EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACAG00000029278 (Gene tree)
Gene ID: 100553984
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 169511 bases
Position: chrGL343231.1:1857159-2026669
Accession: 100553984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000022162	PPR	PF01535.20	2.5e-29	1	4
ENSACAP00000022162	PPR	PF01535.20	2.5e-29	2	4
ENSACAP00000022162	PPR	PF01535.20	2.5e-29	3	4
ENSACAP00000022162	PPR	PF01535.20	2.5e-29	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000029579	LRPPRC-201	5362	XM_008115714	ENSACAP00000022162	1409 (aa)	XP_008113921	R4GA75

Gene Model

Click here to download ENSACAG00000029278's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000029278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000029278	LRPPRC	99	55.232	ENSAPOG00000016610	lrpprc	94	56.900	Acanthochromis_polyacanthus
ENSACAG00000029278	LRPPRC	96	61.352	ENSAMEG00000005852	LRPPRC	100	61.118	Ailuropoda_melanoleuca
ENSACAG00000029278	LRPPRC	100	52.424	ENSACIG00000009604	lrpprc	94	54.028	Amphilophus_citrinellus
ENSACAG00000029278	LRPPRC	99	54.552	ENSAOCG00000005886	lrpprc	94	56.186	Amphiprion_ocellaris
ENSACAG00000029278	LRPPRC	99	52.214	ENSAPEG00000002937	lrpprc	93	53.506	Amphiprion_percula
ENSACAG00000029278	LRPPRC	91	58.812	ENSATEG00000010555	lrpprc	93	63.229	Anabas_testudineus
ENSACAG00000029278	LRPPRC	99	60.426	ENSANAG00000027440	LRPPRC	99	60.638	Aotus_nancymaae
ENSACAG00000029278	LRPPRC	97	54.206	ENSACLG00000023712	lrpprc	99	54.279	Astatotilapia_calliptera
ENSACAG00000029278	LRPPRC	99	60.621	ENSCJAG00000000794	LRPPRC	100	60.452	Callithrix_jacchus
ENSACAG00000029278	LRPPRC	99	61.853	ENSCHIG00000020173	LRPPRC	97	63.138	Capra_hircus
ENSACAG00000029278	LRPPRC	96	48.763	ENSCAPG00000013631	LRPPRC	99	48.763	Cavia_aperea
ENSACAG00000029278	LRPPRC	86	61.956	ENSCPOG00000000204	LRPPRC	100	61.956	Cavia_porcellus
ENSACAG00000029278	LRPPRC	99	60.384	ENSCCAG00000031900	LRPPRC	96	61.652	Cebus_capucinus
ENSACAG00000029278	LRPPRC	99	61.021	ENSCATG00000014187	LRPPRC	99	59.774	Cercocebus_atys
ENSACAG00000029278	LRPPRC	99	60.000	ENSCLAG00000005203	LRPPRC	96	61.255	Chinchilla_lanigera
ENSACAG00000029278	LRPPRC	99	61.021	ENSCSAG00000013233	LRPPRC	99	61.080	Chlorocebus_sabaeus
ENSACAG00000029278	LRPPRC	84	60.384	ENSCHOG00000003631	LRPPRC	84	60.067	Choloepus_hoffmanni
ENSACAG00000029278	LRPPRC	99	58.021	ENSCANG00000034961	LRPPRC	99	57.655	Colobus_angolensis_palliatus
ENSACAG00000029278	LRPPRC	99	60.028	ENSCGRG00001016261	Lrpprc	96	61.328	Cricetulus_griseus_chok1gshd
ENSACAG00000029278	LRPPRC	99	60.028	ENSCGRG00000004072	Lrpprc	96	61.328	Cricetulus_griseus_crigri
ENSACAG00000029278	LRPPRC	99	43.303	ENSCSEG00000003850	lrpprc	84	54.824	Cynoglossus_semilaevis
