EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000022748 (Gene tree)
Gene ID: 103278142
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF57.1
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 10283 bases
Position: chr2:199253127-199263409
Accession: 103278142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	1	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	2	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	3	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	4	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	5	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	6	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	7	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	8	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	9	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	10	11
ENSACAP00000020750	zf-C2H2	PF00096.26	6.3e-65	11	11
ENSACAP00000020750	zf-met	PF12874.7	0.00012	1	2
ENSACAP00000020750	zf-met	PF12874.7	0.00012	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000027504	-	4885	XM_008105944	ENSACAP00000020750	659 (aa)	XP_008104151	G1KYA1

Gene Model

Click here to download ENSACAG00000022748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000022748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000022748	-	63	45.515	ENSACAG00000024898	-	98	45.515
ENSACAG00000022748	-	97	52.787	ENSACAG00000025611	-	97	52.787
ENSACAG00000022748	-	67	52.208	ENSACAG00000013039	-	99	52.208
ENSACAG00000022748	-	62	45.161	ENSACAG00000022789	-	91	45.161
ENSACAG00000022748	-	69	48.819	ENSACAG00000013623	-	100	48.819
ENSACAG00000022748	-	95	52.618	ENSACAG00000008664	-	99	52.618
ENSACAG00000022748	-	67	46.438	ENSACAG00000015141	-	100	46.438
ENSACAG00000022748	-	69	55.051	ENSACAG00000000082	-	99	55.051
ENSACAG00000022748	-	83	51.908	ENSACAG00000026916	-	99	50.535
ENSACAG00000022748	-	62	55.642	ENSACAG00000025537	-	97	55.642
ENSACAG00000022748	-	60	43.529	ENSACAG00000026810	-	99	43.529
ENSACAG00000022748	-	62	52.542	ENSACAG00000029487	-	74	53.231
ENSACAG00000022748	-	78	44.939	ENSACAG00000024956	-	99	44.939
ENSACAG00000022748	-	62	54.926	ENSACAG00000026906	-	98	54.926
ENSACAG00000022748	-	61	57.091	ENSACAG00000027001	-	98	57.091
ENSACAG00000022748	-	63	55.611	ENSACAG00000022421	-	100	58.268

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000022748	-	61	53.876	ENSAMXG00000029109	-	86	53.876	Astyanax_mexicanus
ENSACAG00000022748	-	58	50.400	ENSAMXG00000038905	-	95	50.400	Astyanax_mexicanus
ENSACAG00000022748	-	65	51.703	ENSAMXG00000033201	-	96	51.703	Astyanax_mexicanus
ENSACAG00000022748	-	63	47.368	ENSNBRG00000016666	-	97	46.705	Neolamprologus_brichardi
ENSACAG00000022748	-	59	41.391	ENSPMAG00000007500	ZNF436	99	41.391	Petromyzon_marinus
ENSACAG00000022748	-	58	54.354	ENSPNAG00000017468	-	89	54.354	Pygocentrus_nattereri
ENSACAG00000022748	-	62	49.097	ENSPNAG00000021075	-	96	49.097	Pygocentrus_nattereri
ENSACAG00000022748	-	64	51.987	ENSPNAG00000009164	-	88	51.987	Pygocentrus_nattereri