EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000028578 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA-editing enzyme 1a
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 14681 bases
Position: chr2:81083205-81097885
Accession: 100534649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000023351	APOBEC_N	PF08210.11	2.5e-24	1	1
ENSACAP00000023351	APOBEC_C	PF05240.14	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000030771	-	3815	XM_008103826	ENSACAP00000023351	179 (aa)	XP_008102033	R4GDA3

Gene Model

Click here to download ENSACAG00000028578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000028578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000028578	-	78	30.872	ENSACAG00000024915	-	80	30.872
ENSACAG00000028578	-	61	43.363	ENSACAG00000017441	AICDA	58	41.880

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000028578	-	93	40.936	ENSG00000111701	APOBEC1	72	40.936	Homo_sapiens
ENSACAG00000028578	-	98	40.331	ENSAMEG00000007098	APOBEC1	76	40.331	Ailuropoda_melanoleuca
ENSACAG00000028578	-	93	39.766	ENSANAG00000027743	APOBEC1	69	39.766	Aotus_nancymaae
ENSACAG00000028578	-	93	40.351	ENSBTAG00000014683	APOBEC1	72	40.351	Bos_taurus
ENSACAG00000028578	-	93	39.766	ENSCJAG00000005398	APOBEC1	77	39.766	Callithrix_jacchus
ENSACAG00000028578	-	98	42.162	ENSCAFG00000013901	APOBEC1	78	42.162	Canis_familiaris
ENSACAG00000028578	-	93	43.275	ENSCAFG00020003511	APOBEC1	71	43.275	Canis_lupus_dingo
ENSACAG00000028578	-	98	37.430	ENSCHIG00000011898	APOBEC1	76	37.430	Capra_hircus
ENSACAG00000028578	-	72	45.038	ENSTSYG00000029141	APOBEC1	92	45.038	Carlito_syrichta
ENSACAG00000028578	-	93	43.103	ENSCAPG00000015882	-	79	43.103	Cavia_aperea
ENSACAG00000028578	-	93	42.442	ENSCPOG00000033068	APOBEC1	72	42.442	Cavia_porcellus
ENSACAG00000028578	-	93	39.181	ENSCCAG00000022258	APOBEC1	72	39.181	Cebus_capucinus
ENSACAG00000028578	-	93	39.181	ENSCATG00000021613	APOBEC1	69	39.181	Cercocebus_atys
ENSACAG00000028578	-	93	41.954	ENSCLAG00000014645	APOBEC1	74	41.954	Chinchilla_lanigera
ENSACAG00000028578	-	69	41.270	ENSCSAG00000009817	APOBEC1	66	41.270	Chlorocebus_sabaeus
ENSACAG00000028578	-	98	45.856	ENSCPBG00000014335	-	73	45.856	Chrysemys_picta_bellii
ENSACAG00000028578	-	98	45.304	ENSCPBG00000014328	-	79	45.304	Chrysemys_picta_bellii
ENSACAG00000028578	-	99	45.604	ENSCPBG00000014327	-	70	46.409	Chrysemys_picta_bellii
ENSACAG00000028578	-	98	46.703	ENSCPBG00000014331	-	75	46.703	Chrysemys_picta_bellii
ENSACAG00000028578	-	93	44.318	ENSCPBG00000017398	-	76	44.318	Chrysemys_picta_bellii
ENSACAG00000028578	-	93	39.181	ENSCANG00000038359	APOBEC1	74	39.181	Colobus_angolensis_palliatus
ENSACAG00000028578	-	93	43.275	ENSCGRG00001011130	Apobec1	74	43.275	Cricetulus_griseus_chok1gshd
ENSACAG00000028578	-	93	43.275	ENSCGRG00000008644	Apobec1	74	43.275	Cricetulus_griseus_crigri
ENSACAG00000028578	-	93	40.936	ENSDNOG00000010926	APOBEC1	72	40.936	Dasypus_novemcinctus
