EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000029015 (Gene tree)
Gene ID: 100556404
Gene Symbol: -
Alias: -
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 27449 bases
Position: chrGL343272.1:253620-281068
Accession: 100556404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000022266	RRM_1	PF00076.22	1.1e-33	1	2
ENSACAP00000022266	RRM_1	PF00076.22	1.1e-33	2	2
ENSACAP00000022266	RRM_3	PF08777.11	2.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000029683	-	3713	XM_003224868	ENSACAP00000022266	261 (aa)	XP_003224916	R4GAG8

Gene Model

Click here to download ENSACAG00000029015's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs03040	Spliceosome	KEGG
acs05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000029015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000029015	-	63	41.420	ENSACAG00000005542	-	66	43.429
ENSACAG00000029015	-	63	39.645	ENSACAG00000002877	SRSF9	63	42.515
ENSACAG00000029015	-	68	72.376	ENSACAG00000005143	SRSF5	67	72.928
ENSACAG00000029015	-	67	64.045	ENSACAG00000002061	SRSF6	51	64.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000029015	-	68	75.000	ENSAPOG00000017395	srsf5a	62	78.378	Acanthochromis_polyacanthus
ENSACAG00000029015	-	85	68.398	ENSACIG00000011892	srsf5a	96	74.627	Amphilophus_citrinellus
ENSACAG00000029015	-	68	77.049	ENSAOCG00000014967	srsf5a	62	78.142	Amphiprion_ocellaris
ENSACAG00000029015	-	68	77.049	ENSAPEG00000009297	srsf5a	62	78.142	Amphiprion_percula
ENSACAG00000029015	-	68	77.660	ENSATEG00000000198	srsf5a	65	78.723	Anabas_testudineus
ENSACAG00000029015	-	68	85.000	ENSAPLG00000002469	-	70	84.444	Anas_platyrhynchos
ENSACAG00000029015	-	68	73.438	ENSACLG00000027166	srsf5a	65	74.869	Astatotilapia_calliptera
ENSACAG00000029015	-	68	76.757	ENSAMXG00000030476	srsf5a	67	77.297	Astyanax_mexicanus
ENSACAG00000029015	-	85	85.268	ENSCPBG00000021518	-	70	87.151	Chrysemys_picta_bellii
ENSACAG00000029015	-	68	54.592	ENSCSAVG00000011376	-	78	55.612	Ciona_savignyi
ENSACAG00000029015	-	68	73.196	ENSCSEG00000008109	srsf5a	62	75.130	Cynoglossus_semilaevis
ENSACAG00000029015	-	67	70.745	ENSCVAG00000016982	srsf5a	96	69.173	Cyprinodon_variegatus
ENSACAG00000029015	-	69	77.540	ENSDARG00000029818	srsf5a	95	78.740	Danio_rerio
ENSACAG00000029015	-	96	59.060	ENSELUG00000020439	srsf5a	62	77.720	Esox_lucius
ENSACAG00000029015	-	68	85.955	ENSFALG00000005098	-	64	85.393	Ficedula_albicollis
ENSACAG00000029015	-	68	71.910	ENSFHEG00000003955	srsf5a	97	66.207	Fundulus_heteroclitus
ENSACAG00000029015	-	68	76.966	ENSGMOG00000000869	srsf5a	94	77.528	Gadus_morhua
ENSACAG00000029015	-	68	84.831	ENSGALG00000033259	SRSF5A	63	84.270	Gallus_gallus
ENSACAG00000029015	-	68	70.787	ENSGAFG00000018237	srsf5a	54	70.787	Gambusia_affinis
ENSACAG00000029015	-	68	79.213	ENSGACG00000011761	srsf5a	70	79.213	Gasterosteus_aculeatus
ENSACAG00000029015	-	85	84.821	ENSGAGG00000007312	-	70	86.592	Gopherus_agassizii
ENSACAG00000029015	-	68	73.822	ENSHBUG00000014048	srsf5a	64	75.263	Haplochromis_burtoni
ENSACAG00000029015	-	68	75.401	ENSHCOG00000017557	srsf5a	62	76.344	Hippocampus_comes
