EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000016893 (Gene tree)
Gene ID: 100564752
Gene Symbol: -
Alias: -
Full Name: scaffold attachment factor B1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 27449 bases
Position: chrGL343717.1:6762-34210
Accession: 100564752
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000016648	RRM_5	PF13893.6	4.7e-07	1	1
ENSACAP00000016648	RRM_1	PF00076.22	3.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000016977	-	3189	XM_008122570	ENSACAP00000016648	758 (aa)	XP_008120777	H9GNQ8

Gene Model

Click here to download ENSACAG00000016893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000016893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000016893	-	95	52.168	ENSG00000160633	SAFB	80	70.161	Homo_sapiens
ENSACAG00000016893	-	96	43.478	ENSAPOG00000022508	safb	52	56.144	Acanthochromis_polyacanthus
ENSACAG00000016893	-	96	45.503	ENSAOCG00000006308	safb	52	56.044	Amphiprion_ocellaris
ENSACAG00000016893	-	96	44.094	ENSACLG00000001926	safb	50	58.145	Astatotilapia_calliptera
ENSACAG00000016893	-	95	51.200	ENSBTAG00000007875	SAFB	78	50.476	Bos_taurus
ENSACAG00000016893	-	73	61.408	ENSCJAG00000017081	SAFB	73	59.701	Callithrix_jacchus
ENSACAG00000016893	-	95	50.800	ENSCHIG00000007262	SAFB	78	50.068	Capra_hircus
ENSACAG00000016893	-	52	55.838	ENSTSYG00000001851	-	76	52.798	Carlito_syrichta
ENSACAG00000016893	-	87	46.200	ENSCHOG00000003208	SAFB	62	65.143	Choloepus_hoffmanni
ENSACAG00000016893	-	94	56.331	ENSCPBG00000010936	-	84	58.527	Chrysemys_picta_bellii
ENSACAG00000016893	-	95	54.313	ENSCPBG00000010928	-	84	55.862	Chrysemys_picta_bellii
ENSACAG00000016893	-	96	43.188	ENSCSEG00000019870	safb	50	57.820	Cynoglossus_semilaevis
ENSACAG00000016893	-	89	44.976	ENSCVAG00000002226	safb	61	56.250	Cyprinodon_variegatus
ENSACAG00000016893	-	96	42.583	ENSDARG00000020467	safb	55	46.087	Danio_rerio
ENSACAG00000016893	-	95	53.125	ENSDNOG00000015746	SAFB	51	60.221	Dasypus_novemcinctus
ENSACAG00000016893	-	50	65.297	ENSETEG00000018679	SAFB	52	59.286	Echinops_telfairi
ENSACAG00000016893	-	96	43.512	ENSELUG00000022327	safb	70	42.328	Esox_lucius
ENSACAG00000016893	-	71	55.497	ENSFALG00000013881	-	84	57.647	Ficedula_albicollis
ENSACAG00000016893	-	74	55.132	ENSGALG00000001948	-	79	59.391	Gallus_gallus
ENSACAG00000016893	-	75	53.002	ENSGALG00000013365	-	78	55.467	Gallus_gallus
ENSACAG00000016893	-	67	55.340	ENSGAGG00000017702	-	61	63.294	Gopherus_agassizii
ENSACAG00000016893	-	96	57.143	ENSGAGG00000008424	-	82	58.915	Gopherus_agassizii
ENSACAG00000016893	-	96	42.323	ENSLBEG00000006015	safb	52	56.432	Labrus_bergylta
ENSACAG00000016893	-	74	45.075	ENSLACG00000018090	SAFB	81	50.529	Latimeria_chalumnae
