EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000016658 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 8148 bases
Position: chr4:123583936-123592083
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000016397	MMR_HSR1	PF01926.23	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016722	-	570	-	ENSACAP00000016397	189 (aa)	-	G1KSX1

Gene Model

Click here to download ENSACAG00000016658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000016658	-	64	39.669	ENSACAG00000009125	RAB1B	86	39.669
ENSACAG00000016658	-	99	31.606	ENSACAG00000014318	RAB9B	96	31.606
ENSACAG00000016658	-	79	33.117	ENSACAG00000012345	-	76	33.117
ENSACAG00000016658	-	99	32.000	ENSACAG00000004479	RAB11A	92	32.000
ENSACAG00000016658	-	92	31.638	ENSACAG00000005993	RAB7A	84	31.638
ENSACAG00000016658	-	86	34.969	ENSACAG00000005694	RAB2A	72	36.842
ENSACAG00000016658	-	99	33.333	ENSACAG00000028613	-	88	33.333
ENSACAG00000016658	-	80	34.211	ENSACAG00000003034	RAB2B	73	34.211
ENSACAG00000016658	-	93	35.326	ENSACAG00000005463	-	89	35.326
ENSACAG00000016658	-	99	31.579	ENSACAG00000014624	RAB22A	96	31.579
ENSACAG00000016658	-	99	34.715	ENSACAG00000003643	RAB35	95	35.204
ENSACAG00000016658	-	81	30.323	ENSACAG00000011260	RAP2B	90	30.909
ENSACAG00000016658	-	95	30.939	ENSACAG00000002227	RAB33B	80	30.939
ENSACAG00000016658	-	99	31.606	ENSACAG00000001712	RAB9A	96	31.606
ENSACAG00000016658	-	81	34.641	ENSACAG00000008285	RAB14	71	34.641
ENSACAG00000016658	-	84	38.994	ENSACAG00000001098	RAB30	78	38.994
ENSACAG00000016658	-	83	42.949	ENSACAG00000016810	RAB3D	68	42.949
ENSACAG00000016658	-	84	30.000	ENSACAG00000017404	-	90	30.588
ENSACAG00000016658	-	99	35.751	ENSACAG00000001866	-	94	35.751
ENSACAG00000016658	-	99	34.555	ENSACAG00000000017	RAB5A	89	34.555
ENSACAG00000016658	-	99	32.461	ENSACAG00000005380	RAB5B	89	32.461
ENSACAG00000016658	-	82	56.129	ENSACAG00000009389	-	93	56.129
ENSACAG00000016658	-	60	31.304	ENSACAG00000013615	ARL4A	58	31.304
ENSACAG00000016658	-	84	39.375	ENSACAG00000003360	RAB12	62	39.375
ENSACAG00000016658	-	95	40.884	ENSACAG00000009008	RAB15	85	40.884
ENSACAG00000016658	-	75	34.014	ENSACAG00000008849	RAB33A	66	34.014
ENSACAG00000016658	-	79	30.667	ENSACAG00000016948	-	87	30.723
ENSACAG00000016658	-	86	39.264	ENSACAG00000015304	-	76	39.264
ENSACAG00000016658	-	74	33.571	ENSACAG00000006656	RAB23	63	35.333
ENSACAG00000016658	-	98	32.086	ENSACAG00000004554	RAB17	81	32.086
ENSACAG00000016658	-	80	43.046	ENSACAG00000028377	-	92	39.153
ENSACAG00000016658	-	83	30.573	ENSACAG00000003090	NRAS	85	31.138
ENSACAG00000016658	-	82	31.288	ENSACAG00000013300	ARL4D	81	31.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016658	-	69	55.000	ENSETEG00000008991	-	91	55.000	Echinops_telfairi
ENSACAG00000016658	-	99	61.702	ENSFALG00000003276	-	87	62.434	Ficedula_albicollis
ENSACAG00000016658	-	99	47.917	ENSGMOG00000018741	-	87	47.917	Gadus_morhua
ENSACAG00000016658	-	99	49.479	ENSGACG00000019767	-	93	49.479	Gasterosteus_aculeatus
ENSACAG00000016658	-	78	62.838	ENSLAFG00000000202	-	85	62.838	Loxodonta_africana
ENSACAG00000016658	-	99	58.911	ENSMGAG00000002516	-	89	58.911	Meleagris_gallopavo
ENSACAG00000016658	-	86	57.669	ENSMUSG00000064147	Rab44	62	57.669	Mus_musculus
ENSACAG00000016658	-	99	54.787	ENSMPUG00000014188	-	76	54.787	Mustela_putorius_furo
ENSACAG00000016658	-	75	59.028	ENSMLUG00000010706	-	80	59.028	Myotis_lucifugus
ENSACAG00000016658	-	69	61.871	ENSMEUG00000004712	-	93	61.871	Notamacropus_eugenii
ENSACAG00000016658	-	51	57.143	ENSOPRG00000006034	-	88	57.143	Ochotona_princeps
ENSACAG00000016658	-	82	52.258	ENSONIG00000011542	-	96	52.258	Oreochromis_niloticus
ENSACAG00000016658	-	82	77.419	ENSPSIG00000002522	-	100	77.419	Pelodiscus_sinensis
ENSACAG00000016658	-	69	57.554	ENSPVAG00000014624	-	91	57.554	Pteropus_vampyrus
ENSACAG00000016658	-	99	60.847	ENSTGUG00000017468	-	87	60.847	Taeniopygia_guttata
ENSACAG00000016658	-	82	52.258	ENSTNIG00000001448	-	92	52.258	Tetraodon_nigroviridis
ENSACAG00000016658	-	82	58.065	ENSTNIG00000008784	-	96	58.065	Tetraodon_nigroviridis