EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000000010 (Gene tree)
Gene ID: -
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 18965 bases
Position: chrCCOE01000001.1:244689-263653
Accession: ZDB-GENE-030131-5923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000000014	RRM_1	PF00076.22	3.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000000014	-	741	-	ENSACIP00000000014	246 (aa)	-	-

Gene Model

Click here to download ENSACIG00000000010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000000010's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000000010	rbm38	53	73.333	ENSACIG00000010987	rbm24a	82	63.731
ENSACIG00000000010	rbm38	98	63.889	ENSACIG00000012502	-	100	82.906
ENSACIG00000000010	rbm38	61	62.893	ENSACIG00000015650	rbm24b	100	51.600

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000000010	rbm38	91	57.082	ENSG00000132819	RBM38	94	81.197	Homo_sapiens
ENSACIG00000000010	rbm38	100	94.400	ENSAPOG00000003301	rbm38	100	94.400	Acanthochromis_polyacanthus
ENSACIG00000000010	rbm38	98	64.286	ENSAPOG00000009939	-	100	65.217	Acanthochromis_polyacanthus
ENSACIG00000000010	rbm38	95	65.000	ENSAOCG00000012559	RBM38	98	65.417	Amphiprion_ocellaris
ENSACIG00000000010	rbm38	100	94.400	ENSAOCG00000013497	-	100	94.400	Amphiprion_ocellaris
ENSACIG00000000010	rbm38	100	94.400	ENSAPEG00000013137	rbm38	100	94.400	Amphiprion_percula
ENSACIG00000000010	rbm38	98	63.889	ENSAPEG00000023581	-	100	64.286	Amphiprion_percula
ENSACIG00000000010	rbm38	100	88.400	ENSATEG00000016366	rbm38	100	88.400	Anabas_testudineus
ENSACIG00000000010	rbm38	98	64.683	ENSATEG00000016710	-	100	64.706	Anabas_testudineus
ENSACIG00000000010	rbm38	93	55.882	ENSACAG00000016238	RBM38	90	55.882	Anolis_carolinensis
ENSACIG00000000010	rbm38	93	57.143	ENSANAG00000031959	RBM38	81	85.859	Aotus_nancymaae
ENSACIG00000000010	rbm38	98	64.143	ENSACLG00000019514	-	100	64.143	Astatotilapia_calliptera
ENSACIG00000000010	rbm38	95	55.882	ENSAMXG00000038120	rbm38	96	55.882	Astyanax_mexicanus
ENSACIG00000000010	rbm38	98	61.600	ENSAMXG00000015601	-	100	61.600	Astyanax_mexicanus
ENSACIG00000000010	rbm38	91	57.511	ENSBTAG00000008105	RBM38	89	57.511	Bos_taurus
ENSACIG00000000010	rbm38	57	60.284	WBGene00006321	sup-12	59	79.775	Caenorhabditis_elegans
ENSACIG00000000010	rbm38	91	56.652	ENSCJAG00000019139	RBM38	81	85.859	Callithrix_jacchus
ENSACIG00000000010	rbm38	91	57.511	ENSCAFG00020021943	RBM38	89	57.511	Canis_lupus_dingo
ENSACIG00000000010	rbm38	91	56.652	ENSCHIG00000002609	RBM38	89	56.652	Capra_hircus
ENSACIG00000000010	rbm38	91	57.511	ENSCPOG00000012781	RBM38	89	57.511	Cavia_porcellus
ENSACIG00000000010	rbm38	91	56.652	ENSCCAG00000036872	RBM38	81	85.859	Cebus_capucinus
ENSACIG00000000010	rbm38	91	57.940	ENSCATG00000032133	RBM38	81	85.859	Cercocebus_atys
ENSACIG00000000010	rbm38	93	56.723	ENSCLAG00000005906	RBM38	94	56.723	Chinchilla_lanigera
