EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000017008 (Gene tree)
Gene ID: 100558298
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 11188 bases
Position: chrGL343362.1:559789-570976
Accession: 100558298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000016761	RRM_1	PF00076.22	6.4e-12	1	1
ENSACAP00000016761	RRM_3	PF08777.11	1.1e-23	1	1
ENSACAP00000016761	La	PF05383.17	1.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000017091	SSB-201	1230	XM_003226258	ENSACAP00000016761	406 (aa)	XP_003226306	H9GNV5

Gene Model

Click here to download ENSACAG00000017008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000017008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000017008	SSB	99	66.829	ENSG00000138385	SSB	100	73.333	Homo_sapiens
ENSACAG00000017008	SSB	99	53.041	ENSAPOG00000003448	ssb	100	52.785	Acanthochromis_polyacanthus
ENSACAG00000017008	SSB	99	64.403	ENSAMEG00000010507	SSB	100	64.403	Ailuropoda_melanoleuca
ENSACAG00000017008	SSB	90	55.827	ENSACIG00000001738	ssb	95	56.077	Amphilophus_citrinellus
ENSACAG00000017008	SSB	99	53.285	ENSAOCG00000020398	ssb	100	53.269	Amphiprion_ocellaris
ENSACAG00000017008	SSB	99	53.771	ENSAPEG00000020395	ssb	100	53.753	Amphiprion_percula
ENSACAG00000017008	SSB	99	57.178	ENSATEG00000016884	ssb	100	57.421	Anabas_testudineus
ENSACAG00000017008	SSB	99	66.745	ENSAPLG00000006109	SSB	100	67.209	Anas_platyrhynchos
ENSACAG00000017008	SSB	99	60.494	ENSANAG00000027195	-	100	61.728	Aotus_nancymaae
ENSACAG00000017008	SSB	99	52.709	ENSACLG00000010798	ssb	100	52.956	Astatotilapia_calliptera
ENSACAG00000017008	SSB	97	53.580	ENSAMXG00000012606	ssb	100	53.865	Astyanax_mexicanus
ENSACAG00000017008	SSB	99	66.829	ENSBTAG00000008716	SSB	100	66.829	Bos_taurus
ENSACAG00000017008	SSB	73	35.526	WBGene00016653	C44E4.4	84	35.484	Caenorhabditis_elegans
ENSACAG00000017008	SSB	99	66.341	ENSCJAG00000045073	SSB	100	66.341	Callithrix_jacchus
ENSACAG00000017008	SSB	99	67.153	ENSCAFG00000012418	SSB	100	67.153	Canis_familiaris
ENSACAG00000017008	SSB	99	67.153	ENSCAFG00020002900	SSB	100	67.153	Canis_lupus_dingo
ENSACAG00000017008	SSB	99	63.300	ENSCHIG00000022196	-	100	63.054	Capra_hircus
ENSACAG00000017008	SSB	99	67.073	ENSCHIG00000022624	-	100	67.073	Capra_hircus
ENSACAG00000017008	SSB	99	66.341	ENSTSYG00000000097	SSB	100	66.341	Carlito_syrichta
ENSACAG00000017008	SSB	99	68.780	ENSCPOG00000003338	SSB	100	68.049	Cavia_porcellus
ENSACAG00000017008	SSB	99	67.317	ENSCCAG00000035147	SSB	100	67.073	Cebus_capucinus
ENSACAG00000017008	SSB	78	58.559	ENSCATG00000036701	SSB	93	58.559	Cercocebus_atys
