EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000016548 (Gene tree)
Gene ID: 100565621
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 40708 bases
Position: chr2:141011047-141051754
Accession: 100565621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000016298	Exo_endo_phos	PF03372.23	8.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016622	CNOT6-201	1805	XM_003217464	ENSACAP00000016298	557 (aa)	XP_003217512	G1KSS5

Gene Model

Click here to download ENSACAG00000016548's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000016548	CNOT6	99	78.058	ENSACAG00000012099	CNOT6L	99	78.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016548	CNOT6	100	92.998	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSACAG00000016548	CNOT6	100	87.657	ENSAPOG00000009994	cnot6b	100	87.657	Acanthochromis_polyacanthus
ENSACAG00000016548	CNOT6	100	93.739	ENSAMEG00000000949	CNOT6	99	93.739	Ailuropoda_melanoleuca
ENSACAG00000016548	CNOT6	100	86.047	ENSACIG00000016566	cnot6b	100	86.047	Amphilophus_citrinellus
ENSACAG00000016548	CNOT6	100	87.657	ENSAOCG00000006893	cnot6b	100	87.657	Amphiprion_ocellaris
ENSACAG00000016548	CNOT6	100	87.657	ENSAPEG00000016949	cnot6b	100	87.657	Amphiprion_percula
ENSACAG00000016548	CNOT6	100	85.510	ENSATEG00000007862	cnot6b	100	85.510	Anabas_testudineus
ENSACAG00000016548	CNOT6	100	96.050	ENSAPLG00000012715	CNOT6	99	96.050	Anas_platyrhynchos
ENSACAG00000016548	CNOT6	100	93.357	ENSANAG00000030436	CNOT6	96	93.357	Aotus_nancymaae
ENSACAG00000016548	CNOT6	100	85.689	ENSACLG00000008279	cnot6b	100	86.762	Astatotilapia_calliptera
ENSACAG00000016548	CNOT6	100	84.946	ENSAMXG00000034694	cnot6b	100	84.946	Astyanax_mexicanus
ENSACAG00000016548	CNOT6	100	86.738	ENSAMXG00000019140	cnot6a	100	86.738	Astyanax_mexicanus
ENSACAG00000016548	CNOT6	100	93.716	ENSBTAG00000017362	CNOT6	100	93.716	Bos_taurus
ENSACAG00000016548	CNOT6	100	93.178	ENSCJAG00000009795	CNOT6	100	93.178	Callithrix_jacchus
ENSACAG00000016548	CNOT6	100	93.896	ENSCAFG00000000464	CNOT6	100	93.896	Canis_familiaris
ENSACAG00000016548	CNOT6	100	93.896	ENSCAFG00020002441	CNOT6	100	93.896	Canis_lupus_dingo
ENSACAG00000016548	CNOT6	100	93.357	ENSCHIG00000019100	CNOT6	100	93.357	Capra_hircus
ENSACAG00000016548	CNOT6	100	92.280	ENSTSYG00000003982	CNOT6	100	92.280	Carlito_syrichta
ENSACAG00000016548	CNOT6	100	88.869	ENSCPOG00000035657	CNOT6	100	88.869	Cavia_porcellus
ENSACAG00000016548	CNOT6	100	88.689	ENSCCAG00000033670	CNOT6	100	88.689	Cebus_capucinus
ENSACAG00000016548	CNOT6	100	92.998	ENSCATG00000042014	CNOT6	100	92.998	Cercocebus_atys
ENSACAG00000016548	CNOT6	100	91.921	ENSCLAG00000010489	CNOT6	100	91.921	Chinchilla_lanigera
ENSACAG00000016548	CNOT6	100	92.998	ENSCSAG00000008165	CNOT6	100	92.998	Chlorocebus_sabaeus