ENSACAG00000029278	LRPPRC	99	55.165	ENSCVAG00000012967	lrpprc	94	56.541	Cyprinodon_variegatus
ENSACAG00000029278	LRPPRC	99	52.150	ENSDARG00000043970	lrpprc	93	53.705	Danio_rerio
ENSACAG00000029278	LRPPRC	99	60.510	ENSDNOG00000012594	-	96	62.000	Dasypus_novemcinctus
ENSACAG00000029278	LRPPRC	82	47.409	ENSDNOG00000032336	-	95	48.463	Dasypus_novemcinctus
ENSACAG00000029278	LRPPRC	99	60.953	ENSDORG00000012233	Lrpprc	96	62.214	Dipodomys_ordii
ENSACAG00000029278	LRPPRC	99	60.214	ENSETEG00000006657	LRPPRC	99	60.185	Echinops_telfairi
ENSACAG00000029278	LRPPRC	87	51.406	ENSEEUG00000012340	LRPPRC	90	51.406	Erinaceus_europaeus
ENSACAG00000029278	LRPPRC	96	53.002	ENSELUG00000012803	lrpprc	98	53.002	Esox_lucius
ENSACAG00000029278	LRPPRC	99	61.702	ENSFCAG00000013468	LRPPRC	99	61.511	Felis_catus
ENSACAG00000029278	LRPPRC	96	59.837	ENSFALG00000012738	LRPPRC	99	59.837	Ficedula_albicollis
ENSACAG00000029278	LRPPRC	99	59.391	ENSFDAG00000015328	LRPPRC	96	60.544	Fukomys_damarensis
ENSACAG00000029278	LRPPRC	99	54.024	ENSFHEG00000019604	lrpprc	94	55.662	Fundulus_heteroclitus
ENSACAG00000029278	LRPPRC	98	52.250	ENSGMOG00000008337	lrpprc	96	53.007	Gadus_morhua
ENSACAG00000029278	LRPPRC	99	54.749	ENSGAFG00000001455	lrpprc	95	56.352	Gambusia_affinis
ENSACAG00000029278	LRPPRC	99	54.487	ENSGACG00000010679	lrpprc	99	55.769	Gasterosteus_aculeatus
ENSACAG00000029278	LRPPRC	97	56.821	ENSHBUG00000000393	lrpprc	93	57.269	Haplochromis_burtoni
ENSACAG00000029278	LRPPRC	99	59.787	ENSHGLG00000006123	LRPPRC	96	60.956	Heterocephalus_glaber_female
ENSACAG00000029278	LRPPRC	60	60.833	ENSHGLG00100005960	-	100	60.833	Heterocephalus_glaber_male
ENSACAG00000029278	LRPPRC	96	54.668	ENSHCOG00000002107	lrpprc	95	55.019	Hippocampus_comes
ENSACAG00000029278	LRPPRC	98	57.491	ENSIPUG00000009406	lrpprc	94	58.017	Ictalurus_punctatus
ENSACAG00000029278	LRPPRC	99	61.226	ENSSTOG00000011185	LRPPRC	96	62.435	Ictidomys_tridecemlineatus
ENSACAG00000029278	LRPPRC	99	60.643	ENSJJAG00000020475	Lrpprc	97	61.726	Jaculus_jaculus
ENSACAG00000029278	LRPPRC	96	51.098	ENSKMAG00000003287	lrpprc	82	51.180	Kryptolebias_marmoratus
ENSACAG00000029278	LRPPRC	94	55.490	ENSLBEG00000023225	lrpprc	89	58.333	Labrus_bergylta
ENSACAG00000029278	LRPPRC	99	64.446	ENSLACG00000014030	LRPPRC	99	64.446	Latimeria_chalumnae
ENSACAG00000029278	LRPPRC	99	61.388	ENSLOCG00000016390	lrpprc	91	63.549	Lepisosteus_oculatus
ENSACAG00000029278	LRPPRC	99	57.436	ENSLAFG00000008614	LRPPRC	99	57.559	Loxodonta_africana
ENSACAG00000029278	LRPPRC	99	60.653	ENSMFAG00000041560	LRPPRC	99	59.618	Macaca_fascicularis
ENSACAG00000029278	LRPPRC	99	60.214	ENSMMUG00000019841	LRPPRC	99	62.367	Macaca_mulatta
ENSACAG00000029278	LRPPRC	99	61.162	ENSMNEG00000031613	LRPPRC	99	61.222	Macaca_nemestrina