ENSACAG00000017008	SSB	99	49.268	ENSCATG00000042909	-	100	47.073	Cercocebus_atys
ENSACAG00000017008	SSB	99	67.805	ENSCLAG00000015617	-	100	67.805	Chinchilla_lanigera
ENSACAG00000017008	SSB	99	67.073	ENSCSAG00000015200	SSB	89	67.073	Chlorocebus_sabaeus
ENSACAG00000017008	SSB	98	59.901	ENSCSAG00000018390	-	100	59.653	Chlorocebus_sabaeus
ENSACAG00000017008	SSB	99	68.049	ENSCHOG00000007763	SSB	100	68.049	Choloepus_hoffmanni
ENSACAG00000017008	SSB	99	73.171	ENSCPBG00000006519	SSB	100	73.171	Chrysemys_picta_bellii
ENSACAG00000017008	SSB	99	66.829	ENSCANG00000027695	SSB	100	66.829	Colobus_angolensis_palliatus
ENSACAG00000017008	SSB	99	57.561	ENSCANG00000033240	-	100	57.317	Colobus_angolensis_palliatus
ENSACAG00000017008	SSB	95	53.061	ENSCANG00000028838	-	92	52.296	Colobus_angolensis_palliatus
ENSACAG00000017008	SSB	99	59.952	ENSCGRG00001024831	Ssb	100	59.952	Cricetulus_griseus_chok1gshd
ENSACAG00000017008	SSB	99	59.952	ENSCGRG00000005387	Ssb	100	59.952	Cricetulus_griseus_crigri
ENSACAG00000017008	SSB	97	54.726	ENSCSEG00000011599	ssb	98	54.975	Cynoglossus_semilaevis
ENSACAG00000017008	SSB	99	54.854	ENSCVAG00000021558	ssb	100	54.854	Cyprinodon_variegatus
ENSACAG00000017008	SSB	98	53.808	ENSDARG00000029252	ssb	99	55.037	Danio_rerio
ENSACAG00000017008	SSB	99	67.073	ENSDNOG00000013450	SSB	100	67.073	Dasypus_novemcinctus
ENSACAG00000017008	SSB	99	60.577	ENSDORG00000005543	Ssb	100	61.538	Dipodomys_ordii
ENSACAG00000017008	SSB	83	33.903	FBgn0011638	La	85	32.961	Drosophila_melanogaster
ENSACAG00000017008	SSB	50	70.647	ENSETEG00000004614	-	52	70.647	Echinops_telfairi
ENSACAG00000017008	SSB	79	50.470	ENSEBUG00000001237	ssb	91	47.175	Eptatretus_burgeri
ENSACAG00000017008	SSB	99	67.561	ENSEASG00005022835	SSB	100	67.561	Equus_asinus_asinus
ENSACAG00000017008	SSB	99	67.805	ENSECAG00000018495	SSB	100	67.805	Equus_caballus
ENSACAG00000017008	SSB	75	56.536	ENSEEUG00000008077	SSB	78	55.229	Erinaceus_europaeus
ENSACAG00000017008	SSB	99	57.317	ENSELUG00000020929	ssb	100	57.561	Esox_lucius
ENSACAG00000017008	SSB	99	67.640	ENSFCAG00000011601	SSB	100	67.640	Felis_catus
ENSACAG00000017008	SSB	99	68.627	ENSFALG00000000930	SSB	100	69.175	Ficedula_albicollis
ENSACAG00000017008	SSB	99	68.293	ENSFDAG00000000598	SSB	100	68.293	Fukomys_damarensis
ENSACAG00000017008	SSB	71	52.333	ENSFHEG00000003268	ssb	92	52.685	Fundulus_heteroclitus
ENSACAG00000017008	SSB	97	53.186	ENSGMOG00000002664	ssb	99	52.088	Gadus_morhua
ENSACAG00000017008	SSB	99	70.617	ENSGALG00000009677	SSB	99	70.370	Gallus_gallus
ENSACAG00000017008	SSB	99	53.285	ENSGAFG00000002749	ssb	100	53.771	Gambusia_affinis
