EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000029133 (Gene tree)
Gene ID: 100567101
Gene Symbol: -
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Plus strand
Length: 34340 bases
Position: chrGL343570.1:61361-95700
Accession: 100567101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000022470	tRNA-synt_1g	PF09334.11	2.4e-11	1	1
ENSACAP00000022470	Anticodon_1	PF08264.13	2.6e-35	1	1
ENSACAP00000022470	tRNA-synt_1	PF00133.22	1.8e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000029887	-	3507	XM_008121547	ENSACAP00000022470	1142 (aa)	XP_008119754	R4GB05

Gene Model

Click here to download ENSACAG00000029133's gene model file

Pathways

Pathway ID	Pathway Name	Source
acs00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000029133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000029133	-	79	55.154	ENSACAG00000022093	VARS2	78	57.427

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000029133	-	99	70.165	ENSG00000204394	VARS	99	74.233	Homo_sapiens
ENSACAG00000029133	-	99	71.516	ENSAPOG00000020921	vars	92	71.516	Acanthochromis_polyacanthus
ENSACAG00000029133	-	99	71.516	ENSAPOG00000020691	vars	92	71.516	Acanthochromis_polyacanthus
ENSACAG00000029133	-	99	70.277	ENSAMEG00000006417	VARS	90	70.451	Ailuropoda_melanoleuca
ENSACAG00000029133	-	99	70.808	ENSACIG00000013752	vars	90	70.808	Amphilophus_citrinellus
ENSACAG00000029133	-	99	71.875	ENSAOCG00000002447	vars	89	71.875	Amphiprion_ocellaris
ENSACAG00000029133	-	99	71.875	ENSAPEG00000010638	vars	89	71.875	Amphiprion_percula
ENSACAG00000029133	-	99	69.852	ENSATEG00000020219	vars	89	68.728	Anabas_testudineus
ENSACAG00000029133	-	99	70.303	ENSANAG00000015453	VARS	90	70.476	Aotus_nancymaae
ENSACAG00000029133	-	99	72.049	ENSACLG00000025699	vars	87	72.049	Astatotilapia_calliptera
ENSACAG00000029133	-	99	69.599	ENSAMXG00000017716	vars	90	68.348	Astyanax_mexicanus
ENSACAG00000029133	-	99	70.685	ENSBTAG00000005631	VARS	90	70.859	Bos_taurus
ENSACAG00000029133	-	99	69.991	ENSCJAG00000002604	VARS	90	70.165	Callithrix_jacchus
ENSACAG00000029133	-	99	70.598	ENSCAFG00000000636	VARS	90	70.772	Canis_familiaris
ENSACAG00000029133	-	99	70.598	ENSCAFG00020020790	VARS	92	70.859	Canis_lupus_dingo
ENSACAG00000029133	-	99	70.736	ENSCHIG00000011008	VARS	83	78.072	Capra_hircus
ENSACAG00000029133	-	99	69.991	ENSTSYG00000001567	VARS	90	70.165	Carlito_syrichta
ENSACAG00000029133	-	89	73.973	ENSCAPG00000013736	VARS	87	73.679	Cavia_aperea
ENSACAG00000029133	-	99	69.991	ENSCPOG00000000870	VARS	90	69.818	Cavia_porcellus
ENSACAG00000029133	-	99	70.859	ENSCCAG00000035656	VARS	90	70.425	Cebus_capucinus
ENSACAG00000029133	-	99	71.032	ENSCATG00000022394	VARS	90	70.598	Cercocebus_atys
ENSACAG00000029133	-	89	72.381	ENSCLAG00000009470	VARS	83	72.095	Chinchilla_lanigera
ENSACAG00000029133	-	99	70.945	ENSCSAG00000008784	VARS	90	70.512	Chlorocebus_sabaeus
ENSACAG00000029133	-	70	86.584	ENSCPBG00000007943	VARS	81	86.584	Chrysemys_picta_bellii