ENSACAG00000016548	CNOT6	100	92.819	ENSCHOG00000009680	CNOT6	100	92.819	Choloepus_hoffmanni
ENSACAG00000016548	CNOT6	100	95.871	ENSCPBG00000008908	CNOT6	100	95.871	Chrysemys_picta_bellii
ENSACAG00000016548	CNOT6	100	93.178	ENSCANG00000026756	CNOT6	100	93.178	Colobus_angolensis_palliatus
ENSACAG00000016548	CNOT6	100	91.382	ENSCGRG00001011452	Cnot6	100	91.382	Cricetulus_griseus_chok1gshd
ENSACAG00000016548	CNOT6	100	89.767	ENSCGRG00000010407	Cnot6	100	89.767	Cricetulus_griseus_crigri
ENSACAG00000016548	CNOT6	100	86.225	ENSCSEG00000010939	cnot6b	100	86.225	Cynoglossus_semilaevis
ENSACAG00000016548	CNOT6	100	86.918	ENSCVAG00000010538	cnot6b	100	86.918	Cyprinodon_variegatus
ENSACAG00000016548	CNOT6	100	85.842	ENSDARG00000008255	cnot6a	100	85.842	Danio_rerio
ENSACAG00000016548	CNOT6	100	84.409	ENSDARG00000101072	cnot6b	100	84.409	Danio_rerio
ENSACAG00000016548	CNOT6	100	93.896	ENSDNOG00000041644	CNOT6	100	93.896	Dasypus_novemcinctus
ENSACAG00000016548	CNOT6	100	82.406	ENSDORG00000001708	Cnot6	100	82.406	Dipodomys_ordii
ENSACAG00000016548	CNOT6	100	75.492	ENSETEG00000006975	CNOT6	100	75.492	Echinops_telfairi
ENSACAG00000016548	CNOT6	90	87.600	ENSEASG00005012957	-	99	87.600	Equus_asinus_asinus
ENSACAG00000016548	CNOT6	100	93.537	ENSEASG00005012794	-	100	93.537	Equus_asinus_asinus
ENSACAG00000016548	CNOT6	100	94.255	ENSECAG00000019325	CNOT6	100	94.255	Equus_caballus
ENSACAG00000016548	CNOT6	100	87.792	ENSECAG00000012704	-	99	87.792	Equus_caballus
ENSACAG00000016548	CNOT6	100	93.178	ENSEEUG00000015382	CNOT6	100	93.178	Erinaceus_europaeus
ENSACAG00000016548	CNOT6	100	82.892	ENSELUG00000015981	cnot6b	99	82.892	Esox_lucius
ENSACAG00000016548	CNOT6	100	82.796	ENSELUG00000024580	cnot6a	100	82.796	Esox_lucius
ENSACAG00000016548	CNOT6	100	94.075	ENSFCAG00000001881	CNOT6	100	94.075	Felis_catus
ENSACAG00000016548	CNOT6	100	95.691	ENSFALG00000007699	CNOT6	100	95.691	Ficedula_albicollis
ENSACAG00000016548	CNOT6	100	91.562	ENSFDAG00000001999	CNOT6	100	91.562	Fukomys_damarensis
ENSACAG00000016548	CNOT6	65	90.476	ENSFHEG00000013756	cnot6b	94	94.872	Fundulus_heteroclitus
ENSACAG00000016548	CNOT6	95	85.444	ENSGMOG00000009767	cnot6b	99	85.444	Gadus_morhua
ENSACAG00000016548	CNOT6	100	95.512	ENSGALG00000034316	CNOT6	100	95.512	Gallus_gallus
ENSACAG00000016548	CNOT6	100	86.380	ENSGAFG00000008525	cnot6b	100	86.380	Gambusia_affinis
ENSACAG00000016548	CNOT6	95	83.932	ENSGACG00000018046	cnot6b	99	83.932	Gasterosteus_aculeatus
ENSACAG00000016548	CNOT6	100	79.533	ENSGAGG00000012176	CNOT6	100	79.533	Gopherus_agassizii
ENSACAG00000016548	CNOT6	100	92.998	ENSGGOG00000003675	CNOT6	100	92.998	Gorilla_gorilla
ENSACAG00000016548	CNOT6	100	85.868	ENSHBUG00000002819	cnot6b	100	86.941	Haplochromis_burtoni
ENSACAG00000016548	CNOT6	100	91.921	ENSHGLG00000017756	CNOT6	100	91.921	Heterocephalus_glaber_female