ENSACAG00000017008	SSB	99	52.278	ENSGACG00000005107	ssb	100	52.518	Gasterosteus_aculeatus
ENSACAG00000017008	SSB	99	73.659	ENSGAGG00000007807	SSB	100	73.659	Gopherus_agassizii
ENSACAG00000017008	SSB	99	55.718	ENSGGOG00000024891	-	99	55.718	Gorilla_gorilla
ENSACAG00000017008	SSB	54	62.667	ENSGGOG00000023471	-	91	62.667	Gorilla_gorilla
ENSACAG00000017008	SSB	99	52.709	ENSHBUG00000006584	ssb	100	52.956	Haplochromis_burtoni
ENSACAG00000017008	SSB	99	66.667	ENSHGLG00000017580	-	100	66.667	Heterocephalus_glaber_female
ENSACAG00000017008	SSB	99	61.463	ENSHGLG00000005832	-	100	60.488	Heterocephalus_glaber_female
ENSACAG00000017008	SSB	99	62.927	ENSHGLG00000004478	-	100	62.683	Heterocephalus_glaber_female
ENSACAG00000017008	SSB	99	66.667	ENSHGLG00100003084	-	100	66.667	Heterocephalus_glaber_male
ENSACAG00000017008	SSB	99	59.024	ENSHGLG00100008767	-	100	58.881	Heterocephalus_glaber_male
ENSACAG00000017008	SSB	97	52.369	ENSHCOG00000019011	ssb	99	53.616	Hippocampus_comes
ENSACAG00000017008	SSB	97	55.637	ENSIPUG00000003681	SSB	99	56.931	Ictalurus_punctatus
ENSACAG00000017008	SSB	99	66.504	ENSSTOG00000008416	SSB	100	66.504	Ictidomys_tridecemlineatus
ENSACAG00000017008	SSB	99	57.009	ENSJJAG00000023158	-	100	57.009	Jaculus_jaculus
ENSACAG00000017008	SSB	99	46.929	ENSJJAG00000016250	-	100	45.694	Jaculus_jaculus
ENSACAG00000017008	SSB	99	54.745	ENSKMAG00000017317	ssb	100	54.015	Kryptolebias_marmoratus
ENSACAG00000017008	SSB	99	53.771	ENSLBEG00000017345	ssb	100	52.798	Labrus_bergylta
ENSACAG00000017008	SSB	99	59.902	ENSLACG00000014056	SSB	99	60.147	Latimeria_chalumnae
ENSACAG00000017008	SSB	97	63.930	ENSLOCG00000007933	ssb	99	63.210	Lepisosteus_oculatus
ENSACAG00000017008	SSB	74	54.305	ENSLAFG00000026721	-	99	54.305	Loxodonta_africana
ENSACAG00000017008	SSB	99	58.025	ENSLAFG00000028909	-	100	58.025	Loxodonta_africana
ENSACAG00000017008	SSB	99	63.380	ENSLAFG00000000867	-	100	64.569	Loxodonta_africana
ENSACAG00000017008	SSB	87	58.496	ENSMFAG00000041478	-	100	57.660	Macaca_fascicularis
ENSACAG00000017008	SSB	99	66.829	ENSMFAG00000039066	SSB	100	66.829	Macaca_fascicularis
ENSACAG00000017008	SSB	99	46.569	ENSMMUG00000039889	-	100	45.833	Macaca_mulatta
ENSACAG00000017008	SSB	99	56.404	ENSMMUG00000011724	-	97	55.419	Macaca_mulatta
ENSACAG00000017008	SSB	99	66.829	ENSMMUG00000023051	SSB	100	66.829	Macaca_mulatta
ENSACAG00000017008	SSB	99	57.561	ENSMNEG00000028321	SSB	89	74.380	Macaca_nemestrina
ENSACAG00000017008	SSB	87	58.496	ENSMNEG00000034698	-	100	57.660	Macaca_nemestrina