ENSACAG00000029278	LRPPRC	98	50.467	ENSMAMG00000021835	lrpprc	94	51.855	Mastacembelus_armatus
ENSACAG00000029278	LRPPRC	100	55.656	ENSMZEG00005027379	lrpprc	94	57.342	Maylandia_zebra
ENSACAG00000029278	LRPPRC	99	59.957	ENSMAUG00000012118	Lrpprc	99	60.310	Mesocricetus_auratus
ENSACAG00000029278	LRPPRC	99	61.495	ENSMICG00000010486	LRPPRC	96	62.777	Microcebus_murinus
ENSACAG00000029278	LRPPRC	99	61.238	ENSMOCG00000006048	Lrpprc	96	62.574	Microtus_ochrogaster
ENSACAG00000029278	LRPPRC	95	57.451	ENSMMOG00000007830	lrpprc	94	61.211	Mola_mola
ENSACAG00000029278	LRPPRC	96	64.302	ENSMODG00000000648	LRPPRC	99	64.302	Monodelphis_domestica
ENSACAG00000029278	LRPPRC	99	53.938	ENSMALG00000001271	lrpprc	94	55.399	Monopterus_albus
ENSACAG00000029278	LRPPRC	98	63.583	ENSMPUG00000011800	LRPPRC	96	64.957	Mustela_putorius_furo
ENSACAG00000029278	LRPPRC	99	61.983	ENSMLUG00000010575	LRPPRC	96	63.092	Myotis_lucifugus
ENSACAG00000029278	LRPPRC	99	61.068	ENSNGAG00000013069	Lrpprc	96	62.352	Nannospalax_galili
ENSACAG00000029278	LRPPRC	95	53.523	ENSNBRG00000013202	lrpprc	99	53.523	Neolamprologus_brichardi
ENSACAG00000029278	LRPPRC	99	59.317	ENSNLEG00000016782	LRPPRC	96	60.619	Nomascus_leucogenys
ENSACAG00000029278	LRPPRC	92	56.192	ENSOPRG00000016774	LRPPRC	93	56.192	Ochotona_princeps
ENSACAG00000029278	LRPPRC	99	60.142	ENSODEG00000011211	LRPPRC	96	61.510	Octodon_degus
ENSACAG00000029278	LRPPRC	100	55.517	ENSONIG00000000917	lrpprc	95	57.524	Oreochromis_niloticus
ENSACAG00000029278	LRPPRC	74	58.161	ENSOANG00000014670	-	100	58.194	Ornithorhynchus_anatinus
ENSACAG00000029278	LRPPRC	99	61.867	ENSOCUG00000015046	LRPPRC	95	61.752	Oryctolagus_cuniculus
ENSACAG00000029278	LRPPRC	99	52.039	ENSORLG00000004605	lrpprc	98	51.225	Oryzias_latipes
ENSACAG00000029278	LRPPRC	91	55.271	ENSORLG00020012536	lrpprc	99	54.502	Oryzias_latipes_hni
ENSACAG00000029278	LRPPRC	99	51.408	ENSORLG00015018270	lrpprc	96	61.435	Oryzias_latipes_hsok
ENSACAG00000029278	LRPPRC	99	60.114	ENSOGAG00000012798	LRPPRC	96	61.402	Otolemur_garnettii
ENSACAG00000029278	LRPPRC	96	63.119	ENSOARG00000006522	LRPPRC	96	63.119	Ovis_aries
ENSACAG00000029278	LRPPRC	99	58.982	ENSPPAG00000040876	LRPPRC	100	58.919	Pan_paniscus
ENSACAG00000029278	LRPPRC	99	61.500	ENSPPRG00000006578	LRPPRC	96	62.758	Panthera_pardus
ENSACAG00000029278	LRPPRC	96	62.628	ENSPTIG00000000933	LRPPRC	96	62.823	Panthera_tigris_altaica
ENSACAG00000029278	LRPPRC	99	60.227	ENSPTRG00000011880	LRPPRC	96	61.283	Pan_troglodytes
ENSACAG00000029278	LRPPRC	99	60.894	ENSPANG00000020731	LRPPRC	99	59.774	Papio_anubis
ENSACAG00000029278	LRPPRC	90	57.623	ENSPKIG00000022232	lrpprc	97	57.623	Paramormyrops_kingsleyae
