EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000023898 (Gene tree)
Gene ID: 100560496
Gene Symbol: -
Alias: -
Full Name: exosome complex component RRP42
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 9527 bases
Position: chrAAWZ02038308:2615-12141
Accession: 100560496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000020132	RNase_PH_C	PF03725.15	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000023246	-	2049	XM_003230537	ENSACAP00000020132	150 (aa)	XP_003230585	H9GTJ1

Gene Model

Click here to download ENSACAG00000023898's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000023898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000023898	-	100	84.106	ENSG00000075914	EXOSC7	52	84.106	Homo_sapiens
ENSACAG00000023898	-	100	71.523	ENSAPOG00000023524	exosc7	52	71.523	Acanthochromis_polyacanthus
ENSACAG00000023898	-	100	82.781	ENSAMEG00000012111	EXOSC7	52	82.781	Ailuropoda_melanoleuca
ENSACAG00000023898	-	100	76.159	ENSACIG00000007168	exosc7	67	76.159	Amphilophus_citrinellus
ENSACAG00000023898	-	100	72.848	ENSAPEG00000009704	exosc7	52	72.848	Amphiprion_percula
ENSACAG00000023898	-	100	74.172	ENSATEG00000008157	exosc7	52	74.172	Anabas_testudineus
ENSACAG00000023898	-	100	88.079	ENSAPLG00000012218	EXOSC7	69	88.079	Anas_platyrhynchos
ENSACAG00000023898	-	100	82.781	ENSANAG00000028607	EXOSC7	52	82.781	Aotus_nancymaae
ENSACAG00000023898	-	100	74.834	ENSACLG00000007428	exosc7	52	74.834	Astatotilapia_calliptera
ENSACAG00000023898	-	100	82.781	ENSBTAG00000018329	EXOSC7	52	82.781	Bos_taurus
ENSACAG00000023898	-	91	30.818	WBGene00009289	exos-7	51	30.818	Caenorhabditis_elegans
ENSACAG00000023898	-	100	83.444	ENSCJAG00000001928	EXOSC7	52	83.444	Callithrix_jacchus
ENSACAG00000023898	-	100	82.781	ENSCAFG00000014055	EXOSC7	52	82.781	Canis_familiaris
ENSACAG00000023898	-	100	82.781	ENSCAFG00020013315	EXOSC7	52	82.781	Canis_lupus_dingo
ENSACAG00000023898	-	100	83.444	ENSCHIG00000012995	EXOSC7	52	83.444	Capra_hircus
ENSACAG00000023898	-	100	84.768	ENSTSYG00000012043	EXOSC7	52	84.768	Carlito_syrichta
ENSACAG00000023898	-	100	81.457	ENSCAPG00000016467	EXOSC7	52	81.457	Cavia_aperea
ENSACAG00000023898	-	100	80.795	ENSCPOG00000004937	EXOSC7	52	80.795	Cavia_porcellus
ENSACAG00000023898	-	100	84.106	ENSCCAG00000028936	EXOSC7	52	84.106	Cebus_capucinus
ENSACAG00000023898	-	100	84.106	ENSCATG00000036675	EXOSC7	52	84.106	Cercocebus_atys
ENSACAG00000023898	-	100	84.768	ENSCLAG00000015083	EXOSC7	52	84.768	Chinchilla_lanigera
ENSACAG00000023898	-	100	84.106	ENSCSAG00000016390	EXOSC7	52	84.106	Chlorocebus_sabaeus