ENSACAG00000029133	-	99	71.119	ENSCANG00000033570	VARS	90	70.685	Colobus_angolensis_palliatus
ENSACAG00000029133	-	99	70.252	ENSCGRG00001005686	Vars	90	70.598	Cricetulus_griseus_chok1gshd
ENSACAG00000029133	-	92	68.052	ENSCGRG00000013352	Vars	69	67.745	Cricetulus_griseus_crigri
ENSACAG00000029133	-	99	69.204	ENSCSEG00000019652	vars	89	67.979	Cynoglossus_semilaevis
ENSACAG00000029133	-	99	72.049	ENSCVAG00000022398	vars	90	72.049	Cyprinodon_variegatus
ENSACAG00000029133	-	99	72.276	ENSDARG00000044575	vars	90	72.227	Danio_rerio
ENSACAG00000029133	-	79	78.878	ENSDORG00000016433	Vars	77	79.118	Dipodomys_ordii
ENSACAG00000029133	-	63	77.190	ENSETEG00000003824	VARS	62	77.190	Echinops_telfairi
ENSACAG00000029133	-	52	70.134	ENSEBUG00000004637	vars	82	70.134	Eptatretus_burgeri
ENSACAG00000029133	-	99	70.859	ENSEASG00005015673	VARS	90	70.312	Equus_asinus_asinus
ENSACAG00000029133	-	99	70.537	ENSECAG00000014620	VARS	90	71.144	Equus_caballus
ENSACAG00000029133	-	68	73.935	ENSEEUG00000004116	VARS	63	73.935	Erinaceus_europaeus
ENSACAG00000029133	-	99	69.905	ENSELUG00000006550	vars	88	70.216	Esox_lucius
ENSACAG00000029133	-	99	70.425	ENSFCAG00000004510	VARS	90	70.598	Felis_catus
ENSACAG00000029133	-	86	74.291	ENSFDAG00000011401	VARS	94	73.887	Fukomys_damarensis
ENSACAG00000029133	-	99	71.441	ENSFHEG00000010672	vars	90	71.441	Fundulus_heteroclitus
ENSACAG00000029133	-	99	69.037	ENSGMOG00000014908	vars	89	69.037	Gadus_morhua
ENSACAG00000029133	-	99	71.788	ENSGAFG00000021630	vars	90	71.788	Gambusia_affinis
ENSACAG00000029133	-	92	73.938	ENSGACG00000009601	vars	89	69.694	Gasterosteus_aculeatus
ENSACAG00000029133	-	56	71.094	ENSGAGG00000006508	-	91	70.781	Gopherus_agassizii
ENSACAG00000029133	-	99	71.032	ENSGGOG00000011364	VARS	90	70.598	Gorilla_gorilla
ENSACAG00000029133	-	99	71.948	ENSHBUG00000017151	vars	87	71.948	Haplochromis_burtoni
ENSACAG00000029133	-	99	70.191	ENSHGLG00000011646	VARS	90	70.191	Heterocephalus_glaber_female
ENSACAG00000029133	-	93	65.476	ENSHGLG00100018062	VARS	89	65.293	Heterocephalus_glaber_male
ENSACAG00000029133	-	99	71.069	ENSHCOG00000012198	vars	90	71.069	Hippocampus_comes
ENSACAG00000029133	-	99	71.565	ENSIPUG00000005218	vars	90	71.739	Ictalurus_punctatus
ENSACAG00000029133	-	99	70.945	ENSSTOG00000013112	VARS	90	69.705	Ictidomys_tridecemlineatus
ENSACAG00000029133	-	99	70.165	ENSJJAG00000019749	-	90	70.547	Jaculus_jaculus
ENSACAG00000029133	-	95	60.276	ENSJJAG00000015343	-	88	60.388	Jaculus_jaculus
ENSACAG00000029133	-	99	70.341	ENSKMAG00000009455	vars	90	69.258	Kryptolebias_marmoratus
ENSACAG00000029133	-	99	69.965	ENSLBEG00000010341	vars	90	69.459	Labrus_bergylta
ENSACAG00000029133	-	99	69.888	ENSLACG00000015232	VARS	94	69.543	Latimeria_chalumnae
ENSACAG00000029133	-	99	74.410	ENSLOCG00000004240	vars	90	74.148	Lepisosteus_oculatus
ENSACAG00000029133	-	99	70.920	ENSLAFG00000023090	VARS	90	70.920	Loxodonta_africana
ENSACAG00000029133	-	99	71.032	ENSMFAG00000001032	VARS	90	70.598	Macaca_fascicularis
ENSACAG00000029133	-	99	71.032	ENSMMUG00000006828	VARS	90	70.598	Macaca_mulatta
