EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000028249 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 2897 bases
Position: chr4:14926337-14929233
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000022139	RVT_1	PF00078.27	1.2e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000029556	-	2897	-	ENSACAP00000022139	847 (aa)	-	R4GA54

Gene Model

Click here to download ENSACAG00000028249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000028249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000028249	-	92	30.703	ENSACAG00000029072	-	68	30.435
ENSACAG00000028249	-	83	100.000	ENSACAG00000028953	-	66	100.000
ENSACAG00000028249	-	100	39.908	ENSACAG00000029157	-	91	39.908
ENSACAG00000028249	-	99	31.494	ENSACAG00000028658	-	74	37.271
ENSACAG00000028249	-	82	38.682	ENSACAG00000028304	-	66	38.873
ENSACAG00000028249	-	100	99.764	ENSACAG00000028827	-	68	99.764
ENSACAG00000028249	-	99	37.923	ENSACAG00000029404	-	71	37.866
ENSACAG00000028249	-	81	30.028	ENSACAG00000006386	-	96	30.028
ENSACAG00000028249	-	85	31.283	ENSACAG00000028665	-	99	30.739
ENSACAG00000028249	-	54	36.000	ENSACAG00000002540	-	60	36.000
ENSACAG00000028249	-	98	37.711	ENSACAG00000028699	-	69	37.870
ENSACAG00000028249	-	89	99.734	ENSACAG00000028909	-	73	99.734
ENSACAG00000028249	-	96	37.377	ENSACAG00000028252	-	89	37.545
ENSACAG00000028249	-	100	39.677	ENSACAG00000028347	-	67	39.677
ENSACAG00000028249	-	86	30.223	ENSACAG00000029399	-	51	37.845
ENSACAG00000028249	-	99	30.769	ENSACAG00000028357	-	54	35.845
ENSACAG00000028249	-	61	35.985	ENSACAG00000029344	-	71	36.056
ENSACAG00000028249	-	100	99.882	ENSACAG00000029669	-	68	99.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000028249	-	62	31.685	ENSACLG00000014178	-	55	32.015	Astatotilapia_calliptera
ENSACAG00000028249	-	52	32.287	ENSAMXG00000032036	-	55	32.273	Astyanax_mexicanus
ENSACAG00000028249	-	62	33.829	ENSDARG00000103562	CU462878.2	58	34.369	Danio_rerio
ENSACAG00000028249	-	62	34.334	ENSKMAG00000006263	-	53	34.334	Kryptolebias_marmoratus
ENSACAG00000028249	-	52	32.511	ENSKMAG00000009272	-	52	32.715	Kryptolebias_marmoratus
ENSACAG00000028249	-	62	34.334	ENSKMAG00000003480	-	52	34.334	Kryptolebias_marmoratus
ENSACAG00000028249	-	50	31.787	ENSMZEG00005021767	-	52	31.190	Maylandia_zebra
ENSACAG00000028249	-	58	32.016	ENSMZEG00005017030	-	90	32.454	Maylandia_zebra
ENSACAG00000028249	-	58	32.016	ENSMZEG00005011529	-	89	32.454	Maylandia_zebra
ENSACAG00000028249	-	70	30.909	ENSORLG00000027405	-	57	33.208	Oryzias_latipes
ENSACAG00000028249	-	61	33.781	ENSORLG00000028313	-	60	33.781	Oryzias_latipes
ENSACAG00000028249	-	52	34.000	ENSORLG00000023604	-	50	34.928	Oryzias_latipes
ENSACAG00000028249	-	65	32.072	ENSORLG00000030415	-	57	34.468	Oryzias_latipes
ENSACAG00000028249	-	52	34.396	ENSORLG00000028706	-	85	34.396	Oryzias_latipes
ENSACAG00000028249	-	51	35.431	ENSORLG00020010425	-	73	35.431	Oryzias_latipes_hni
ENSACAG00000028249	-	57	32.136	ENSORLG00020014626	-	89	32.383	Oryzias_latipes_hni
ENSACAG00000028249	-	56	30.353	ENSORLG00020017925	-	69	33.005	Oryzias_latipes_hni
ENSACAG00000028249	-	81	32.781	ENSORLG00020002715	-	68	32.955	Oryzias_latipes_hni
ENSACAG00000028249	-	61	33.589	ENSORLG00020003980	-	62	33.589	Oryzias_latipes_hni
ENSACAG00000028249	-	61	33.973	ENSORLG00020013149	-	56	33.973	Oryzias_latipes_hni
ENSACAG00000028249	-	57	32.790	ENSORLG00015021206	-	93	32.790	Oryzias_latipes_hsok
ENSACAG00000028249	-	59	35.294	ENSOMEG00000002370	-	57	35.294	Oryzias_melastigma
ENSACAG00000028249	-	60	33.588	ENSPFOG00000024463	-	63	34.257	Poecilia_formosa
ENSACAG00000028249	-	59	30.452	ENSPREG00000006501	-	86	30.645	Poecilia_reticulata
ENSACAG00000028249	-	50	32.110	ENSSPAG00000000151	-	93	32.110	Stegastes_partitus
ENSACAG00000028249	-	90	31.220	ENSXETG00000032308	-	85	31.220	Xenopus_tropicalis
ENSACAG00000028249	-	99	43.452	ENSXETG00000034134	-	94	43.452	Xenopus_tropicalis
ENSACAG00000028249	-	97	42.941	ENSXETG00000030860	-	86	42.941	Xenopus_tropicalis
ENSACAG00000028249	-	81	32.653	ENSXETG00000032833	-	96	32.653	Xenopus_tropicalis