ENSACAG00000023898	-	100	63.576	ENSCHOG00000001353	EXOSC7	52	63.576	Choloepus_hoffmanni
ENSACAG00000023898	-	100	88.742	ENSCPBG00000023202	EXOSC7	52	88.742	Chrysemys_picta_bellii
ENSACAG00000023898	-	99	56.000	ENSCING00000004774	-	52	56.000	Ciona_intestinalis
ENSACAG00000023898	-	99	55.333	ENSCSAVG00000009360	-	52	55.333	Ciona_savignyi
ENSACAG00000023898	-	100	85.430	ENSCANG00000041919	EXOSC7	53	85.430	Colobus_angolensis_palliatus
ENSACAG00000023898	-	100	82.781	ENSCGRG00001000938	Exosc7	52	82.781	Cricetulus_griseus_chok1gshd
ENSACAG00000023898	-	100	82.781	ENSCGRG00000006887	Exosc7	56	82.781	Cricetulus_griseus_crigri
ENSACAG00000023898	-	100	71.523	ENSCSEG00000011080	exosc7	52	71.523	Cynoglossus_semilaevis
ENSACAG00000023898	-	100	72.848	ENSCVAG00000000739	exosc7	52	72.848	Cyprinodon_variegatus
ENSACAG00000023898	-	100	75.497	ENSDARG00000100060	exosc7	52	75.497	Danio_rerio
ENSACAG00000023898	-	100	83.444	ENSDNOG00000007964	EXOSC7	52	83.444	Dasypus_novemcinctus
ENSACAG00000023898	-	100	83.444	ENSDORG00000024905	Exosc7	57	83.444	Dipodomys_ordii
ENSACAG00000023898	-	99	39.355	FBgn0034065	Rrp42	52	39.355	Drosophila_melanogaster
ENSACAG00000023898	-	100	57.616	ENSEBUG00000001206	exosc7	67	57.616	Eptatretus_burgeri
ENSACAG00000023898	-	100	86.093	ENSEASG00005008039	EXOSC7	52	86.093	Equus_asinus_asinus
ENSACAG00000023898	-	100	86.755	ENSECAG00000006539	EXOSC7	52	86.755	Equus_caballus
ENSACAG00000023898	-	100	74.834	ENSELUG00000007128	exosc7	52	74.834	Esox_lucius
ENSACAG00000023898	-	100	84.768	ENSFCAG00000013344	EXOSC7	52	84.768	Felis_catus
ENSACAG00000023898	-	100	87.417	ENSFALG00000002600	EXOSC7	52	87.417	Ficedula_albicollis
ENSACAG00000023898	-	100	81.457	ENSFDAG00000012581	EXOSC7	52	81.457	Fukomys_damarensis
ENSACAG00000023898	-	100	72.848	ENSFHEG00000009565	exosc7	52	72.848	Fundulus_heteroclitus
ENSACAG00000023898	-	100	70.199	ENSGMOG00000007935	exosc7	52	70.199	Gadus_morhua
ENSACAG00000023898	-	100	85.430	ENSGALG00000030084	EXOSC7	52	85.430	Gallus_gallus
ENSACAG00000023898	-	99	72.667	ENSGAFG00000003112	exosc7	52	72.667	Gambusia_affinis
ENSACAG00000023898	-	100	70.199	ENSGACG00000003085	exosc7	52	70.199	Gasterosteus_aculeatus
ENSACAG00000023898	-	100	84.106	ENSGGOG00000013497	EXOSC7	54	84.106	Gorilla_gorilla
ENSACAG00000023898	-	100	74.172	ENSHBUG00000009582	exosc7	54	74.172	Haplochromis_burtoni
ENSACAG00000023898	-	100	81.457	ENSHGLG00000012984	EXOSC7	52	81.457	Heterocephalus_glaber_female
ENSACAG00000023898	-	100	82.119	ENSHGLG00100005220	EXOSC7	52	82.119	Heterocephalus_glaber_male
