00000019537	SRL	100	74.614	Kryptolebias_marmoratus
ENSACAG00000016380	SRL	86	72.187	ENSLBEG00000013811	SRL	95	73.568	Labrus_bergylta
ENSACAG00000016380	SRL	89	80.738	ENSLBEG00000026643	srl	94	83.664	Labrus_bergylta
ENSACAG00000016380	SRL	89	84.631	ENSLACG00000002825	SRL	100	83.607	Latimeria_chalumnae
ENSACAG00000016380	SRL	89	80.825	ENSLOCG00000002644	srl	94	84.768	Lepisosteus_oculatus
ENSACAG00000016380	SRL	99	78.388	ENSLAFG00000006329	SRL	50	89.845	Loxodonta_africana
ENSACAG00000016380	SRL	81	90.045	ENSMFAG00000037383	SRL	99	90.045	Macaca_fascicularis
ENSACAG00000016380	SRL	89	86.186	ENSMNEG00000019236	-	93	89.845	Macaca_nemestrina
ENSACAG00000016380	SRL	85	80.901	ENSMLEG00000032156	SRL	93	81.898	Mandrillus_leucophaeus
ENSACAG00000016380	SRL	84	82.456	ENSMAMG00000023322	srl	94	82.781	Mastacembelus_armatus
ENSACAG00000016380	SRL	83	72.103	ENSMAMG00000013756	SRL	53	72.103	Mastacembelus_armatus
ENSACAG00000016380	SRL	89	81.352	ENSMZEG00005004548	srl	97	82.340	Maylandia_zebra
ENSACAG00000016380	SRL	83	71.368	ENSMZEG00005004010	SRL	57	71.674	Maylandia_zebra
ENSACAG00000016380	SRL	86	90.150	ENSMGAG00000009342	SRL	92	91.799	Meleagris_gallopavo
ENSACAG00000016380	SRL	91	84.708	ENSMICG00000032307	SRL	99	86.335	Microcebus_murinus
ENSACAG00000016380	SRL	89	86.680	ENSMOCG00000008208	Srl	100	86.270	Microtus_ochrogaster
ENSACAG00000016380	SRL	85	80.952	ENSMMOG00000013970	srl	98	81.898	Mola_mola
ENSACAG00000016380	SRL	83	72.648	ENSMMOG00000021572	SRL	99	72.747	Mola_mola
ENSACAG00000016380	SRL	79	74.246	ENSMALG00000000670	SRL	98	74.246	Monopterus_albus
ENSACAG00000016380	SRL	86	79.915	ENSMALG00000005039	srl	98	81.457	Monopterus_albus
ENSACAG00000016380	SRL	86	89.362	MGP_CAROLIEiJ_G0020400	Srl	100	86.885	Mus_caroli
ENSACAG00000016380	SRL	86	89.362	ENSMUSG00000022519	Srl	100	86.885	Mus_musculus
ENSACAG00000016380	SRL	86	89.362	MGP_SPRETEiJ_G0021294	Srl	100	86.885	Mus_spretus
ENSACAG00000016380	SRL	85	89.247	ENSMPUG00000015025	SRL	53	90.508	Mustela_putorius_furo
ENSACAG00000016380	SRL	85	89.914	ENSMLUG00000030733	SRL	55	91.170	Myotis_lucifugus
ENSACAG00000016380	SRL	85	89.871	ENSNGAG00000019741	Srl	100	87.090	Nannospalax_galili
ENSACAG00000016380	SRL	89	79.098	ENSNBRG00000023775	srl	94	82.340	Neolamprologus_brichardi
ENSACAG00000016380	SRL	83	70.940	ENSNBRG00000002422	SRL	58	70.346	Neolamprologus_brichardi
ENSACAG00000016380	SRL	86	81.624	ENSNLEG00000029051	SRL	100	79.098	Nomascus_leucogenys
ENSACAG00000016380	SRL	85	83.011	ENSOPRG00000000477	-	52	84.327	Ochotona_princeps
ENSACAG00000016380	SRL	85	89.224	ENSODEG00000013256	SRL	100	86.066	Octodon_degus
ENSACAG00000016380	SRL	89	81.148	ENSONIG00000005192	srl	94	84.547	Oreochromis_niloticus