ENSACAG00000029133	-	99	70.945	ENSMNEG00000042072	VARS	90	70.512	Macaca_nemestrina
ENSACAG00000029133	-	99	71.032	ENSMLEG00000039307	VARS	90	70.598	Mandrillus_leucophaeus
ENSACAG00000029133	-	99	71.515	ENSMAMG00000003949	vars	90	71.799	Mastacembelus_armatus
ENSACAG00000029133	-	99	71.948	ENSMZEG00005018327	vars	87	71.948	Maylandia_zebra
ENSACAG00000029133	-	99	70.130	ENSMAUG00000006715	Vars	90	69.757	Mesocricetus_auratus
ENSACAG00000029133	-	99	70.685	ENSMICG00000003548	VARS	90	70.338	Microcebus_murinus
ENSACAG00000029133	-	99	69.297	ENSMOCG00000015404	Vars	90	69.965	Microtus_ochrogaster
ENSACAG00000029133	-	99	69.870	ENSMMOG00000015801	vars	89	69.610	Mola_mola
ENSACAG00000029133	-	99	70.338	ENSMODG00000015204	-	90	70.338	Monodelphis_domestica
ENSACAG00000029133	-	99	71.750	ENSMALG00000022532	vars	90	71.750	Monopterus_albus
ENSACAG00000029133	-	99	71.231	MGP_CAROLIEiJ_G0021491	Vars	90	71.231	Mus_caroli
ENSACAG00000029133	-	99	71.144	ENSMUSG00000007029	Vars	90	71.144	Mus_musculus
ENSACAG00000029133	-	99	71.144	MGP_PahariEiJ_G0020486	Vars	90	71.144	Mus_pahari
ENSACAG00000029133	-	99	71.231	MGP_SPRETEiJ_G0022396	Vars	90	71.231	Mus_spretus
ENSACAG00000029133	-	99	70.598	ENSMPUG00000010821	VARS	90	70.772	Mustela_putorius_furo
ENSACAG00000029133	-	87	71.769	ENSMLUG00000013126	VARS	100	71.769	Myotis_lucifugus
ENSACAG00000029133	-	99	70.191	ENSNGAG00000012151	Vars	90	70.451	Nannospalax_galili
ENSACAG00000029133	-	99	71.688	ENSNBRG00000020520	vars	90	71.688	Neolamprologus_brichardi
ENSACAG00000029133	-	99	69.991	ENSNLEG00000006351	VARS	90	70.165	Nomascus_leucogenys
ENSACAG00000029133	-	93	78.331	ENSMEUG00000011378	VARS	85	78.422	Notamacropus_eugenii
ENSACAG00000029133	-	99	70.598	ENSOPRG00000003607	VARS	90	70.139	Ochotona_princeps
ENSACAG00000029133	-	99	69.531	ENSODEG00000017681	VARS	90	69.792	Octodon_degus
ENSACAG00000029133	-	99	71.589	ENSONIG00000013064	vars	89	76.471	Oreochromis_niloticus
ENSACAG00000029133	-	86	70.671	ENSOANG00000005400	VARS	98	70.671	Ornithorhynchus_anatinus
ENSACAG00000029133	-	99	69.705	ENSOCUG00000022463	VARS	90	69.390	Oryctolagus_cuniculus
ENSACAG00000029133	-	99	71.096	ENSORLG00000013063	vars	90	71.170	Oryzias_latipes
ENSACAG00000029133	-	99	71.379	ENSORLG00020003504	vars	90	71.577	Oryzias_latipes_hni
ENSACAG00000029133	-	99	71.441	ENSORLG00015009001	vars	90	71.639	Oryzias_latipes_hsok
ENSACAG00000029133	-	99	71.528	ENSOMEG00000015016	vars	90	71.528	Oryzias_melastigma
ENSACAG00000029133	-	99	70.685	ENSOGAG00000007515	VARS	90	70.338	Otolemur_garnettii
ENSACAG00000029133	-	53	69.472	ENSOARG00000004625	-	86	70.132	Ovis_aries
ENSACAG00000029133	-	99	70.165	ENSPPAG00000034012	VARS	90	70.512	Pan_paniscus
ENSACAG00000029133	-	99	70.598	ENSPPRG00000014855	VARS	90	70.772	Panthera_pardus
ENSACAG00000029133	-	93	73.070	ENSPTIG00000010462	VARS	91	73.127	Panthera_tigris_altaica
ENSACAG00000029133	-	99	70.165	ENSPTRG00000017985	VARS	90	70.512	Pan_troglodytes