ENSACAG00000023898	-	100	71.523	ENSHCOG00000007761	exosc7	52	71.523	Hippocampus_comes
ENSACAG00000023898	-	100	73.510	ENSIPUG00000012381	exosc7	52	73.510	Ictalurus_punctatus
ENSACAG00000023898	-	100	85.430	ENSSTOG00000005892	EXOSC7	52	85.430	Ictidomys_tridecemlineatus
ENSACAG00000023898	-	100	82.119	ENSJJAG00000010398	Exosc7	52	82.119	Jaculus_jaculus
ENSACAG00000023898	-	100	72.185	ENSKMAG00000012799	exosc7	52	72.185	Kryptolebias_marmoratus
ENSACAG00000023898	-	100	73.510	ENSLBEG00000027540	exosc7	52	73.510	Labrus_bergylta
ENSACAG00000023898	-	100	80.132	ENSLACG00000012065	EXOSC7	52	82.119	Latimeria_chalumnae
ENSACAG00000023898	-	100	73.510	ENSLOCG00000002116	exosc7	52	73.510	Lepisosteus_oculatus
ENSACAG00000023898	-	100	85.430	ENSLAFG00000012738	EXOSC7	52	85.430	Loxodonta_africana
ENSACAG00000023898	-	100	84.106	ENSMFAG00000038326	EXOSC7	52	84.106	Macaca_fascicularis
ENSACAG00000023898	-	100	84.106	ENSMMUG00000019130	EXOSC7	52	84.106	Macaca_mulatta
ENSACAG00000023898	-	100	84.106	ENSMNEG00000041567	EXOSC7	52	84.106	Macaca_nemestrina
ENSACAG00000023898	-	100	84.106	ENSMLEG00000039510	EXOSC7	52	84.106	Mandrillus_leucophaeus
ENSACAG00000023898	-	100	74.172	ENSMAMG00000002527	exosc7	52	74.172	Mastacembelus_armatus
ENSACAG00000023898	-	100	74.834	ENSMZEG00005026454	exosc7	52	74.834	Maylandia_zebra
ENSACAG00000023898	-	100	85.430	ENSMGAG00000011656	EXOSC7	52	85.430	Meleagris_gallopavo
ENSACAG00000023898	-	100	84.106	ENSMAUG00000016964	Exosc7	52	84.106	Mesocricetus_auratus
ENSACAG00000023898	-	100	84.768	ENSMICG00000049103	EXOSC7	52	84.768	Microcebus_murinus
ENSACAG00000023898	-	100	82.781	ENSMOCG00000014605	Exosc7	52	82.781	Microtus_ochrogaster
ENSACAG00000023898	-	99	74.000	ENSMMOG00000014984	exosc7	52	74.000	Mola_mola
ENSACAG00000023898	-	100	86.093	ENSMODG00000011261	EXOSC7	52	86.093	Monodelphis_domestica
ENSACAG00000023898	-	100	73.510	ENSMALG00000009471	exosc7	52	73.510	Monopterus_albus
ENSACAG00000023898	-	100	82.119	MGP_CAROLIEiJ_G0032854	Exosc7	52	82.119	Mus_caroli
ENSACAG00000023898	-	100	82.119	ENSMUSG00000025785	Exosc7	52	82.119	Mus_musculus
ENSACAG00000023898	-	100	82.119	MGP_PahariEiJ_G0015720	Exosc7	52	82.119	Mus_pahari
ENSACAG00000023898	-	100	82.119	MGP_SPRETEiJ_G0034002	Exosc7	52	82.119	Mus_spretus
ENSACAG00000023898	-	100	79.470	ENSMLUG00000014256	EXOSC7	52	79.470	Myotis_lucifugus
ENSACAG00000023898	-	100	83.444	ENSNGAG00000018736	Exosc7	52	83.444	Nannospalax_galili
ENSACAG00000023898	-	100	74.834	ENSNBRG00000000047	EXOSC7	67	74.834	Neolamprologus_brichardi
ENSACAG00000023898	-	100	74.834	ENSNBRG00000018223	exosc7	52	74.834	Neolamprologus_brichardi