ENSACAG00000016380	SRL	90	80.285	ENSORLG00000008291	srl	93	84.733	Oryzias_latipes
ENSACAG00000016380	SRL	84	72.807	ENSORLG00000015064	SRL	96	72.848	Oryzias_latipes
ENSACAG00000016380	SRL	99	74.317	ENSORLG00020019784	srl	96	73.636	Oryzias_latipes_hni
ENSACAG00000016380	SRL	84	73.026	ENSORLG00020018173	SRL	96	73.068	Oryzias_latipes_hni
ENSACAG00000016380	SRL	84	73.026	ENSORLG00015019063	SRL	96	73.068	Oryzias_latipes_hsok
ENSACAG00000016380	SRL	90	79.878	ENSORLG00015009342	srl	98	79.108	Oryzias_latipes_hsok
ENSACAG00000016380	SRL	89	80.533	ENSOMEG00000010006	srl	100	79.755	Oryzias_melastigma
ENSACAG00000016380	SRL	84	71.002	ENSOMEG00000005682	SRL	53	71.245	Oryzias_melastigma
ENSACAG00000016380	SRL	86	88.889	ENSOGAG00000029266	SRL	54	90.728	Otolemur_garnettii
ENSACAG00000016380	SRL	87	87.212	ENSOARG00000003074	SRL	55	89.602	Ovis_aries
ENSACAG00000016380	SRL	86	88.248	ENSPPAG00000024919	-	99	90.045	Pan_paniscus
ENSACAG00000016380	SRL	89	86.680	ENSPPRG00000010274	SRL	99	90.950	Panthera_pardus
ENSACAG00000016380	SRL	89	86.680	ENSPTIG00000015162	SRL	99	90.950	Panthera_tigris_altaica
ENSACAG00000016380	SRL	86	88.248	ENSPTRG00000007712	SRL	99	90.045	Pan_troglodytes
ENSACAG00000016380	SRL	86	88.298	ENSPANG00000013804	SRL	95	89.845	Papio_anubis
ENSACAG00000016380	SRL	95	70.849	ENSPKIG00000024974	SRL	98	69.884	Paramormyrops_kingsleyae
ENSACAG00000016380	SRL	89	82.209	ENSPKIG00000006405	srl	100	80.123	Paramormyrops_kingsleyae
ENSACAG00000016380	SRL	87	79.245	ENSPMGG00000021081	srl	95	82.119	Periophthalmus_magnuspinnatus
ENSACAG00000016380	SRL	83	72.185	ENSPMGG00000023505	-	99	72.185	Periophthalmus_magnuspinnatus
ENSACAG00000016380	SRL	85	89.224	ENSPEMG00000015842	Srl	100	86.475	Peromyscus_maniculatus_bairdii
ENSACAG00000016380	SRL	79	69.108	ENSPMAG00000004786	srl	99	69.108	Petromyzon_marinus
ENSACAG00000016380	SRL	85	89.224	ENSPCIG00000012128	SRL	96	90.265	Phascolarctos_cinereus
ENSACAG00000016380	SRL	90	81.098	ENSPFOG00000011408	srl	93	85.398	Poecilia_formosa
ENSACAG00000016380	SRL	87	80.761	ENSPLAG00000008017	srl	96	82.781	Poecilia_latipinna
ENSACAG00000016380	SRL	85	73.377	ENSPLAG00000002932	SRL	98	74.172	Poecilia_latipinna
ENSACAG00000016380	SRL	90	78.862	ENSPMEG00000006745	srl	96	82.781	Poecilia_mexicana
ENSACAG00000016380	SRL	85	71.368	ENSPMEG00000005890	SRL	59	72.532	Poecilia_mexicana
ENSACAG00000016380	SRL	90	80.894	ENSPREG00000007751	srl	98	82.561	Poecilia_reticulata
ENSACAG00000016380	SRL	85	74.459	ENSPREG00000000315	SRL	98	75.055	Poecilia_reticulata
ENSACAG00000016380	SRL	79	90.487	ENSPPYG00000007053	SRL	98	90.487	Pongo_abelii