ENSACAG00000016893	-	96	48.307	ENSLOCG00000003613	safb	64	58.734	Lepisosteus_oculatus
ENSACAG00000016893	-	95	49.458	ENSMNEG00000035637	SAFB	63	56.459	Macaca_nemestrina
ENSACAG00000016893	-	96	44.603	ENSMZEG00005009120	safb	61	58.145	Maylandia_zebra
ENSACAG00000016893	-	75	53.158	ENSMGAG00000001101	-	81	55.600	Meleagris_gallopavo
ENSACAG00000016893	-	96	58.635	ENSMGAG00000001051	-	88	57.607	Meleagris_gallopavo
ENSACAG00000016893	-	94	43.709	ENSMICG00000046795	-	53	54.801	Microcebus_murinus
ENSACAG00000016893	-	96	51.921	ENSMODG00000001236	SAFB	78	49.668	Monodelphis_domestica
ENSACAG00000016893	-	96	42.572	ENSMALG00000020330	safb	50	58.371	Monopterus_albus
ENSACAG00000016893	-	74	48.983	MGP_PahariEiJ_G0020769	Safb	65	49.315	Mus_pahari
ENSACAG00000016893	-	95	52.168	ENSNLEG00000013551	SAFB	50	59.472	Nomascus_leucogenys
ENSACAG00000016893	-	74	47.834	ENSOPRG00000011561	-	50	58.753	Ochotona_princeps
ENSACAG00000016893	-	93	46.986	ENSOCUG00000014628	SAFB	50	53.271	Oryctolagus_cuniculus
ENSACAG00000016893	-	95	48.309	ENSOARG00000007856	-	99	48.098	Ovis_aries
ENSACAG00000016893	-	95	48.634	ENSOARG00000007662	-	78	48.497	Ovis_aries
ENSACAG00000016893	-	96	43.616	ENSPKIG00000009902	safb	50	57.562	Paramormyrops_kingsleyae
ENSACAG00000016893	-	96	59.947	ENSPSIG00000011679	-	83	61.200	Pelodiscus_sinensis
ENSACAG00000016893	-	96	53.034	ENSPSIG00000009367	-	79	53.765	Pelodiscus_sinensis
ENSACAG00000016893	-	93	44.790	ENSPFOG00000007745	safb	61	56.368	Poecilia_formosa
ENSACAG00000016893	-	68	53.275	ENSPMEG00000021023	safb	64	56.368	Poecilia_mexicana
ENSACAG00000016893	-	68	53.275	ENSPREG00000012496	safb	62	56.840	Poecilia_reticulata
ENSACAG00000016893	-	95	47.897	ENSPCAG00000006475	SAFB	64	52.758	Procavia_capensis
ENSACAG00000016893	-	95	51.012	ENSPVAG00000004913	SAFB	65	60.859	Pteropus_vampyrus
ENSACAG00000016893	-	76	62.260	ENSRBIG00000042509	SAFB	66	58.894	Rhinopithecus_bieti
ENSACAG00000016893	-	96	44.094	ENSSDUG00000009652	safb	62	58.371	Seriola_dumerili
ENSACAG00000016893	-	65	49.533	ENSSPUG00000009820	-	86	55.895	Sphenodon_punctatus
ENSACAG00000016893	-	69	47.201	ENSSPUG00000009747	-	88	45.772	Sphenodon_punctatus
ENSACAG00000016893	-	78	46.308	ENSSPAG00000015682	safb	58	57.203	Stegastes_partitus
ENSACAG00000016893	-	74	49.303	ENSSSCG00000013522	SAFB	53	60.235	Sus_scrofa
ENSACAG00000016893	-	74	57.904	ENSTGUG00000000489	-	84	59.396	Taeniopygia_guttata
ENSACAG00000016893	-	96	42.801	ENSTNIG00000015470	safb	51	56.872	Tetraodon_nigroviridis
ENSACAG00000016893	-	59	47.835	ENSUAMG00000024543	SAFB	52	60.096	Ursus_americanus
ENSACAG00000016893	-	70	54.469	ENSVPAG00000012043	SAFB	62	58.772	Vicugna_pacos
ENSACAG00000016893	-	68	52.174	ENSXMAG00000003458	safb	61	56.132	Xiphophorus_maculatus