ENSACAG00000017008	SSB	99	66.829	ENSMLEG00000035717	SSB	100	66.829	Mandrillus_leucophaeus
ENSACAG00000017008	SSB	99	47.783	ENSMLEG00000042644	-	100	47.044	Mandrillus_leucophaeus
ENSACAG00000017008	SSB	99	54.988	ENSMAMG00000004800	ssb	100	54.745	Mastacembelus_armatus
ENSACAG00000017008	SSB	99	52.709	ENSMZEG00005005749	ssb	100	52.956	Maylandia_zebra
ENSACAG00000017008	SSB	99	70.617	ENSMGAG00000010328	SSB	99	71.111	Meleagris_gallopavo
ENSACAG00000017008	SSB	99	67.402	ENSMICG00000028252	-	99	67.402	Microcebus_murinus
ENSACAG00000017008	SSB	98	62.312	ENSMICG00000033304	-	93	64.011	Microcebus_murinus
ENSACAG00000017008	SSB	99	63.333	ENSMODG00000008227	-	100	63.810	Monodelphis_domestica
ENSACAG00000017008	SSB	85	73.585	ENSMODG00000019271	-	99	73.585	Monodelphis_domestica
ENSACAG00000017008	SSB	99	53.171	ENSMODG00000007027	-	99	70.440	Monodelphis_domestica
ENSACAG00000017008	SSB	88	57.221	ENSMALG00000008045	ssb	88	57.493	Monopterus_albus
ENSACAG00000017008	SSB	99	59.112	MGP_CAROLIEiJ_G0023629	-	99	71.585	Mus_caroli
ENSACAG00000017008	SSB	99	58.411	ENSMUSG00000068882	Ssb	99	71.585	Mus_musculus
ENSACAG00000017008	SSB	99	58.711	MGP_PahariEiJ_G0025081	-	99	71.038	Mus_pahari
ENSACAG00000017008	SSB	99	58.411	MGP_SPRETEiJ_G0024551	Ssb	99	71.585	Mus_spretus
ENSACAG00000017008	SSB	99	68.049	ENSMPUG00000000785	SSB	100	68.049	Mustela_putorius_furo
ENSACAG00000017008	SSB	99	64.235	ENSMLUG00000016316	SSB	100	64.235	Myotis_lucifugus
ENSACAG00000017008	SSB	99	52.593	ENSNBRG00000012661	ssb	100	52.840	Neolamprologus_brichardi
ENSACAG00000017008	SSB	99	49.268	ENSNLEG00000028754	-	100	47.445	Nomascus_leucogenys
ENSACAG00000017008	SSB	99	66.829	ENSNLEG00000004958	SSB	100	66.829	Nomascus_leucogenys
ENSACAG00000017008	SSB	61	73.790	ENSMEUG00000001650	-	100	73.790	Notamacropus_eugenii
ENSACAG00000017008	SSB	71	52.234	ENSOPRG00000008475	-	100	51.546	Ochotona_princeps
ENSACAG00000017008	SSB	93	64.644	ENSODEG00000004202	-	100	64.644	Octodon_degus
ENSACAG00000017008	SSB	99	53.827	ENSONIG00000008776	ssb	100	54.074	Oreochromis_niloticus
ENSACAG00000017008	SSB	99	66.585	ENSOANG00000008543	SSB	100	66.829	Ornithorhynchus_anatinus
ENSACAG00000017008	SSB	99	67.153	ENSOCUG00000010396	SSB	100	68.049	Oryctolagus_cuniculus
ENSACAG00000017008	SSB	99	55.718	ENSORLG00000017208	ssb	100	55.961	Oryzias_latipes
ENSACAG00000017008	SSB	99	55.231	ENSORLG00020022574	ssb	100	55.231	Oryzias_latipes_hni
ENSACAG00000017008	SSB	99	55.961	ENSORLG00015016592	ssb	100	55.961	Oryzias_latipes_hsok
ENSACAG00000017008	SSB	99	55.366	ENSOMEG00000003193	ssb	100	55.366	Oryzias_melastigma