ENSACAG00000029278	LRPPRC	62	72.936	ENSPSIG00000006830	-	99	72.936	Pelodiscus_sinensis
ENSACAG00000029278	LRPPRC	67	49.789	ENSPMGG00000016597	lrpprc	97	49.789	Periophthalmus_magnuspinnatus
ENSACAG00000029278	LRPPRC	94	48.832	ENSPMAG00000002147	lrpprc	99	48.832	Petromyzon_marinus
ENSACAG00000029278	LRPPRC	99	54.126	ENSPFOG00000011227	lrpprc	97	55.728	Poecilia_formosa
ENSACAG00000029278	LRPPRC	99	53.916	ENSPLAG00000004018	lrpprc	95	55.547	Poecilia_latipinna
ENSACAG00000029278	LRPPRC	99	54.056	ENSPMEG00000016425	lrpprc	95	55.695	Poecilia_mexicana
ENSACAG00000029278	LRPPRC	99	54.437	ENSPREG00000003662	lrpprc	95	55.900	Poecilia_reticulata
ENSACAG00000029278	LRPPRC	57	60.149	ENSPPYG00000029532	-	100	60.149	Pongo_abelii
ENSACAG00000029278	LRPPRC	83	56.849	ENSPCAG00000001430	LRPPRC	81	59.738	Procavia_capensis
ENSACAG00000029278	LRPPRC	99	58.528	ENSPVAG00000002007	LRPPRC	96	59.808	Pteropus_vampyrus
ENSACAG00000029278	LRPPRC	98	52.616	ENSPNYG00000000756	lrpprc	97	53.235	Pundamilia_nyererei
ENSACAG00000029278	LRPPRC	99	57.932	ENSPNAG00000002895	lrpprc	95	59.501	Pygocentrus_nattereri
ENSACAG00000029278	LRPPRC	96	62.066	ENSRNOG00000005877	Lrpprc	96	62.066	Rattus_norvegicus
ENSACAG00000029278	LRPPRC	99	59.463	ENSRBIG00000031552	LRPPRC	99	59.717	Rhinopithecus_bieti
ENSACAG00000029278	LRPPRC	99	60.285	ENSSBOG00000011807	LRPPRC	99	60.214	Saimiri_boliviensis_boliviensis
ENSACAG00000029278	LRPPRC	96	61.333	ENSSHAG00000018725	LRPPRC	99	61.333	Sarcophilus_harrisii
ENSACAG00000029278	LRPPRC	100	53.905	ENSSFOG00015001042	lrpprc	95	55.225	Scleropages_formosus
ENSACAG00000029278	LRPPRC	99	55.642	ENSSDUG00000019062	lrpprc	94	56.995	Seriola_dumerili
ENSACAG00000029278	LRPPRC	99	47.660	ENSSLDG00000023028	lrpprc	96	48.892	Seriola_lalandi_dorsalis
ENSACAG00000029278	LRPPRC	87	58.626	ENSSARG00000000426	LRPPRC	99	58.626	Sorex_araneus
ENSACAG00000029278	LRPPRC	99	50.692	ENSSPAG00000000162	lrpprc	95	52.111	Stegastes_partitus
ENSACAG00000029278	LRPPRC	99	61.401	ENSSSCG00000008452	LRPPRC	96	62.667	Sus_scrofa
ENSACAG00000029278	LRPPRC	94	57.970	ENSTGUG00000003759	LRPPRC	100	57.970	Taeniopygia_guttata
ENSACAG00000029278	LRPPRC	99	54.310	ENSTRUG00000008409	lrpprc	90	56.522	Takifugu_rubripes
ENSACAG00000029278	LRPPRC	99	53.684	ENSTNIG00000007470	lrpprc	99	55.018	Tetraodon_nigroviridis
ENSACAG00000029278	LRPPRC	99	59.515	ENSTTRG00000006403	LRPPRC	99	59.658	Tursiops_truncatus
ENSACAG00000029278	LRPPRC	96	59.007	ENSVPAG00000008993	LRPPRC	99	59.007	Vicugna_pacos
ENSACAG00000029278	LRPPRC	97	66.862	ENSXETG00000009296	lrpprc	98	66.935	Xenopus_tropicalis
ENSACAG00000029278	LRPPRC	99	51.374	ENSXCOG00000013343	lrpprc	88	57.942	Xiphophorus_couchianus
ENSACAG00000029278	LRPPRC	99	54.818	ENSXMAG00000018108	lrpprc	95	56.305	Xiphophorus_maculatus