ENSACAG00000016548	CNOT6	100	91.921	ENSHGLG00100005747	CNOT6	100	91.921	Heterocephalus_glaber_male
ENSACAG00000016548	CNOT6	100	84.079	ENSHCOG00000016176	cnot6b	100	85.152	Hippocampus_comes
ENSACAG00000016548	CNOT6	100	85.663	ENSIPUG00000019831	cnot6a	100	85.663	Ictalurus_punctatus
ENSACAG00000016548	CNOT6	100	84.588	ENSIPUG00000017482	cnot6b	100	84.588	Ictalurus_punctatus
ENSACAG00000016548	CNOT6	100	93.896	ENSSTOG00000002803	CNOT6	100	93.896	Ictidomys_tridecemlineatus
ENSACAG00000016548	CNOT6	100	91.921	ENSJJAG00000012296	Cnot6	100	91.921	Jaculus_jaculus
ENSACAG00000016548	CNOT6	100	87.455	ENSKMAG00000004640	cnot6b	100	87.455	Kryptolebias_marmoratus
ENSACAG00000016548	CNOT6	100	84.079	ENSLBEG00000027917	cnot6b	100	85.152	Labrus_bergylta
ENSACAG00000016548	CNOT6	100	90.143	ENSLOCG00000010102	cnot6b	99	90.143	Lepisosteus_oculatus
ENSACAG00000016548	CNOT6	100	94.255	ENSLAFG00000016742	CNOT6	100	94.255	Loxodonta_africana
ENSACAG00000016548	CNOT6	100	92.998	ENSMFAG00000030867	CNOT6	100	92.998	Macaca_fascicularis
ENSACAG00000016548	CNOT6	100	92.998	ENSMMUG00000018690	CNOT6	100	92.998	Macaca_mulatta
ENSACAG00000016548	CNOT6	100	92.998	ENSMNEG00000038565	CNOT6	100	92.998	Macaca_nemestrina
ENSACAG00000016548	CNOT6	100	92.998	ENSMLEG00000010555	CNOT6	100	92.998	Mandrillus_leucophaeus
ENSACAG00000016548	CNOT6	100	87.299	ENSMAMG00000007515	cnot6b	100	87.299	Mastacembelus_armatus
ENSACAG00000016548	CNOT6	100	85.689	ENSMZEG00005012899	cnot6b	100	86.762	Maylandia_zebra
ENSACAG00000016548	CNOT6	100	92.460	ENSMAUG00000019798	Cnot6	100	92.460	Mesocricetus_auratus
ENSACAG00000016548	CNOT6	98	83.824	ENSMICG00000028378	-	99	83.824	Microcebus_murinus
ENSACAG00000016548	CNOT6	100	92.101	ENSMICG00000013018	-	100	92.101	Microcebus_murinus
ENSACAG00000016548	CNOT6	100	92.280	ENSMOCG00000021662	Cnot6	100	92.280	Microtus_ochrogaster
ENSACAG00000016548	CNOT6	100	84.409	ENSMMOG00000003227	cnot6b	100	84.409	Mola_mola
ENSACAG00000016548	CNOT6	100	94.434	ENSMODG00000003979	CNOT6	100	94.434	Monodelphis_domestica
ENSACAG00000016548	CNOT6	100	86.941	ENSMALG00000014251	cnot6b	100	86.941	Monopterus_albus
ENSACAG00000016548	CNOT6	100	92.460	MGP_CAROLIEiJ_G0016277	Cnot6	100	92.460	Mus_caroli
ENSACAG00000016548	CNOT6	100	92.460	ENSMUSG00000020362	Cnot6	100	92.460	Mus_musculus
ENSACAG00000016548	CNOT6	100	92.460	MGP_PahariEiJ_G0017413	Cnot6	100	92.460	Mus_pahari
ENSACAG00000016548	CNOT6	100	92.639	MGP_SPRETEiJ_G0017122	Cnot6	100	92.639	Mus_spretus
ENSACAG00000016548	CNOT6	100	93.896	ENSMPUG00000000587	CNOT6	96	93.896	Mustela_putorius_furo
ENSACAG00000016548	CNOT6	100	91.993	ENSMLUG00000010257	CNOT6	100	91.993	Myotis_lucifugus
ENSACAG00000016548	CNOT6	100	91.562	ENSNGAG00000008269	Cnot6	100	91.562	Nannospalax_galili
