EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000024956 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 19177 bases
Position: chrGL343907.1:52128-71304
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	1	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	2	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	3	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	4	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	5	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	6	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	7	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	8	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	9	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	10	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	11	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	12	13
ENSACAP00000020169	zf-C2H2	PF00096.26	1e-68	13	13
ENSACAP00000020169	zf-met	PF12874.7	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000027111	-	1536	-	ENSACAP00000020169	512 (aa)	-	H9GTK9

Gene Model

Click here to download ENSACAG00000024956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000024956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000024956	-	77	50.508	ENSACAG00000000082	-	99	50.508
ENSACAG00000024956	-	82	36.585	ENSACAG00000003465	ZNF574	61	36.364
ENSACAG00000024956	-	85	41.762	ENSACAG00000026810	-	99	41.762
ENSACAG00000024956	-	78	48.082	ENSACAG00000013039	-	99	48.082
ENSACAG00000024956	-	99	44.939	ENSACAG00000022748	-	78	44.939
ENSACAG00000024956	-	83	40.640	ENSACAG00000022789	-	91	40.047
ENSACAG00000024956	-	78	48.673	ENSACAG00000029487	-	75	48.673
ENSACAG00000024956	-	94	43.142	ENSACAG00000015141	-	99	43.142
ENSACAG00000024956	-	78	36.790	ENSACAG00000012999	PRDM5	73	36.790
ENSACAG00000024956	-	78	49.458	ENSACAG00000024898	-	98	49.458
ENSACAG00000024956	-	99	40.138	ENSACAG00000025611	-	77	40.138
ENSACAG00000024956	-	77	46.602	ENSACAG00000013623	-	100	46.602
ENSACAG00000024956	-	79	46.193	ENSACAG00000008664	-	68	46.193
ENSACAG00000024956	-	77	50.148	ENSACAG00000027001	-	99	49.143
ENSACAG00000024956	-	77	49.603	ENSACAG00000025537	-	100	49.603
ENSACAG00000024956	-	99	45.685	ENSACAG00000026916	-	99	45.685
ENSACAG00000024956	-	83	48.731	ENSACAG00000022421	-	100	49.492
ENSACAG00000024956	-	77	49.109	ENSACAG00000026906	-	99	49.109
ENSACAG00000024956	-	82	39.367	ENSACAG00000011023	ZNF628	63	48.951

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000024956	-	78	41.262	ENSAMXG00000035246	-	72	41.262	Astyanax_mexicanus
ENSACAG00000024956	-	81	49.635	ENSAMXG00000038325	-	99	50.890	Astyanax_mexicanus
ENSACAG00000024956	-	81	50.178	ENSAMXG00000025452	-	98	52.964	Astyanax_mexicanus
ENSACAG00000024956	-	70	51.531	ENSAMXG00000038536	-	97	51.531	Astyanax_mexicanus
ENSACAG00000024956	-	70	50.820	ENSAMXG00000042746	-	97	50.820	Astyanax_mexicanus
ENSACAG00000024956	-	77	53.476	ENSAMXG00000038636	-	99	53.476	Astyanax_mexicanus
ENSACAG00000024956	-	82	50.134	ENSAMXG00000034847	-	90	50.134	Astyanax_mexicanus
ENSACAG00000024956	-	77	54.435	ENSAMXG00000036233	-	82	54.435	Astyanax_mexicanus
ENSACAG00000024956	-	78	49.813	ENSAMXG00000034344	-	77	49.813	Astyanax_mexicanus
ENSACAG00000024956	-	77	50.255	ENSAMXG00000010805	-	95	50.255	Astyanax_mexicanus
ENSACAG00000024956	-	78	52.308	ENSAMXG00000032841	-	77	52.308	Astyanax_mexicanus
ENSACAG00000024956	-	77	53.097	ENSAMXG00000042784	-	92	53.097	Astyanax_mexicanus
ENSACAG00000024956	-	78	43.243	ENSBTAG00000038322	-	79	43.243	Bos_taurus