ENSACIG00000000010	rbm38	91	57.940	ENSCSAG00000015503	RBM38	89	57.940	Chlorocebus_sabaeus
ENSACIG00000000010	rbm38	93	58.403	ENSCPBG00000024059	RBM38	100	58.403	Chrysemys_picta_bellii
ENSACIG00000000010	rbm38	59	61.935	ENSCING00000025102	-	66	61.935	Ciona_intestinalis
ENSACIG00000000010	rbm38	60	59.615	ENSCSAVG00000001132	-	58	59.615	Ciona_savignyi
ENSACIG00000000010	rbm38	93	46.352	ENSCANG00000030105	-	80	46.352	Colobus_angolensis_palliatus
ENSACIG00000000010	rbm38	72	63.934	ENSCGRG00001012928	Rbm38	89	57.082	Cricetulus_griseus_chok1gshd
ENSACIG00000000010	rbm38	98	62.698	ENSCSEG00000004701	-	100	63.386	Cynoglossus_semilaevis
ENSACIG00000000010	rbm38	83	68.421	ENSCSEG00000020943	rbm38	68	68.421	Cynoglossus_semilaevis
ENSACIG00000000010	rbm38	98	63.095	ENSCVAG00000005472	-	100	64.286	Cyprinodon_variegatus
ENSACIG00000000010	rbm38	100	83.600	ENSCVAG00000015952	rbm38	100	83.600	Cyprinodon_variegatus
ENSACIG00000000010	rbm38	98	63.052	ENSDARG00000058818	rbm38	100	63.052	Danio_rerio
ENSACIG00000000010	rbm38	93	55.932	ENSDNOG00000032004	RBM38	100	55.932	Dasypus_novemcinctus
ENSACIG00000000010	rbm38	56	61.644	ENSEBUG00000015164	rbm38	88	61.644	Eptatretus_burgeri
ENSACIG00000000010	rbm38	91	57.082	ENSECAG00000007700	RBM38	89	57.082	Equus_caballus
ENSACIG00000000010	rbm38	91	56.223	ENSEEUG00000013489	RBM38	89	57.082	Erinaceus_europaeus
ENSACIG00000000010	rbm38	91	72.609	ENSELUG00000000585	-	100	72.609	Esox_lucius
ENSACIG00000000010	rbm38	98	63.922	ENSELUG00000005849	-	100	63.922	Esox_lucius
ENSACIG00000000010	rbm38	74	63.298	ENSFCAG00000042916	RBM38	81	84.848	Felis_catus
ENSACIG00000000010	rbm38	69	67.232	ENSFALG00000010805	RBM38	90	66.477	Ficedula_albicollis
ENSACIG00000000010	rbm38	100	85.259	ENSFHEG00000017748	rbm38	100	85.259	Fundulus_heteroclitus
ENSACIG00000000010	rbm38	98	62.500	ENSFHEG00000006160	-	100	62.500	Fundulus_heteroclitus
ENSACIG00000000010	rbm38	75	68.063	ENSGMOG00000016655	-	99	71.053	Gadus_morhua
ENSACIG00000000010	rbm38	93	56.303	ENSGALG00000026081	RBM38	100	56.303	Gallus_gallus
ENSACIG00000000010	rbm38	93	78.970	ENSGACG00000015224	rbm38	100	78.970	Gasterosteus_aculeatus
ENSACIG00000000010	rbm38	93	62.605	ENSGACG00000009873	-	100	62.605	Gasterosteus_aculeatus
ENSACIG00000000010	rbm38	93	59.244	ENSGAGG00000001187	RBM38	100	59.244	Gopherus_agassizii
ENSACIG00000000010	rbm38	98	64.143	ENSHBUG00000011778	-	100	64.143	Haplochromis_burtoni
ENSACIG00000000010	rbm38	100	95.600	ENSHBUG00000012058	rbm38	100	95.600	Haplochromis_burtoni
ENSACIG00000000010	rbm38	91	56.652	ENSHGLG00000015077	RBM38	89	56.652	Heterocephalus_glaber_female
ENSACIG00000000010	rbm38	100	64.257	ENSHCOG00000019040	rbm38	100	64.257	Hippocampus_comes
ENSACIG00000000010	rbm38	85	66.667	ENSHCOG00000005622	-	60	67.593	Hippocampus_comes
ENSACIG00000000010	rbm38	98	60.000	ENSIPUG00000019349	-	100	60.000	Ictalurus_punctatus
ENSACIG00000000010	rbm38	91	74.359	ENSKMAG00000012402	rbm38	99	74.359	Kryptolebias_marmoratus