ENSACAG00000028578	-	94	39.535	ENSDORG00000023717	Apobec1	81	39.535	Dipodomys_ordii
ENSACAG00000028578	-	93	39.535	ENSETEG00000004867	APOBEC1	72	39.535	Echinops_telfairi
ENSACAG00000028578	-	93	41.520	ENSEASG00005015951	APOBEC1	71	41.520	Equus_asinus_asinus
ENSACAG00000028578	-	69	43.651	ENSECAG00000017163	APOBEC1	66	43.651	Equus_caballus
ENSACAG00000028578	-	93	41.520	ENSEEUG00000009112	-	76	41.520	Erinaceus_europaeus
ENSACAG00000028578	-	72	44.697	ENSEEUG00000007530	-	62	44.697	Erinaceus_europaeus
ENSACAG00000028578	-	98	40.541	ENSFCAG00000009350	APOBEC1	78	40.541	Felis_catus
ENSACAG00000028578	-	94	50.350	ENSFALG00000007257	-	81	50.350	Ficedula_albicollis
ENSACAG00000028578	-	87	40.000	ENSFDAG00000018470	APOBEC1	76	40.000	Fukomys_damarensis
ENSACAG00000028578	-	99	43.094	ENSGAGG00000021744	-	71	43.094	Gopherus_agassizii
ENSACAG00000028578	-	99	43.784	ENSGAGG00000021745	-	68	43.784	Gopherus_agassizii
ENSACAG00000028578	-	88	44.785	ENSGAGG00000004947	-	81	44.785	Gopherus_agassizii
ENSACAG00000028578	-	98	43.407	ENSGAGG00000006624	-	65	43.407	Gopherus_agassizii
ENSACAG00000028578	-	92	54.622	ENSGAGG00000011837	-	86	54.622	Gopherus_agassizii
ENSACAG00000028578	-	93	42.197	ENSHGLG00000001495	APOBEC1	72	42.197	Heterocephalus_glaber_female
ENSACAG00000028578	-	93	42.197	ENSHGLG00100002187	APOBEC1	72	42.197	Heterocephalus_glaber_male
ENSACAG00000028578	-	69	42.857	ENSSTOG00000021971	APOBEC1	98	43.564	Ictidomys_tridecemlineatus
ENSACAG00000028578	-	84	42.208	ENSJJAG00000022108	Apobec1	67	42.208	Jaculus_jaculus
ENSACAG00000028578	-	93	40.936	ENSLAFG00000030837	APOBEC1	76	40.936	Loxodonta_africana
ENSACAG00000028578	-	93	39.181	ENSMFAG00000000277	APOBEC1	72	39.181	Macaca_fascicularis
ENSACAG00000028578	-	93	39.181	ENSMNEG00000029670	APOBEC1	72	39.181	Macaca_nemestrina
ENSACAG00000028578	-	93	39.181	ENSMLEG00000036301	APOBEC1	72	39.181	Mandrillus_leucophaeus
ENSACAG00000028578	-	84	44.805	ENSMAUG00000022167	Apobec1	69	44.805	Mesocricetus_auratus
ENSACAG00000028578	-	93	40.571	ENSMICG00000043645	APOBEC1	74	40.571	Microcebus_murinus
ENSACAG00000028578	-	53	48.515	ENSMOCG00000016170	-	85	48.515	Microtus_ochrogaster
ENSACAG00000028578	-	93	40.237	ENSMODG00000018004	APOBEC1	72	40.237	Monodelphis_domestica
ENSACAG00000028578	-	93	44.444	ENSMUSG00000040613	Apobec1	86	50.476	Mus_musculus
ENSACAG00000028578	-	93	43.529	MGP_PahariEiJ_G0022580	-	86	49.038	Mus_pahari
ENSACAG00000028578	-	93	44.444	MGP_SPRETEiJ_G0029857	Apobec1	86	50.476	Mus_spretus
ENSACAG00000028578	-	89	42.262	ENSMPUG00000017532	APOBEC1	71	42.262	Mustela_putorius_furo
ENSACAG00000028578	-	93	41.176	ENSNGAG00000022607	Apobec1	74	41.176	Nannospalax_galili
ENSACAG00000028578	-	93	39.766	ENSNLEG00000005342	APOBEC1	72	39.766	Nomascus_leucogenys
ENSACAG00000028578	-	93	41.520	ENSMEUG00000013406	APOBEC1	72	41.520	Notamacropus_eugenii
