EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACAG00000029367 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anolis_carolinensis
Status: putative
Strand: Minus strand
Length: 2344 bases
Position: chr2:103314668-103317011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACAP00000022179	RVT_1	PF00078.27	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACAT00000029596	-	2344	-	ENSACAP00000022179	716 (aa)	-	R4GA90

Gene Model

Click here to download ENSACAG00000029367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACAG00000029367's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACAG00000029367	-	93	30.669	ENSACAG00000029010	-	66	30.669
ENSACAG00000029367	-	93	30.466	ENSACAG00000028913	-	76	30.466
ENSACAG00000029367	-	93	30.814	ENSACAG00000028872	-	67	30.814
ENSACAG00000029367	-	93	30.391	ENSACAG00000028870	-	72	35.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACAG00000029367	-	60	56.410	ENSAPOG00000012172	-	75	56.410	Acanthochromis_polyacanthus
ENSACAG00000029367	-	75	31.986	ENSAMXG00000030934	-	79	31.892	Astyanax_mexicanus
ENSACAG00000029367	-	84	33.441	ENSAMXG00000043875	-	84	33.762	Astyanax_mexicanus
ENSACAG00000029367	-	78	30.640	ENSAMXG00000038544	-	80	30.517	Astyanax_mexicanus
ENSACAG00000029367	-	86	35.358	ENSAMXG00000036897	-	81	34.891	Astyanax_mexicanus
ENSACAG00000029367	-	85	34.026	ENSAMXG00000033831	-	76	34.345	Astyanax_mexicanus
ENSACAG00000029367	-	83	33.871	ENSAMXG00000029689	-	60	45.238	Astyanax_mexicanus
ENSACAG00000029367	-	66	45.779	ENSIPUG00000023478	-	89	33.758	Ictalurus_punctatus
ENSACAG00000029367	-	67	42.900	ENSIPUG00000020583	-	85	33.227	Ictalurus_punctatus
ENSACAG00000029367	-	62	46.284	ENSIPUG00000009957	-	73	46.284	Ictalurus_punctatus
ENSACAG00000029367	-	67	39.564	ENSIPUG00000000467	-	80	31.520	Ictalurus_punctatus
ENSACAG00000029367	-	90	34.361	ENSKMAG00000021728	-	94	34.361	Kryptolebias_marmoratus
ENSACAG00000029367	-	62	40.136	ENSORLG00000027546	-	64	40.136	Oryzias_latipes
ENSACAG00000029367	-	78	30.783	ENSORLG00000025074	-	82	30.099	Oryzias_latipes
ENSACAG00000029367	-	66	40.000	ENSORLG00020018037	-	69	41.368	Oryzias_latipes_hni
ENSACAG00000029367	-	69	40.850	ENSORLG00020008270	-	66	40.850	Oryzias_latipes_hni
ENSACAG00000029367	-	64	41.883	ENSORLG00020019360	-	67	41.883	Oryzias_latipes_hni
ENSACAG00000029367	-	63	43.478	ENSPKIG00000021000	-	87	43.478	Paramormyrops_kingsleyae
ENSACAG00000029367	-	84	32.895	ENSPKIG00000000452	-	87	33.388	Paramormyrops_kingsleyae
ENSACAG00000029367	-	84	34.416	ENSPNAG00000014076	-	88	34.258	Pygocentrus_nattereri
ENSACAG00000029367	-	64	46.349	ENSPNAG00000003267	-	77	46.349	Pygocentrus_nattereri