ENSACAG00000024956	-	77	51.923	ENSCPBG00000026433	-	60	51.923	Chrysemys_picta_bellii
ENSACAG00000024956	-	77	42.525	ENSCPBG00000001526	-	80	42.525	Chrysemys_picta_bellii
ENSACAG00000024956	-	79	42.088	ENSCPBG00000013652	-	68	43.066	Chrysemys_picta_bellii
ENSACAG00000024956	-	93	46.460	ENSCPBG00000008580	-	100	48.879	Chrysemys_picta_bellii
ENSACAG00000024956	-	78	39.286	ENSCSAVG00000010960	-	100	40.244	Ciona_savignyi
ENSACAG00000024956	-	82	43.612	ENSDNOG00000047495	-	94	43.612	Dasypus_novemcinctus
ENSACAG00000024956	-	78	45.645	ENSEBUG00000012919	-	73	44.142	Eptatretus_burgeri
ENSACAG00000024956	-	77	43.979	ENSEBUG00000002075	-	80	42.439	Eptatretus_burgeri
ENSACAG00000024956	-	77	38.325	ENSEBUG00000014717	-	76	38.325	Eptatretus_burgeri
ENSACAG00000024956	-	77	45.545	ENSEBUG00000011435	-	83	45.545	Eptatretus_burgeri
ENSACAG00000024956	-	83	44.291	ENSEBUG00000015837	-	84	44.291	Eptatretus_burgeri
ENSACAG00000024956	-	77	43.360	ENSEBUG00000008306	-	76	43.360	Eptatretus_burgeri
ENSACAG00000024956	-	94	40.488	ENSEBUG00000005264	-	83	40.488	Eptatretus_burgeri
ENSACAG00000024956	-	79	34.118	ENSEBUG00000013875	-	86	34.118	Eptatretus_burgeri
ENSACAG00000024956	-	78	43.382	ENSEBUG00000011694	-	96	43.382	Eptatretus_burgeri
ENSACAG00000024956	-	79	43.750	ENSEASG00005004469	-	85	43.750	Equus_asinus_asinus
ENSACAG00000024956	-	82	48.649	ENSFHEG00000004382	-	66	48.649	Fundulus_heteroclitus
ENSACAG00000024956	-	77	38.692	ENSGMOG00000018506	-	100	38.692	Gadus_morhua
ENSACAG00000024956	-	77	47.126	ENSGALG00000055127	-	73	47.126	Gallus_gallus
ENSACAG00000024956	-	80	54.380	ENSGALG00000046336	-	99	54.380	Gallus_gallus
ENSACAG00000024956	-	77	49.326	ENSGALG00000054325	-	98	49.326	Gallus_gallus
ENSACAG00000024956	-	78	40.573	ENSGALG00000053507	-	84	41.766	Gallus_gallus
ENSACAG00000024956	-	77	44.170	ENSGALG00000049609	-	58	44.170	Gallus_gallus
ENSACAG00000024956	-	99	52.555	ENSGALG00000044069	-	80	52.555	Gallus_gallus
ENSACAG00000024956	-	76	46.970	ENSGACG00000006283	-	77	46.970	Gasterosteus_aculeatus
ENSACAG00000024956	-	82	41.686	ENSGAGG00000011366	-	95	43.309	Gopherus_agassizii
ENSACAG00000024956	-	94	90.335	ENSGAGG00000018885	-	89	90.335	Gopherus_agassizii
ENSACAG00000024956	-	77	50.216	ENSGAGG00000011399	-	86	48.500	Gopherus_agassizii
ENSACAG00000024956	-	78	39.773	ENSHCOG00000018201	-	88	39.773	Hippocampus_comes
ENSACAG00000024956	-	77	55.921	ENSIPUG00000015468	-	96	48.250	Ictalurus_punctatus
ENSACAG00000024956	-	77	50.136	ENSIPUG00000021515	-	85	50.136	Ictalurus_punctatus
ENSACAG00000024956	-	83	37.793	ENSIPUG00000012109	ZN12	54	37.793	Ictalurus_punctatus
ENSACAG00000024956	-	78	39.314	ENSJJAG00000023633	Zfp672	91	39.433	Jaculus_jaculus
ENSACAG00000024956	-	77	40.199	ENSLACG00000005264	-	97	40.199	Latimeria_chalumnae
ENSACAG00000024956	-	99	44.248	ENSLACG00000022211	-	99	44.248	Latimeria_chalumnae
ENSACAG00000024956	-	84	36.905	ENSLACG00000009005	-	100	37.555	Latimeria_chalumnae
ENSACAG00000024956	-	78	47.414	ENSLOCG00000014210	-	50	47.414	Lepisosteus_oculatus
ENSACAG00000024956	-	77	42.500	ENSLOCG00000017864	-	99	42.500	Lepisosteus_oculatus
ENSACAG00000024956	-	77	45.882	ENSMGAG00000013362	-	100	45.882	Meleagris_gallopavo
ENSACAG00000024956	-	79	39.904	ENSMAUG00000009945	Zfp672	91	42.795	Mesocricetus_auratus
ENSACAG00000024956	-	77	45.455	ENSMMOG00000003923	-	83	45.455	Mola_mola
ENSACAG00000024956	-	99	46.196	ENSMODG00000010532	-	99	46.196	Monodelphis_domestica