ENSACAG00000028578	-	93	37.647	ENSOPRG00000009508	-	94	37.647	Ochotona_princeps
ENSACAG00000028578	-	53	41.237	ENSODEG00000001157	-	98	41.237	Octodon_degus
ENSACAG00000028578	-	93	38.012	ENSOCUG00000025736	APOBEC1	64	38.012	Oryctolagus_cuniculus
ENSACAG00000028578	-	93	41.143	ENSOGAG00000026415	APOBEC1	72	41.143	Otolemur_garnettii
ENSACAG00000028578	-	93	40.698	ENSOARG00000002072	APOBEC1	71	40.698	Ovis_aries
ENSACAG00000028578	-	93	38.462	ENSPPAG00000027657	APOBEC1	70	38.462	Pan_paniscus
ENSACAG00000028578	-	98	40.541	ENSPPRG00000012182	APOBEC1	78	40.541	Panthera_pardus
ENSACAG00000028578	-	98	40.541	ENSPTIG00000020280	APOBEC1	78	40.541	Panthera_tigris_altaica
ENSACAG00000028578	-	93	40.351	ENSPTRG00000004614	APOBEC1	72	40.351	Pan_troglodytes
ENSACAG00000028578	-	93	39.181	ENSPANG00000021027	APOBEC1	72	39.181	Papio_anubis
ENSACAG00000028578	-	70	51.852	ENSPSIG00000012791	-	66	51.852	Pelodiscus_sinensis
ENSACAG00000028578	-	94	41.279	ENSPSIG00000012568	-	74	41.279	Pelodiscus_sinensis
ENSACAG00000028578	-	84	46.203	ENSPEMG00000023841	Apobec1	67	46.203	Peromyscus_maniculatus_bairdii
ENSACAG00000028578	-	93	39.181	ENSPCIG00000023973	APOBEC1	72	39.181	Phascolarctos_cinereus
ENSACAG00000028578	-	93	40.351	ENSPPYG00000004228	APOBEC1	69	40.351	Pongo_abelii
ENSACAG00000028578	-	93	39.181	ENSPCAG00000008733	APOBEC1	91	39.181	Procavia_capensis
ENSACAG00000028578	-	93	41.176	ENSPCOG00000013957	APOBEC1	75	41.176	Propithecus_coquereli
ENSACAG00000028578	-	69	42.063	ENSPVAG00000010709	APOBEC1	54	42.063	Pteropus_vampyrus
ENSACAG00000028578	-	84	44.304	ENSRNOG00000015411	Apobec1	67	44.304	Rattus_norvegicus
ENSACAG00000028578	-	93	40.351	ENSRBIG00000031161	APOBEC1	72	40.351	Rhinopithecus_bieti
ENSACAG00000028578	-	93	40.351	ENSRROG00000033576	APOBEC1	72	40.351	Rhinopithecus_roxellana
ENSACAG00000028578	-	93	40.351	ENSSBOG00000030587	APOBEC1	96	40.351	Saimiri_boliviensis_boliviensis
ENSACAG00000028578	-	90	41.818	ENSSHAG00000008925	APOBEC1	72	41.818	Sarcophilus_harrisii
ENSACAG00000028578	-	71	40.945	ENSSARG00000011972	-	97	40.945	Sorex_araneus
ENSACAG00000028578	-	93	36.686	ENSSARG00000000032	-	99	36.686	Sorex_araneus
ENSACAG00000028578	-	98	41.436	ENSSPUG00000009044	-	70	41.436	Sphenodon_punctatus
ENSACAG00000028578	-	98	41.398	ENSSSCG00000000668	APOBEC1	78	41.398	Sus_scrofa
ENSACAG00000028578	-	78	50.350	ENSTGUG00000013118	-	99	50.350	Taeniopygia_guttata
ENSACAG00000028578	-	93	37.870	ENSTBEG00000010043	APOBEC1	72	37.870	Tupaia_belangeri
ENSACAG00000028578	-	98	38.378	ENSTTRG00000014015	APOBEC1	98	38.378	Tursiops_truncatus
ENSACAG00000028578	-	93	41.520	ENSUAMG00000011636	APOBEC1	70	41.520	Ursus_americanus
ENSACAG00000028578	-	93	41.520	ENSUMAG00000016552	APOBEC1	70	41.520	Ursus_maritimus
ENSACAG00000028578	-	98	41.489	ENSVPAG00000001343	APOBEC1	78	41.489	Vicugna_pacos
ENSACAG00000028578	-	98	42.162	ENSVVUG00000010522	APOBEC1	78	42.162	Vulpes_vulpes