ENSACAG00000017008	SSB	99	63.232	ENSOGAG00000029768	SSB	100	62.529	Otolemur_garnettii
ENSACAG00000017008	SSB	99	67.317	ENSOARG00000002906	SSB	100	67.317	Ovis_aries
ENSACAG00000017008	SSB	99	55.718	ENSPPAG00000032427	-	100	66.667	Pan_paniscus
ENSACAG00000017008	SSB	99	66.829	ENSPPAG00000042673	SSB	100	66.829	Pan_paniscus
ENSACAG00000017008	SSB	96	53.453	ENSPPAG00000006189	-	91	54.958	Pan_paniscus
ENSACAG00000017008	SSB	99	67.640	ENSPPRG00000006599	SSB	100	67.640	Panthera_pardus
ENSACAG00000017008	SSB	99	67.640	ENSPTIG00000011021	SSB	97	67.640	Panthera_tigris_altaica
ENSACAG00000017008	SSB	99	66.829	ENSPTRG00000012620	SSB	100	66.829	Pan_troglodytes
ENSACAG00000017008	SSB	99	53.056	ENSPTRG00000042880	-	99	52.323	Pan_troglodytes
ENSACAG00000017008	SSB	99	48.276	ENSPANG00000034126	-	100	46.455	Papio_anubis
ENSACAG00000017008	SSB	95	48.062	ENSPANG00000031877	-	92	47.028	Papio_anubis
ENSACAG00000017008	SSB	99	66.829	ENSPANG00000007440	SSB	100	66.829	Papio_anubis
ENSACAG00000017008	SSB	99	60.000	ENSPKIG00000019325	ssb	99	60.000	Paramormyrops_kingsleyae
ENSACAG00000017008	SSB	99	70.732	ENSPSIG00000002265	SSB	93	71.220	Pelodiscus_sinensis
ENSACAG00000017008	SSB	87	50.138	ENSPMGG00000020075	ssb	89	53.293	Periophthalmus_magnuspinnatus
ENSACAG00000017008	SSB	98	45.455	ENSPMAG00000002982	ssb	100	44.988	Petromyzon_marinus
ENSACAG00000017008	SSB	99	67.883	ENSPCIG00000028591	-	100	68.370	Phascolarctos_cinereus
ENSACAG00000017008	SSB	99	54.745	ENSPFOG00000009650	ssb	100	54.745	Poecilia_formosa
ENSACAG00000017008	SSB	99	54.501	ENSPLAG00000020498	ssb	100	54.501	Poecilia_latipinna
ENSACAG00000017008	SSB	99	54.015	ENSPMEG00000001051	ssb	100	54.258	Poecilia_mexicana
ENSACAG00000017008	SSB	92	54.712	ENSPREG00000003708	ssb	96	55.435	Poecilia_reticulata
ENSACAG00000017008	SSB	99	66.829	ENSPPYG00000012919	SSB	100	66.829	Pongo_abelii
ENSACAG00000017008	SSB	94	64.175	ENSPCAG00000010276	SSB	100	65.206	Procavia_capensis
ENSACAG00000017008	SSB	99	64.390	ENSPCOG00000015741	-	100	64.390	Propithecus_coquereli
ENSACAG00000017008	SSB	99	59.268	ENSPCOG00000023189	-	100	59.268	Propithecus_coquereli
ENSACAG00000017008	SSB	86	68.839	ENSPVAG00000006615	SSB	97	69.795	Pteropus_vampyrus
ENSACAG00000017008	SSB	99	52.709	ENSPNYG00000006444	ssb	100	52.956	Pundamilia_nyererei
ENSACAG00000017008	SSB	97	54.975	ENSPNAG00000011708	ssb	100	55.961	Pygocentrus_nattereri
ENSACAG00000017008	SSB	99	59.080	ENSRNOG00000011606	AABR07061825.1	100	59.080	Rattus_norvegicus
ENSACAG00000017008	SSB	99	58.685	ENSRNOG00000007998	Ssb	100	58.685	Rattus_norvegicus