ENSACAG00000023898	-	100	84.768	ENSNLEG00000006027	EXOSC7	52	84.768	Nomascus_leucogenys
ENSACAG00000023898	-	100	85.430	ENSMEUG00000013026	EXOSC7	56	85.430	Notamacropus_eugenii
ENSACAG00000023898	-	100	83.444	ENSOPRG00000016637	EXOSC7	64	83.444	Ochotona_princeps
ENSACAG00000023898	-	100	82.781	ENSODEG00000011518	EXOSC7	52	82.781	Octodon_degus
ENSACAG00000023898	-	100	75.497	ENSONIG00000019664	exosc7	52	75.497	Oreochromis_niloticus
ENSACAG00000023898	-	100	82.119	ENSOANG00000006807	EXOSC7	55	82.119	Ornithorhynchus_anatinus
ENSACAG00000023898	-	100	82.119	ENSOCUG00000000939	EXOSC7	52	82.119	Oryctolagus_cuniculus
ENSACAG00000023898	-	100	72.185	ENSORLG00000002251	exosc7	52	72.185	Oryzias_latipes
ENSACAG00000023898	-	100	72.185	ENSORLG00020008788	exosc7	52	72.185	Oryzias_latipes_hni
ENSACAG00000023898	-	100	72.185	ENSORLG00015015968	exosc7	52	72.185	Oryzias_latipes_hsok
ENSACAG00000023898	-	100	70.861	ENSOMEG00000007979	exosc7	52	70.861	Oryzias_melastigma
ENSACAG00000023898	-	100	83.444	ENSOGAG00000001011	EXOSC7	52	83.444	Otolemur_garnettii
ENSACAG00000023898	-	100	82.781	ENSOARG00000011298	EXOSC7	52	82.781	Ovis_aries
ENSACAG00000023898	-	100	84.106	ENSPPAG00000043557	EXOSC7	53	84.106	Pan_paniscus
ENSACAG00000023898	-	100	84.106	ENSPPRG00000006919	EXOSC7	52	84.106	Panthera_pardus
ENSACAG00000023898	-	100	84.106	ENSPTIG00000013985	EXOSC7	52	84.106	Panthera_tigris_altaica
ENSACAG00000023898	-	100	84.106	ENSPTRG00000014830	EXOSC7	53	84.106	Pan_troglodytes
ENSACAG00000023898	-	100	84.106	ENSPANG00000012918	EXOSC7	52	84.106	Papio_anubis
ENSACAG00000023898	-	100	72.848	ENSPKIG00000014229	exosc7	52	72.848	Paramormyrops_kingsleyae
ENSACAG00000023898	-	100	88.079	ENSPSIG00000010902	EXOSC7	56	88.079	Pelodiscus_sinensis
ENSACAG00000023898	-	100	72.848	ENSPMGG00000023830	exosc7	52	72.848	Periophthalmus_magnuspinnatus
ENSACAG00000023898	-	100	83.444	ENSPEMG00000022845	Exosc7	52	83.444	Peromyscus_maniculatus_bairdii
ENSACAG00000023898	-	100	68.212	ENSPMAG00000009427	exosc7	51	68.212	Petromyzon_marinus
ENSACAG00000023898	-	100	85.430	ENSPCIG00000025150	EXOSC7	52	85.430	Phascolarctos_cinereus
ENSACAG00000023898	-	100	73.510	ENSPFOG00000005301	exosc7	52	73.510	Poecilia_formosa
ENSACAG00000023898	-	100	63.576	ENSPLAG00000016410	exosc7	50	63.576	Poecilia_latipinna
ENSACAG00000023898	-	100	72.185	ENSPMEG00000019419	exosc7	52	72.185	Poecilia_mexicana
ENSACAG00000023898	-	73	74.545	ENSPREG00000017921	exosc7	52	74.545	Poecilia_reticulata
ENSACAG00000023898	-	100	84.106	ENSPPYG00000013949	-	52	84.106	Pongo_abelii