ENSACAG00000029133	-	99	68.992	ENSPANG00000014565	VARS	90	68.562	Papio_anubis
ENSACAG00000029133	-	99	71.924	ENSPKIG00000016304	vars	90	71.924	Paramormyrops_kingsleyae
ENSACAG00000029133	-	99	70.768	ENSPMGG00000023909	vars	90	68.745	Periophthalmus_magnuspinnatus
ENSACAG00000029133	-	99	70.512	ENSPEMG00000006639	Vars	90	70.052	Peromyscus_maniculatus_bairdii
ENSACAG00000029133	-	99	70.017	ENSPCIG00000018553	VARS	90	69.957	Phascolarctos_cinereus
ENSACAG00000029133	-	99	71.615	ENSPFOG00000015690	vars	90	71.615	Poecilia_formosa
ENSACAG00000029133	-	99	71.701	ENSPLAG00000009590	vars	90	71.701	Poecilia_latipinna
ENSACAG00000029133	-	99	71.577	ENSPMEG00000004708	vars	90	71.577	Poecilia_mexicana
ENSACAG00000029133	-	92	81.613	ENSPREG00000013264	vars	86	81.613	Poecilia_reticulata
ENSACAG00000029133	-	99	69.211	ENSPPYG00000016460	VARS	90	68.777	Pongo_abelii
ENSACAG00000029133	-	84	76.869	ENSPCAG00000013565	VARS	75	76.869	Procavia_capensis
ENSACAG00000029133	-	99	69.931	ENSPCOG00000010942	VARS	90	70.537	Propithecus_coquereli
ENSACAG00000029133	-	99	69.037	ENSPVAG00000012403	VARS	90	67.708	Pteropus_vampyrus
ENSACAG00000029133	-	99	71.948	ENSPNYG00000022511	vars	90	71.948	Pundamilia_nyererei
ENSACAG00000029133	-	99	70.895	ENSPNAG00000020962	vars	89	81.390	Pygocentrus_nattereri
ENSACAG00000029133	-	99	70.909	ENSRNOG00000000867	Vars	90	69.757	Rattus_norvegicus
ENSACAG00000029133	-	99	70.945	ENSRBIG00000041669	VARS	90	70.512	Rhinopithecus_bieti
ENSACAG00000029133	-	99	70.945	ENSRROG00000045490	VARS	90	70.512	Rhinopithecus_roxellana
ENSACAG00000029133	-	99	69.905	ENSSBOG00000035402	VARS	90	70.078	Saimiri_boliviensis_boliviensis
ENSACAG00000029133	-	99	68.054	ENSSHAG00000006937	VARS	90	65.659	Sarcophilus_harrisii
ENSACAG00000029133	-	99	71.788	ENSSFOG00015014272	vars	86	80.941	Scleropages_formosus
ENSACAG00000029133	-	99	70.380	ENSSMAG00000009596	vars	90	70.380	Scophthalmus_maximus
ENSACAG00000029133	-	99	71.280	ENSSDUG00000014177	vars	90	71.280	Seriola_dumerili
ENSACAG00000029133	-	99	71.194	ENSSLDG00000025316	vars	90	71.194	Seriola_lalandi_dorsalis
ENSACAG00000029133	-	99	71.615	ENSSPAG00000017068	vars	90	71.615	Stegastes_partitus
ENSACAG00000029133	-	99	70.104	ENSSSCG00000038950	VARS	90	70.711	Sus_scrofa
ENSACAG00000029133	-	91	67.950	ENSTRUG00000012307	vars	96	66.348	Takifugu_rubripes
ENSACAG00000029133	-	99	71.986	ENSTNIG00000008011	vars	87	75.189	Tetraodon_nigroviridis
ENSACAG00000029133	-	99	63.833	ENSTTRG00000014128	VARS	90	63.628	Tursiops_truncatus
ENSACAG00000029133	-	99	69.091	ENSUAMG00000010424	VARS	90	68.718	Ursus_americanus
ENSACAG00000029133	-	100	66.088	ENSUMAG00000013486	VARS	92	63.345	Ursus_maritimus
ENSACAG00000029133	-	99	71.057	ENSVVUG00000021323	VARS	90	71.144	Vulpes_vulpes
ENSACAG00000029133	-	99	68.312	ENSXETG00000024076	vars	90	67.619	Xenopus_tropicalis
ENSACAG00000029133	-	99	71.528	ENSXCOG00000019172	vars	89	71.615	Xiphophorus_couchianus
ENSACAG00000029133	-	99	71.875	ENSXMAG00000010927	vars	90	71.875	Xiphophorus_maculatus