EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000017109 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 2258 bases
Position: chr2:142427709-142429966
Accession: 100566732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000019739	RRM_1	PF00076.22	5.7e-29	1	2
ENSACAP00000019739	RRM_1	PF00076.22	5.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000017172	-	1308	XM_008104890	ENSACAP00000019739	324 (aa)	XP_008103097	G1KX10

Gene Model

Click here to download ENSACAG00000017109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000017109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000017109	-	81	33.574	ENSACAG00000010416	HNRNPDL	52	32.941
ENSACAG00000017109	-	75	34.302	ENSACAG00000005366	-	100	35.465
ENSACAG00000017109	-	59	32.990	ENSACAG00000016946	HNRNPAB	52	35.294
ENSACAG00000017109	-	63	35.749	ENSACAG00000010342	HNRNPD	65	35.465
ENSACAG00000017109	-	55	58.427	ENSACAG00000007169	-	63	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000017109	-	55	61.667	ENSACIG00000021815	-	86	62.712	Amphilophus_citrinellus
ENSACAG00000017109	-	54	72.327	ENSATEG00000003423	-	76	71.875	Anabas_testudineus
ENSACAG00000017109	-	61	51.759	ENSATEG00000022918	hnrnpa1a	85	54.945	Anabas_testudineus
ENSACAG00000017109	-	91	44.781	ENSACLG00000006940	-	54	56.593	Astatotilapia_calliptera
ENSACAG00000017109	-	71	53.017	ENSCSEG00000007589	hnrnpa1a	67	57.143	Cynoglossus_semilaevis
ENSACAG00000017109	-	54	69.006	ENSCSEG00000014051	-	70	69.006	Cynoglossus_semilaevis
ENSACAG00000017109	-	64	50.455	ENSCVAG00000012637	hnrnpa1a	54	56.044	Cyprinodon_variegatus
ENSACAG00000017109	-	60	86.802	ENSDORG00000026425	-	54	88.360	Dipodomys_ordii
ENSACAG00000017109	-	55	56.983	ENSELUG00000007372	-	50	56.983	Esox_lucius
ENSACAG00000017109	-	56	65.385	ENSGMOG00000020353	-	93	66.480	Gadus_morhua
ENSACAG00000017109	-	65	51.584	ENSGAFG00000007751	-	54	56.593	Gambusia_affinis
ENSACAG00000017109	-	67	56.621	ENSGAFG00000016803	-	53	62.712	Gambusia_affinis
ENSACAG00000017109	-	64	54.438	ENSIPUG00000022440	-	83	55.488	Ictalurus_punctatus
ENSACAG00000017109	-	67	51.818	ENSIPUG00000002023	hnrnpa1a	68	55.866	Ictalurus_punctatus
ENSACAG00000017109	-	55	68.333	ENSIPUG00000001991	-	75	69.492	Ictalurus_punctatus
ENSACAG00000017109	-	81	44.518	ENSMFAG00000028351	-	57	49.744	Macaca_fascicularis
ENSACAG00000017109	-	83	44.444	ENSMAMG00000007606	-	54	55.495	Mastacembelus_armatus
ENSACAG00000017109	-	69	51.339	ENSMMOG00000008251	hnrnpa1a	76	55.495	Mola_mola
ENSACAG00000017109	-	54	63.277	ENSMALG00000008886	-	86	63.277	Monopterus_albus
ENSACAG00000017109	-	71	49.138	ENSMALG00000014091	hnrnpa1a	53	54.945	Monopterus_albus
ENSACAG00000017109	-	54	68.927	ENSNBRG00000014469	-	82	68.927	Neolamprologus_brichardi
ENSACAG00000017109	-	71	50.215	ENSNBRG00000018441	-	55	56.593	Neolamprologus_brichardi
ENSACAG00000017109	-	66	53.704	ENSORLG00000029240	-	96	56.180	Oryzias_latipes
ENSACAG00000017109	-	62	54.950	ENSORLG00020006043	-	61	58.791	Oryzias_latipes_hni
ENSACAG00000017109	-	65	50.345	ENSORLG00020022498	-	84	55.618	Oryzias_latipes_hni
ENSACAG00000017109	-	57	55.376	ENSORLG00020006582	hnrnpa1a	84	56.667	Oryzias_latipes_hni
ENSACAG00000017109	-	57	55.376	ENSORLG00015022294	-	51	56.593	Oryzias_latipes_hsok
ENSACAG00000017109	-	56	56.284	ENSPMGG00000011804	hnrnpa1a	63	61.333	Periophthalmus_magnuspinnatus
ENSACAG00000017109	-	63	66.851	ENSPMGG00000016392	-	93	68.571	Periophthalmus_magnuspinnatus
ENSACAG00000017109	-	65	50.893	ENSPFOG00000001825	-	54	56.593	Poecilia_formosa
ENSACAG00000017109	-	65	50.893	ENSPMEG00000002425	-	54	56.593	Poecilia_mexicana
ENSACAG00000017109	-	54	68.927	ENSPNYG00000020729	-	90	68.927	Pundamilia_nyererei
ENSACAG00000017109	-	56	55.978	ENSPNAG00000007752	hnrnpa1a	68	61.333	Pygocentrus_nattereri
ENSACAG00000017109	-	54	60.452	ENSSMAG00000010246	-	78	60.452	Scophthalmus_maximus
ENSACAG00000017109	-	67	50.459	ENSSMAG00000004641	hnrnpa1a	59	54.945	Scophthalmus_maximus
ENSACAG00000017109	-	54	70.060	ENSSMAG00000010279	-	94	70.060	Scophthalmus_maximus
ENSACAG00000017109	-	53	70.760	ENSSDUG00000002431	-	83	70.115	Seriola_dumerili
ENSACAG00000017109	-	77	49.603	ENSSDUG00000013908	hnrnpa1a	83	55.618	Seriola_dumerili
ENSACAG00000017109	-	80	45.594	ENSSLDG00000003718	hnrnpa1a	80	54.878	Seriola_lalandi_dorsalis
ENSACAG00000017109	-	71	49.138	ENSSPAG00000018518	-	71	48.291	Stegastes_partitus
ENSACAG00000017109	-	57	66.845	ENSTNIG00000007398	-	68	67.978	Tetraodon_nigroviridis
ENSACAG00000017109	-	70	52.838	ENSXCOG00000009001	-	90	52.153	Xiphophorus_couchianus
ENSACAG00000017109	-	67	44.944	ENSXMAG00000008076	-	53	56.044	Xiphophorus_maculatus