ENSACAG00000017008	SSB	99	56.627	ENSRBIG00000041972	SSB	88	76.522	Rhinopithecus_bieti
ENSACAG00000017008	SSB	94	56.429	ENSRBIG00000029918	-	100	48.175	Rhinopithecus_bieti
ENSACAG00000017008	SSB	87	61.972	ENSRBIG00000041608	-	96	61.972	Rhinopithecus_bieti
ENSACAG00000017008	SSB	93	54.922	ENSRBIG00000041232	-	98	53.627	Rhinopithecus_bieti
ENSACAG00000017008	SSB	99	66.829	ENSRROG00000040346	SSB	100	66.829	Rhinopithecus_roxellana
ENSACAG00000017008	SSB	98	55.583	ENSRROG00000031684	-	100	54.342	Rhinopithecus_roxellana
ENSACAG00000017008	SSB	99	54.988	ENSRROG00000007149	-	100	54.258	Rhinopithecus_roxellana
ENSACAG00000017008	SSB	97	59.453	ENSRROG00000034102	-	97	59.801	Rhinopithecus_roxellana
ENSACAG00000017008	SSB	99	67.073	ENSSBOG00000027204	SSB	100	67.073	Saimiri_boliviensis_boliviensis
ENSACAG00000017008	SSB	99	66.910	ENSSHAG00000018062	SSB	100	68.127	Sarcophilus_harrisii
ENSACAG00000017008	SSB	99	60.870	ENSSFOG00015000550	ssb	100	60.096	Scleropages_formosus
ENSACAG00000017008	SSB	97	53.807	ENSSMAG00000013885	ssb	98	56.911	Scophthalmus_maximus
ENSACAG00000017008	SSB	99	56.691	ENSSDUG00000020117	ssb	100	56.204	Seriola_dumerili
ENSACAG00000017008	SSB	99	54.167	ENSSLDG00000002525	ssb	100	53.398	Seriola_lalandi_dorsalis
ENSACAG00000017008	SSB	94	60.724	ENSSARG00000007747	SSB	100	60.724	Sorex_araneus
ENSACAG00000017008	SSB	99	70.660	ENSSPUG00000012112	SSB	100	71.638	Sphenodon_punctatus
ENSACAG00000017008	SSB	97	52.985	ENSSPAG00000005696	ssb	100	52.555	Stegastes_partitus
ENSACAG00000017008	SSB	89	60.383	ENSSSCG00000015938	SSB	91	59.615	Sus_scrofa
ENSACAG00000017008	SSB	99	69.118	ENSTGUG00000007942	SSB	100	68.856	Taeniopygia_guttata
ENSACAG00000017008	SSB	99	55.990	ENSTRUG00000017839	ssb	100	56.235	Takifugu_rubripes
ENSACAG00000017008	SSB	89	58.311	ENSTNIG00000000915	ssb	99	58.356	Tetraodon_nigroviridis
ENSACAG00000017008	SSB	82	76.522	ENSTBEG00000009056	SSB	81	76.522	Tupaia_belangeri
ENSACAG00000017008	SSB	99	67.153	ENSTTRG00000002152	SSB	100	66.180	Tursiops_truncatus
ENSACAG00000017008	SSB	92	69.312	ENSUAMG00000027833	SSB	99	69.312	Ursus_americanus
ENSACAG00000017008	SSB	99	67.883	ENSUMAG00000013907	SSB	100	67.883	Ursus_maritimus
ENSACAG00000017008	SSB	99	67.317	ENSVPAG00000007183	SSB	100	67.317	Vicugna_pacos
ENSACAG00000017008	SSB	99	67.153	ENSVVUG00000016573	SSB	78	67.153	Vulpes_vulpes
ENSACAG00000017008	SSB	99	55.425	ENSXETG00000025402	ssb	99	55.189	Xenopus_tropicalis
ENSACAG00000017008	SSB	92	53.281	ENSXCOG00000019109	ssb	97	59.398	Xiphophorus_couchianus
ENSACAG00000017008	SSB	99	54.501	ENSXMAG00000004888	ssb	100	54.501	Xiphophorus_maculatus