ENSACAG00000016380	SRL	86	89.079	ENSPCAG00000003378	-	50	90.929	Procavia_capensis
ENSACAG00000016380	SRL	86	88.675	ENSPCOG00000023135	SRL	99	90.724	Propithecus_coquereli
ENSACAG00000016380	SRL	85	89.892	ENSPVAG00000006586	SRL	54	91.170	Pteropus_vampyrus
ENSACAG00000016380	SRL	83	71.368	ENSPNYG00000003423	SRL	56	71.674	Pundamilia_nyererei
ENSACAG00000016380	SRL	89	81.352	ENSPNYG00000001200	srl	97	82.340	Pundamilia_nyererei
ENSACAG00000016380	SRL	86	71.610	ENSPNAG00000007361	-	91	73.289	Pygocentrus_nattereri
ENSACAG00000016380	SRL	89	80.533	ENSPNAG00000023106	srl	100	80.533	Pygocentrus_nattereri
ENSACAG00000016380	SRL	83	90.287	ENSSBOG00000029273	SRL	93	90.287	Saimiri_boliviensis_boliviensis
ENSACAG00000016380	SRL	89	82.582	ENSSFOG00015009773	srl	94	85.430	Scleropages_formosus
ENSACAG00000016380	SRL	89	79.098	ENSSMAG00000016274	srl	100	80.123	Scophthalmus_maximus
ENSACAG00000016380	SRL	83	70.878	ENSSMAG00000002232	SRL	50	71.092	Scophthalmus_maximus
ENSACAG00000016380	SRL	84	82.456	ENSSDUG00000010808	srl	97	82.781	Seriola_dumerili
ENSACAG00000016380	SRL	83	73.913	ENSSDUG00000009161	SRL	98	73.913	Seriola_dumerili
ENSACAG00000016380	SRL	83	73.391	ENSSLDG00000014601	SRL	99	73.605	Seriola_lalandi_dorsalis
ENSACAG00000016380	SRL	85	84.233	ENSSLDG00000022024	srl	100	81.967	Seriola_lalandi_dorsalis
ENSACAG00000016380	SRL	85	90.968	ENSSPUG00000016859	SRL	97	92.274	Sphenodon_punctatus
ENSACAG00000016380	SRL	89	81.557	ENSSPAG00000019105	srl	94	84.989	Stegastes_partitus
ENSACAG00000016380	SRL	83	73.951	ENSSPAG00000014254	SRL	98	73.951	Stegastes_partitus
ENSACAG00000016380	SRL	86	87.794	ENSSSCG00000007949	SRL	98	89.602	Sus_scrofa
ENSACAG00000016380	SRL	66	94.475	ENSTGUG00000016121	-	100	94.475	Taeniopygia_guttata
ENSACAG00000016380	SRL	85	90.086	ENSTGUG00000003951	-	97	91.170	Taeniopygia_guttata
ENSACAG00000016380	SRL	89	80.943	ENSTRUG00000006005	srl	100	80.943	Takifugu_rubripes
ENSACAG00000016380	SRL	79	73.611	ENSTRUG00000013310	SRL	55	73.611	Takifugu_rubripes
ENSACAG00000016380	SRL	85	80.994	ENSTNIG00000009739	srl	100	78.689	Tetraodon_nigroviridis
ENSACAG00000016380	SRL	85	88.627	ENSUAMG00000005701	SRL	55	90.508	Ursus_americanus
ENSACAG00000016380	SRL	85	88.627	ENSUMAG00000002574	SRL	54	90.508	Ursus_maritimus
ENSACAG00000016380	SRL	88	85.833	ENSXETG00000017313	srl	98	89.625	Xenopus_tropicalis
ENSACAG00000016380	SRL	79	83.372	ENSXCOG00000010424	srl	97	83.372	Xiphophorus_couchianus
ENSACAG00000016380	SRL	85	73.810	ENSXCOG00000014584	SRL	98	74.614	Xiphophorus_couchianus
ENSACAG00000016380	SRL	85	71.789	ENSXMAG00000027598	SRL	62	72.747	Xiphophorus_maculatus
ENSACAG00000016380	SRL	90	80.894	ENSXMAG00000004625	srl	96	79.878	Xiphophorus_maculatus