EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000017848 (Gene tree)
Gene ID: 100567164
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 20092 bases
Position: chrGL343464.1:142174-162265
Accession: 100567164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000017575	PWI	PF01480.17	4.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000017921	SRRM1-201	6244	XM_003227193	ENSACAP00000017575	901 (aa)	XP_003227241	H9GPT3

Gene Model

Click here to download ENSACAG00000017848's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03013	RNA transport	KEGG
acs03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000017848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000017848	SRRM1	59	80.627	ENSGAGG00000009243	SRRM1	59	83.210	Gopherus_agassizii
ENSACAG00000017848	SRRM1	59	61.101	ENSMFAG00000038841	-	64	56.679	Macaca_fascicularis
ENSACAG00000017848	SRRM1	54	61.905	ENSMMUG00000039269	-	62	57.194	Macaca_mulatta
ENSACAG00000017848	SRRM1	54	60.714	ENSPANG00000035568	-	62	54.710	Papio_anubis
ENSACAG00000017848	SRRM1	57	68.571	ENSSARG00000013718	SRRM1	60	70.073	Sorex_araneus
ENSACAG00000017848	SRRM1	100	82.378	ENSSPUG00000015890	SRRM1	62	84.615	Sphenodon_punctatus