EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000017345 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 1681 bases
Position: chr1:198793459-198795139
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000021309	Exo_endo_phos	PF03372.23	3e-06	1	1
ENSACAP00000019103	Exo_endo_phos	PF03372.23	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000026427	-	1107	-	ENSACAP00000019103	369 (aa)	-	G1KW61
ENSACAT00000017401	-	1101	-	ENSACAP00000021309	367 (aa)	-	G1KZ04

Gene Model

Click here to download ENSACAG00000017345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000017345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000017345	-	85	62.300	ENSACAG00000023828	-	100	62.300
ENSACAG00000017345	-	85	30.462	ENSACAG00000027158	-	61	30.380
ENSACAG00000017345	-	79	43.564	ENSACAG00000022131	-	94	40.997
ENSACAG00000017345	-	80	30.921	ENSACAG00000022930	-	65	30.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000017345	-	75	30.000	ENSACLG00000001415	-	64	30.000	Astatotilapia_calliptera
ENSACAG00000017345	-	62	31.224	ENSACLG00000005243	-	92	31.224	Astatotilapia_calliptera
ENSACAG00000017345	-	64	30.522	ENSLACG00000003798	-	98	30.387	Latimeria_chalumnae
ENSACAG00000017345	-	62	30.165	ENSMZEG00005015499	-	84	30.165	Maylandia_zebra
ENSACAG00000017345	-	79	32.550	ENSMUSG00000090353	Gm17555	79	32.550	Mus_musculus
ENSACAG00000017345	-	81	30.945	ENSMUSG00000094030	Gm21833	60	30.945	Mus_musculus
ENSACAG00000017345	-	63	31.646	ENSNBRG00000020944	-	71	31.646	Neolamprologus_brichardi
ENSACAG00000017345	-	65	30.894	ENSORLG00015009902	-	84	30.894	Oryzias_latipes_hsok
ENSACAG00000017345	-	63	33.051	ENSOMEG00000005845	-	61	33.051	Oryzias_melastigma
ENSACAG00000017345	-	88	31.579	ENSXETG00000034095	-	74	30.205	Xenopus_tropicalis
ENSACAG00000017345	-	88	30.588	ENSXETG00000033765	-	74	30.588	Xenopus_tropicalis
ENSACAG00000017345	-	86	30.588	ENSXETG00000031535	-	74	30.294	Xenopus_tropicalis
ENSACAG00000017345	-	61	31.624	ENSXETG00000031013	-	97	31.169	Xenopus_tropicalis
ENSACAG00000017345	-	61	30.435	ENSXETG00000032255	-	99	30.435	Xenopus_tropicalis
ENSACAG00000017345	-	88	30.636	ENSXETG00000034064	-	75	30.636	Xenopus_tropicalis
ENSACAG00000017345	-	62	30.380	ENSXETG00000025636	-	99	30.802	Xenopus_tropicalis
ENSACAG00000017345	-	80	30.201	ENSXCOG00000009068	-	68	30.201	Xiphophorus_couchianus