ENSACAG00000016548	CNOT6	100	85.868	ENSNBRG00000010798	cnot6b	100	86.941	Neolamprologus_brichardi
ENSACAG00000016548	CNOT6	100	91.741	ENSNLEG00000002322	CNOT6	100	91.741	Nomascus_leucogenys
ENSACAG00000016548	CNOT6	81	92.488	ENSMEUG00000000025	CNOT6	81	92.488	Notamacropus_eugenii
ENSACAG00000016548	CNOT6	88	92.363	ENSOPRG00000008244	-	88	92.363	Ochotona_princeps
ENSACAG00000016548	CNOT6	100	91.382	ENSODEG00000007041	CNOT6	100	91.382	Octodon_degus
ENSACAG00000016548	CNOT6	75	86.998	ENSONIG00000013027	cnot6b	99	86.998	Oreochromis_niloticus
ENSACAG00000016548	CNOT6	100	93.716	ENSOANG00000010226	CNOT6	100	93.716	Ornithorhynchus_anatinus
ENSACAG00000016548	CNOT6	100	92.487	ENSOCUG00000011083	CNOT6	100	92.487	Oryctolagus_cuniculus
ENSACAG00000016548	CNOT6	100	85.868	ENSORLG00000005059	cnot6b	100	85.868	Oryzias_latipes
ENSACAG00000016548	CNOT6	100	85.868	ENSORLG00020012784	cnot6b	100	85.868	Oryzias_latipes_hni
ENSACAG00000016548	CNOT6	94	84.895	ENSORLG00015022658	cnot6b	98	84.895	Oryzias_latipes_hsok
ENSACAG00000016548	CNOT6	100	86.404	ENSOMEG00000005295	cnot6b	100	86.404	Oryzias_melastigma
ENSACAG00000016548	CNOT6	94	92.939	ENSOGAG00000032470	CNOT6	100	92.939	Otolemur_garnettii
ENSACAG00000016548	CNOT6	97	93.173	ENSOARG00000001003	CNOT6	100	93.173	Ovis_aries
ENSACAG00000016548	CNOT6	100	92.998	ENSPPAG00000032253	CNOT6	100	92.998	Pan_paniscus
ENSACAG00000016548	CNOT6	100	94.075	ENSPPRG00000011912	CNOT6	100	94.075	Panthera_pardus
ENSACAG00000016548	CNOT6	100	94.075	ENSPTIG00000016794	CNOT6	100	94.075	Panthera_tigris_altaica
ENSACAG00000016548	CNOT6	100	92.998	ENSPTRG00000017636	CNOT6	100	92.998	Pan_troglodytes
ENSACAG00000016548	CNOT6	100	92.998	ENSPANG00000016191	CNOT6	100	92.998	Papio_anubis
ENSACAG00000016548	CNOT6	100	88.172	ENSPKIG00000021368	cnot6b	100	88.172	Paramormyrops_kingsleyae
ENSACAG00000016548	CNOT6	98	95.588	ENSPSIG00000017307	CNOT6	100	95.588	Pelodiscus_sinensis
ENSACAG00000016548	CNOT6	100	85.689	ENSPMGG00000011238	cnot6b	100	85.689	Periophthalmus_magnuspinnatus
ENSACAG00000016548	CNOT6	100	91.562	ENSPEMG00000000627	Cnot6	100	91.562	Peromyscus_maniculatus_bairdii
ENSACAG00000016548	CNOT6	100	94.434	ENSPCIG00000020319	CNOT6	99	94.434	Phascolarctos_cinereus
ENSACAG00000016548	CNOT6	100	86.559	ENSPFOG00000006291	cnot6b	100	86.559	Poecilia_formosa
ENSACAG00000016548	CNOT6	100	82.975	ENSPLAG00000008266	cnot6b	100	82.975	Poecilia_latipinna
ENSACAG00000016548	CNOT6	100	86.738	ENSPMEG00000009091	cnot6b	100	86.738	Poecilia_mexicana
ENSACAG00000016548	CNOT6	100	85.663	ENSPREG00000003713	cnot6b	100	85.663	Poecilia_reticulata
ENSACAG00000016548	CNOT6	100	92.998	ENSPPYG00000016137	CNOT6	100	92.998	Pongo_abelii
ENSACAG00000016548	CNOT6	71	90.602	ENSPCAG00000005599	-	71	90.602	Procavia_capensis