ENSACAG00000023898	-	100	84.106	ENSPCAG00000001772	EXOSC7	52	84.106	Procavia_capensis
ENSACAG00000023898	-	100	85.430	ENSPCOG00000024892	EXOSC7	56	85.430	Propithecus_coquereli
ENSACAG00000023898	-	100	81.457	ENSPVAG00000012445	EXOSC7	52	81.457	Pteropus_vampyrus
ENSACAG00000023898	-	100	74.834	ENSPNYG00000016020	exosc7	52	74.834	Pundamilia_nyererei
ENSACAG00000023898	-	100	74.834	ENSPNAG00000015645	exosc7	52	74.834	Pygocentrus_nattereri
ENSACAG00000023898	-	100	82.781	ENSRNOG00000060337	Exosc7	52	82.781	Rattus_norvegicus
ENSACAG00000023898	-	100	84.106	ENSRBIG00000040862	EXOSC7	52	84.106	Rhinopithecus_bieti
ENSACAG00000023898	-	100	84.106	ENSRROG00000038150	EXOSC7	52	84.106	Rhinopithecus_roxellana
ENSACAG00000023898	-	100	82.781	ENSSBOG00000032667	EXOSC7	52	82.781	Saimiri_boliviensis_boliviensis
ENSACAG00000023898	-	100	86.093	ENSSHAG00000003370	EXOSC7	51	86.093	Sarcophilus_harrisii
ENSACAG00000023898	-	100	73.510	ENSSFOG00015022389	exosc7	52	73.510	Scleropages_formosus
ENSACAG00000023898	-	100	72.848	ENSSMAG00000020361	exosc7	52	72.848	Scophthalmus_maximus
ENSACAG00000023898	-	100	74.834	ENSSDUG00000019570	exosc7	52	74.834	Seriola_dumerili
ENSACAG00000023898	-	100	74.172	ENSSLDG00000024102	exosc7	52	74.172	Seriola_lalandi_dorsalis
ENSACAG00000023898	-	100	84.768	ENSSARG00000005380	EXOSC7	53	84.768	Sorex_araneus
ENSACAG00000023898	-	100	90.066	ENSSPUG00000011166	EXOSC7	52	90.066	Sphenodon_punctatus
ENSACAG00000023898	-	100	71.523	ENSSPAG00000004284	exosc7	52	71.523	Stegastes_partitus
ENSACAG00000023898	-	100	84.768	ENSSSCG00000011300	EXOSC7	52	84.768	Sus_scrofa
ENSACAG00000023898	-	100	86.093	ENSTGUG00000004961	EXOSC7	53	86.093	Taeniopygia_guttata
ENSACAG00000023898	-	100	71.523	ENSTRUG00000008320	exosc7	52	71.523	Takifugu_rubripes
ENSACAG00000023898	-	100	72.848	ENSTNIG00000003617	exosc7	52	72.848	Tetraodon_nigroviridis
ENSACAG00000023898	-	100	83.444	ENSTTRG00000007189	EXOSC7	52	83.444	Tursiops_truncatus
ENSACAG00000023898	-	100	82.781	ENSUAMG00000004308	EXOSC7	62	82.781	Ursus_americanus
ENSACAG00000023898	-	100	83.444	ENSUMAG00000005714	EXOSC7	53	83.444	Ursus_maritimus
ENSACAG00000023898	-	100	84.106	ENSVPAG00000004346	EXOSC7	62	84.106	Vicugna_pacos
ENSACAG00000023898	-	100	83.444	ENSVVUG00000007036	EXOSC7	52	83.444	Vulpes_vulpes
ENSACAG00000023898	-	99	78.667	ENSXETG00000020144	exosc7	52	78.667	Xenopus_tropicalis
ENSACAG00000023898	-	100	72.185	ENSXCOG00000019573	exosc7	67	72.185	Xiphophorus_couchianus
ENSACAG00000023898	-	100	73.510	ENSXMAG00000014296	exosc7	52	73.510	Xiphophorus_maculatus