EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000022428 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 810 bases
Position: chrGL343266.1:233346-234155
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000021201	zf-CCHC	PF00098.23	1.1e-05	1	1
ENSACAP00000019644	zf-CCHC	PF00098.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000027601	-	705	-	ENSACAP00000021201	235 (aa)	-	H9GVA3
ENSACAT00000024467	-	747	-	ENSACAP00000019644	249 (aa)	-	H9GST3

Gene Model

Click here to download ENSACAG00000022428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000022428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000022428	-	97	83.270	ENSACAG00000028585	-	94	83.270
ENSACAG00000022428	-	96	90.795	ENSACAG00000027111	-	99	90.795
ENSACAG00000022428	-	100	85.532	ENSACAG00000027109	-	100	85.532
ENSACAG00000022428	-	94	80.444	ENSACAG00000001206	-	93	81.818
ENSACAG00000022428	-	100	83.830	ENSACAG00000022668	-	100	85.957
ENSACAG00000022428	-	100	81.893	ENSACAG00000024980	-	98	82.520
ENSACAG00000022428	-	97	95.633	ENSACAG00000024362	-	100	95.633
ENSACAG00000022428	-	100	94.468	ENSACAG00000028099	-	100	94.468
ENSACAG00000022428	-	100	81.893	ENSACAG00000025137	-	98	82.520
ENSACAG00000022428	-	91	75.111	ENSACAG00000023834	-	99	76.889
ENSACAG00000022428	-	100	85.106	ENSACAG00000023214	-	100	85.532
ENSACAG00000022428	-	100	85.106	ENSACAG00000024498	-	100	85.532
ENSACAG00000022428	-	99	82.836	ENSACAG00000028894	-	81	82.836
ENSACAG00000022428	-	95	82.143	ENSACAG00000023848	-	100	81.702
ENSACAG00000022428	-	90	89.381	ENSACAG00000025381	-	100	89.451
ENSACAG00000022428	-	96	88.703	ENSACAG00000023336	-	99	88.703
ENSACAG00000022428	-	99	82.772	ENSACAG00000029454	-	81	82.772
ENSACAG00000022428	-	100	82.008	ENSACAG00000026136	-	99	82.449
ENSACAG00000022428	-	95	83.550	ENSACAG00000026110	-	95	82.800
ENSACAG00000022428	-	100	85.106	ENSACAG00000026734	-	100	85.532
ENSACAG00000022428	-	91	79.535	ENSACAG00000005423	-	99	83.256
ENSACAG00000022428	-	100	79.149	ENSACAG00000027875	-	100	79.149
ENSACAG00000022428	-	99	77.966	ENSACAG00000028040	-	98	77.966
ENSACAG00000022428	-	97	95.041	ENSACAG00000022708	-	99	95.041
ENSACAG00000022428	-	95	80.804	ENSACAG00000023852	-	100	81.277
ENSACAG00000022428	-	100	83.830	ENSACAG00000027535	-	100	85.957
ENSACAG00000022428	-	100	81.481	ENSACAG00000024307	-	98	82.114
ENSACAG00000022428	-	99	82.836	ENSACAG00000029241	-	81	82.836
ENSACAG00000022428	-	100	87.234	ENSACAG00000024773	-	100	87.234
ENSACAG00000022428	-	100	87.234	ENSACAG00000025751	-	100	87.234
ENSACAG00000022428	-	100	80.658	ENSACAG00000023888	-	98	81.301
ENSACAG00000022428	-	100	91.489	ENSACAG00000026449	-	100	91.489
ENSACAG00000022428	-	100	84.681	ENSACAG00000022637	-	100	85.957
ENSACAG00000022428	-	100	91.489	ENSACAG00000026091	-	100	91.489
ENSACAG00000022428	-	96	72.614	ENSACAG00000027590	-	98	72.614
ENSACAG00000022428	-	100	83.404	ENSACAG00000027418	-	100	85.532
ENSACAG00000022428	-	100	83.404	ENSACAG00000025004	-	100	85.532
ENSACAG00000022428	-	100	84.255	ENSACAG00000023485	-	100	84.255
ENSACAG00000022428	-	96	87.866	ENSACAG00000023091	-	99	87.866
ENSACAG00000022428	-	99	82.906	ENSACAG00000024750	-	99	84.188
ENSACAG00000022428	-	100	97.447	ENSACAG00000026661	-	100	97.447
ENSACAG00000022428	-	95	77.778	ENSACAG00000026203	-	100	78.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000022428	-	89	32.900	ENSAMXG00000036244	-	62	32.900	Astyanax_mexicanus
ENSACAG00000022428	-	89	30.736	ENSAMXG00000042165	-	61	30.736	Astyanax_mexicanus
ENSACAG00000022428	-	99	30.738	ENSHCOG00000001473	-	73	31.890	Hippocampus_comes
ENSACAG00000022428	-	80	31.282	ENSLOCG00000010704	-	96	32.308	Lepisosteus_oculatus
ENSACAG00000022428	-	94	35.294	ENSMAMG00000007057	-	72	35.537	Mastacembelus_armatus
ENSACAG00000022428	-	93	30.303	ENSPREG00000001860	-	62	30.303	Poecilia_reticulata
ENSACAG00000022428	-	93	30.667	ENSPNAG00000011784	-	78	30.435	Pygocentrus_nattereri
ENSACAG00000022428	-	93	32.589	ENSPNAG00000026690	-	60	33.188	Pygocentrus_nattereri