ENSACAG00000029015	-	99	67.148	ENSIPUG00000003439	srsf5a	91	70.120	Ictalurus_punctatus
ENSACAG00000029015	-	68	71.809	ENSKMAG00000014937	srsf5a	58	68.528	Kryptolebias_marmoratus
ENSACAG00000029015	-	68	71.282	ENSLBEG00000017153	srsf5a	74	73.333	Labrus_bergylta
ENSACAG00000029015	-	68	82.873	ENSLACG00000017874	-	70	84.530	Latimeria_chalumnae
ENSACAG00000029015	-	68	77.297	ENSLOCG00000014075	srsf5a	88	68.045	Lepisosteus_oculatus
ENSACAG00000029015	-	68	78.453	ENSMAMG00000000192	srsf5a	65	79.558	Mastacembelus_armatus
ENSACAG00000029015	-	68	73.822	ENSMZEG00005010485	srsf5a	64	75.263	Maylandia_zebra
ENSACAG00000029015	-	73	82.723	ENSMGAG00000011888	-	96	83.125	Meleagris_gallopavo
ENSACAG00000029015	-	68	77.778	ENSMMOG00000009793	srsf5a	61	80.110	Mola_mola
ENSACAG00000029015	-	68	78.090	ENSMALG00000021194	srsf5a	63	76.966	Monopterus_albus
ENSACAG00000029015	-	68	74.211	ENSNBRG00000000771	srsf5a	64	75.661	Neolamprologus_brichardi
ENSACAG00000029015	-	68	74.211	ENSONIG00000019583	srsf5a	64	75.661	Oreochromis_niloticus
ENSACAG00000029015	-	69	73.057	ENSORLG00000009268	srsf5a	67	78.022	Oryzias_latipes
ENSACAG00000029015	-	69	73.057	ENSORLG00020003281	srsf5	67	78.022	Oryzias_latipes_hni
ENSACAG00000029015	-	69	73.057	ENSORLG00015023075	srsf5	67	78.022	Oryzias_latipes_hsok
ENSACAG00000029015	-	68	77.901	ENSOMEG00000000628	srsf5a	66	77.778	Oryzias_melastigma
ENSACAG00000029015	-	68	77.419	ENSPKIG00000002054	srsf5a	68	77.957	Paramormyrops_kingsleyae
ENSACAG00000029015	-	68	86.034	ENSPSIG00000008238	-	69	83.799	Pelodiscus_sinensis
ENSACAG00000029015	-	69	73.514	ENSPMGG00000020125	srsf5a	55	73.770	Periophthalmus_magnuspinnatus
ENSACAG00000029015	-	68	70.157	ENSPFOG00000022993	srsf5a	77	69.796	Poecilia_formosa
ENSACAG00000029015	-	68	70.000	ENSPLAG00000005508	srsf5a	76	69.672	Poecilia_latipinna
ENSACAG00000029015	-	68	70.157	ENSPMEG00000016339	srsf5a	60	72.251	Poecilia_mexicana
ENSACAG00000029015	-	68	69.792	ENSPREG00000018091	srsf5a	61	71.875	Poecilia_reticulata
ENSACAG00000029015	-	68	73.822	ENSPNYG00000021245	srsf5a	64	75.263	Pundamilia_nyererei
ENSACAG00000029015	-	68	76.630	ENSPNAG00000021333	srsf5a	66	77.174	Pygocentrus_nattereri
ENSACAG00000029015	-	68	77.419	ENSSFOG00015008377	srsf5	66	77.419	Scleropages_formosus
ENSACAG00000029015	-	68	72.637	ENSSMAG00000010899	srsf5a	66	72.500	Scophthalmus_maximus
ENSACAG00000029015	-	68	75.824	ENSSDUG00000006103	srsf5a	63	79.781	Seriola_dumerili
ENSACAG00000029015	-	68	75.824	ENSSLDG00000004146	srsf5a	63	79.781	Seriola_lalandi_dorsalis
ENSACAG00000029015	-	95	74.206	ENSSPUG00000002052	-	68	91.011	Sphenodon_punctatus
ENSACAG00000029015	-	68	77.596	ENSSPAG00000002821	srsf5a	63	78.689	Stegastes_partitus
ENSACAG00000029015	-	68	85.955	ENSTGUG00000011492	-	68	85.393	Taeniopygia_guttata
ENSACAG00000029015	-	68	72.396	ENSTRUG00000022908	srsf5a	65	75.000	Takifugu_rubripes
ENSACAG00000029015	-	100	72.826	ENSXETG00000017937	srsf5a	90	71.429	Xenopus_tropicalis
ENSACAG00000029015	-	68	73.262	ENSXCOG00000015338	srsf5a	61	74.866	Xiphophorus_couchianus
ENSACAG00000029015	-	68	69.430	ENSXMAG00000012823	srsf5a	61	71.503	Xiphophorus_maculatus