EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000026916 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 10315 bases
Position: chrGL343713.1:217331-227645
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000019475	zf-C2H2	PF00096.26	7.8e-53	1	8
ENSACAP00000019475	zf-C2H2	PF00096.26	7.8e-53	2	8
ENSACAP00000019475	zf-C2H2	PF00096.26	7.8e-53	3	8
ENSACAP00000019475	zf-C2H2	PF00096.26	7.8e-53	4	8
ENSACAP00000019475	zf-C2H2	PF00096.26	7.8e-53	5	8
ENSACAP00000019475	zf-C2H2	PF00096.26	7.8e-53	6	8
ENSACAP00000019475	zf-C2H2	PF00096.26	7.8e-53	7	8
ENSACAP00000019475	zf-C2H2	PF00096.26	7.8e-53	8	8
ENSACAP00000019475	zf-C2H2_jaz	PF12171.8	1.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000026567	-	2939	-	ENSACAP00000019475	595 (aa)	-	H9GSI9

Gene Model

Click here to download ENSACAG00000026916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000026916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000026916	-	81	55.000	ENSACAG00000025537	-	96	55.000
ENSACAG00000026916	-	81	41.451	ENSACAG00000022789	-	87	41.451
ENSACAG00000026916	-	81	53.928	ENSACAG00000000082	-	99	53.928
ENSACAG00000026916	-	80	34.973	ENSACAG00000011023	ZNF628	61	35.337
ENSACAG00000026916	-	81	41.254	ENSACAG00000024898	-	99	41.254
ENSACAG00000026916	-	82	54.988	ENSACAG00000026906	-	98	54.988
ENSACAG00000026916	-	82	54.565	ENSACAG00000022421	-	100	54.565
ENSACAG00000026916	-	81	37.082	ENSACAG00000003465	ZNF574	86	37.082
ENSACAG00000026916	-	81	40.482	ENSACAG00000026810	-	99	40.816
ENSACAG00000026916	-	80	48.308	ENSACAG00000029487	-	73	48.308
ENSACAG00000026916	-	99	50.877	ENSACAG00000008664	-	89	50.877
ENSACAG00000026916	-	99	45.685	ENSACAG00000024956	-	99	45.685
ENSACAG00000026916	-	81	48.000	ENSACAG00000025611	-	66	45.956
ENSACAG00000026916	-	99	50.535	ENSACAG00000022748	-	83	51.908
ENSACAG00000026916	-	81	56.160	ENSACAG00000027001	-	97	56.160
ENSACAG00000026916	-	82	53.079	ENSACAG00000013039	-	99	53.079
ENSACAG00000026916	-	88	48.642	ENSACAG00000013623	-	100	49.370
ENSACAG00000026916	-	80	40.546	ENSACAG00000015141	-	98	43.617

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000026916	-	85	49.701	ENSAMXG00000014745	-	94	49.701	Astyanax_mexicanus
ENSACAG00000026916	-	79	53.846	ENSAMXG00000038122	-	68	43.116	Astyanax_mexicanus
ENSACAG00000026916	-	79	39.247	ENSDARG00000096614	si:dkey-182i3.10	68	40.482	Danio_rerio
ENSACAG00000026916	-	81	48.159	ENSELUG00000000485	-	88	48.159	Esox_lucius
ENSACAG00000026916	-	81	42.779	ENSELUG00000013806	-	62	41.667	Esox_lucius
ENSACAG00000026916	-	81	47.423	ENSELUG00000018970	-	81	42.857	Esox_lucius
ENSACAG00000026916	-	79	45.752	ENSELUG00000011838	-	78	45.752	Esox_lucius
ENSACAG00000026916	-	79	43.243	ENSELUG00000021525	-	72	43.764	Esox_lucius
ENSACAG00000026916	-	79	41.425	ENSGACG00000001523	-	99	42.654	Gasterosteus_aculeatus
ENSACAG00000026916	-	84	42.905	ENSHBUG00000016384	-	91	42.905	Haplochromis_burtoni
ENSACAG00000026916	-	81	47.867	ENSHCOG00000017456	-	92	47.867	Hippocampus_comes
ENSACAG00000026916	-	81	45.736	ENSHCOG00000001629	-	64	45.736	Hippocampus_comes
ENSACAG00000026916	-	91	43.421	ENSLBEG00000013235	-	97	43.421	Labrus_bergylta
ENSACAG00000026916	-	81	33.761	ENSMGAG00000016603	-	100	44.444	Meleagris_gallopavo
ENSACAG00000026916	-	80	51.479	ENSPNAG00000009184	-	83	51.479	Pygocentrus_nattereri
ENSACAG00000026916	-	82	49.231	ENSPNAG00000009176	-	89	49.231	Pygocentrus_nattereri
ENSACAG00000026916	-	81	44.444	ENSSFOG00015020993	-	55	44.444	Scleropages_formosus
ENSACAG00000026916	-	80	40.789	ENSTNIG00000002343	-	85	40.789	Tetraodon_nigroviridis
ENSACAG00000026916	-	80	38.988	ENSTNIG00000000528	-	100	38.700	Tetraodon_nigroviridis
ENSACAG00000026916	-	86	44.215	ENSXMAG00000020042	-	76	44.215	Xiphophorus_maculatus