ENSACAG00000024956	-	99	46.954	ENSMODG00000001880	-	99	46.954	Monodelphis_domestica
ENSACAG00000024956	-	77	42.143	MGP_CAROLIEiJ_G0016391	Zfp672	85	53.488	Mus_caroli
ENSACAG00000024956	-	99	47.059	MGP_CAROLIEiJ_G0030502	-	92	47.059	Mus_caroli
ENSACAG00000024956	-	98	39.096	ENSMUSG00000030823	9130019O22Rik	90	43.111	Mus_musculus
ENSACAG00000024956	-	79	38.802	ENSMUSG00000049755	Zfp672	92	43.902	Mus_musculus
ENSACAG00000024956	-	79	38.802	MGP_SPRETEiJ_G0017233	Zfp672	92	42.683	Mus_spretus
ENSACAG00000024956	-	77	44.444	MGP_SPRETEiJ_G0031613	-	84	44.444	Mus_spretus
ENSACAG00000024956	-	99	42.727	ENSNGAG00000015777	Zim1	94	42.727	Nannospalax_galili
ENSACAG00000024956	-	77	41.509	ENSNBRG00000007276	-	52	41.509	Neolamprologus_brichardi
ENSACAG00000024956	-	77	40.314	ENSNBRG00000000708	-	87	40.314	Neolamprologus_brichardi
ENSACAG00000024956	-	77	45.000	ENSORLG00020001922	-	77	43.284	Oryzias_latipes_hni
ENSACAG00000024956	-	77	46.281	ENSOMEG00000001598	-	67	46.281	Oryzias_melastigma
ENSACAG00000024956	-	99	49.254	ENSPSIG00000005603	-	96	48.347	Pelodiscus_sinensis
ENSACAG00000024956	-	99	46.569	ENSPSIG00000010328	-	97	46.569	Pelodiscus_sinensis
ENSACAG00000024956	-	77	40.310	ENSPSIG00000006586	-	99	40.310	Pelodiscus_sinensis
ENSACAG00000024956	-	77	42.387	ENSPSIG00000000672	-	93	42.387	Pelodiscus_sinensis
ENSACAG00000024956	-	99	52.091	ENSPSIG00000004502	-	90	52.091	Pelodiscus_sinensis
ENSACAG00000024956	-	99	49.231	ENSPSIG00000015459	-	97	49.231	Pelodiscus_sinensis
ENSACAG00000024956	-	99	47.955	ENSPSIG00000005672	-	97	47.955	Pelodiscus_sinensis
ENSACAG00000024956	-	100	52.011	ENSPSIG00000010248	-	93	52.011	Pelodiscus_sinensis
ENSACAG00000024956	-	92	42.416	ENSPSIG00000003152	-	79	42.416	Pelodiscus_sinensis
ENSACAG00000024956	-	99	52.417	ENSPSIG00000013021	-	98	52.417	Pelodiscus_sinensis
ENSACAG00000024956	-	99	42.802	ENSPSIG00000016380	-	91	42.802	Pelodiscus_sinensis
ENSACAG00000024956	-	77	44.134	ENSPSIG00000012650	-	78	45.724	Pelodiscus_sinensis
ENSACAG00000024956	-	77	80.992	ENSPSIG00000006790	-	88	80.992	Pelodiscus_sinensis
ENSACAG00000024956	-	80	36.261	ENSPREG00000002642	-	97	35.586	Poecilia_reticulata
ENSACAG00000024956	-	75	47.170	ENSPNYG00000015486	-	52	47.170	Pundamilia_nyererei
ENSACAG00000024956	-	77	56.633	ENSPNAG00000000088	-	94	56.633	Pygocentrus_nattereri
ENSACAG00000024956	-	79	56.164	ENSPNAG00000018395	-	62	56.164	Pygocentrus_nattereri
ENSACAG00000024956	-	81	42.276	ENSRNOG00000002713	Zfp672	91	42.400	Rattus_norvegicus
ENSACAG00000024956	-	94	43.750	ENSSHAG00000018106	-	99	43.583	Sarcophilus_harrisii
ENSACAG00000024956	-	77	48.985	ENSSFOG00015019818	-	94	43.027	Scleropages_formosus
ENSACAG00000024956	-	77	40.323	ENSSMAG00000004252	-	88	41.615	Scophthalmus_maximus
ENSACAG00000024956	-	77	48.855	ENSSPUG00000010016	-	92	48.855	Sphenodon_punctatus
ENSACAG00000024956	-	81	51.852	ENSSPUG00000004366	-	64	51.852	Sphenodon_punctatus
ENSACAG00000024956	-	77	49.541	ENSSPAG00000021653	-	79	49.541	Stegastes_partitus
ENSACAG00000024956	-	77	50.396	ENSTGUG00000015210	-	100	50.396	Taeniopygia_guttata
ENSACAG00000024956	-	77	55.556	ENSTGUG00000018351	-	100	55.556	Taeniopygia_guttata
ENSACAG00000024956	-	80	42.564	ENSTRUG00000022066	-	95	42.564	Takifugu_rubripes
ENSACAG00000024956	-	84	41.538	ENSXETG00000031192	-	100	41.538	Xenopus_tropicalis
ENSACAG00000024956	-	77	51.923	ENSXCOG00000006553	-	85	51.923	Xiphophorus_couchianus
ENSACAG00000024956	-	81	46.400	ENSXMAG00000026680	-	88	46.400	Xiphophorus_maculatus