ENSACAG00000016548	CNOT6	100	87.792	ENSPCOG00000017359	CNOT6	100	88.510	Propithecus_coquereli
ENSACAG00000016548	CNOT6	100	89.587	ENSPVAG00000003069	CNOT6	100	89.587	Pteropus_vampyrus
ENSACAG00000016548	CNOT6	100	85.510	ENSPNYG00000000321	cnot6b	100	86.583	Pundamilia_nyererei
ENSACAG00000016548	CNOT6	100	85.305	ENSPNAG00000028816	cnot6b	100	85.305	Pygocentrus_nattereri
ENSACAG00000016548	CNOT6	100	86.738	ENSPNAG00000029586	cnot6a	100	86.738	Pygocentrus_nattereri
ENSACAG00000016548	CNOT6	100	91.382	ENSRNOG00000054891	Cnot6	100	91.382	Rattus_norvegicus
ENSACAG00000016548	CNOT6	100	92.998	ENSRBIG00000004309	CNOT6	100	92.998	Rhinopithecus_bieti
ENSACAG00000016548	CNOT6	100	92.998	ENSRROG00000035378	CNOT6	100	92.998	Rhinopithecus_roxellana
ENSACAG00000016548	CNOT6	100	93.178	ENSSBOG00000030494	CNOT6	100	93.178	Saimiri_boliviensis_boliviensis
ENSACAG00000016548	CNOT6	100	94.434	ENSSHAG00000017436	CNOT6	100	94.434	Sarcophilus_harrisii
ENSACAG00000016548	CNOT6	100	87.993	ENSSFOG00015015133	CNOT6	100	87.993	Scleropages_formosus
ENSACAG00000016548	CNOT6	100	86.918	ENSSFOG00015022383	cnot6a	96	86.918	Scleropages_formosus
ENSACAG00000016548	CNOT6	100	85.510	ENSSMAG00000003084	cnot6b	100	85.510	Scophthalmus_maximus
ENSACAG00000016548	CNOT6	100	86.762	ENSSDUG00000004151	cnot6b	100	86.762	Seriola_dumerili
ENSACAG00000016548	CNOT6	100	85.868	ENSSLDG00000004448	cnot6b	100	86.941	Seriola_lalandi_dorsalis
ENSACAG00000016548	CNOT6	64	74.022	ENSSARG00000012650	-	100	74.022	Sorex_araneus
ENSACAG00000016548	CNOT6	100	95.332	ENSSPUG00000007893	CNOT6	100	95.332	Sphenodon_punctatus
ENSACAG00000016548	CNOT6	100	87.478	ENSSPAG00000000149	cnot6b	100	87.478	Stegastes_partitus
ENSACAG00000016548	CNOT6	100	93.537	ENSSSCG00000014009	CNOT6	100	93.537	Sus_scrofa
ENSACAG00000016548	CNOT6	100	95.332	ENSTGUG00000001119	CNOT6	100	95.332	Taeniopygia_guttata
ENSACAG00000016548	CNOT6	100	84.560	ENSTRUG00000002818	cnot6b	100	84.560	Takifugu_rubripes
ENSACAG00000016548	CNOT6	100	85.099	ENSTNIG00000004443	cnot6b	99	85.099	Tetraodon_nigroviridis
ENSACAG00000016548	CNOT6	87	65.503	ENSTBEG00000017094	-	100	65.503	Tupaia_belangeri
ENSACAG00000016548	CNOT6	100	93.537	ENSTTRG00000009363	CNOT6	100	93.537	Tursiops_truncatus
ENSACAG00000016548	CNOT6	77	92.541	ENSUAMG00000004579	CNOT6	88	92.541	Ursus_americanus
ENSACAG00000016548	CNOT6	100	89.555	ENSUMAG00000024577	CNOT6	100	89.555	Ursus_maritimus
ENSACAG00000016548	CNOT6	83	91.892	ENSVPAG00000003593	CNOT6	83	91.892	Vicugna_pacos
ENSACAG00000016548	CNOT6	100	93.896	ENSVVUG00000026940	CNOT6	100	93.896	Vulpes_vulpes
ENSACAG00000016548	CNOT6	100	83.333	ENSXCOG00000003360	cnot6b	100	83.333	Xiphophorus_couchianus
ENSACAG00000016548	CNOT6	100	86.738	ENSXMAG00000008730	cnot6b	100	86.738	Xiphophorus_maculatus