ENSACIG00000000010	rbm38	100	89.200	ENSLBEG00000018878	rbm38	100	89.200	Labrus_bergylta
ENSACIG00000000010	rbm38	98	62.550	ENSLBEG00000016163	RBM38	100	63.035	Labrus_bergylta
ENSACIG00000000010	rbm38	98	64.516	ENSLOCG00000003456	rbm38	100	64.516	Lepisosteus_oculatus
ENSACIG00000000010	rbm38	91	57.940	ENSMFAG00000043808	RBM38	81	85.859	Macaca_fascicularis
ENSACIG00000000010	rbm38	91	57.940	ENSMMUG00000031391	RBM38	81	85.859	Macaca_mulatta
ENSACIG00000000010	rbm38	91	57.940	ENSMNEG00000034683	RBM38	81	85.859	Macaca_nemestrina
ENSACIG00000000010	rbm38	100	91.200	ENSMAMG00000024135	rbm38	100	91.200	Mastacembelus_armatus
ENSACIG00000000010	rbm38	98	66.135	ENSMAMG00000020499	RBM38	100	66.142	Mastacembelus_armatus
ENSACIG00000000010	rbm38	100	95.600	ENSMZEG00005026036	rbm38	100	95.600	Maylandia_zebra
ENSACIG00000000010	rbm38	98	64.143	ENSMZEG00005000849	-	100	64.143	Maylandia_zebra
ENSACIG00000000010	rbm38	72	64.481	ENSMAUG00000021211	Rbm38	89	57.940	Mesocricetus_auratus
ENSACIG00000000010	rbm38	93	56.723	ENSMICG00000038011	RBM38	100	56.723	Microcebus_murinus
ENSACIG00000000010	rbm38	72	64.481	ENSMOCG00000008715	Rbm38	89	57.940	Microtus_ochrogaster
ENSACIG00000000010	rbm38	98	63.492	ENSMMOG00000020051	-	100	63.922	Mola_mola
ENSACIG00000000010	rbm38	95	56.198	ENSMODG00000016458	RBM38	94	56.198	Monodelphis_domestica
ENSACIG00000000010	rbm38	100	73.600	ENSMALG00000022327	rbm38	100	74.400	Monopterus_albus
ENSACIG00000000010	rbm38	75	73.684	ENSMALG00000004680	RBM38	89	64.435	Monopterus_albus
ENSACIG00000000010	rbm38	91	56.652	MGP_CAROLIEiJ_G0024745	Rbm38	89	56.652	Mus_caroli
ENSACIG00000000010	rbm38	91	56.652	ENSMUSG00000027510	Rbm38	89	56.652	Mus_musculus
ENSACIG00000000010	rbm38	91	56.652	MGP_PahariEiJ_G0026186	Rbm38	89	56.652	Mus_pahari
ENSACIG00000000010	rbm38	91	56.652	MGP_SPRETEiJ_G0025665	Rbm38	89	56.652	Mus_spretus
ENSACIG00000000010	rbm38	74	63.830	ENSMPUG00000006518	RBM38	97	61.576	Mustela_putorius_furo
ENSACIG00000000010	rbm38	91	57.082	ENSMLUG00000011140	RBM38	98	57.082	Myotis_lucifugus
ENSACIG00000000010	rbm38	100	94.800	ENSNBRG00000022685	rbm38	100	94.800	Neolamprologus_brichardi
ENSACIG00000000010	rbm38	98	64.143	ENSNBRG00000022545	-	100	64.143	Neolamprologus_brichardi
ENSACIG00000000010	rbm38	91	57.940	ENSODEG00000007980	RBM38	89	57.940	Octodon_degus
ENSACIG00000000010	rbm38	98	64.000	ENSONIG00000020324	-	100	64.000	Oreochromis_niloticus
ENSACIG00000000010	rbm38	98	95.918	ENSONIG00000017073	rbm38	100	95.918	Oreochromis_niloticus
ENSACIG00000000010	rbm38	91	55.603	ENSOANG00000009259	RBM38	74	61.735	Ornithorhynchus_anatinus
ENSACIG00000000010	rbm38	100	82.072	ENSORLG00000012154	rbm38	100	82.072	Oryzias_latipes
ENSACIG00000000010	rbm38	98	60.630	ENSORLG00000027180	-	100	61.811	Oryzias_latipes
ENSACIG00000000010	rbm38	100	60.078	ENSORLG00020020751	-	100	61.811	Oryzias_latipes_hni
ENSACIG00000000010	rbm38	100	82.470	ENSORLG00020017871	rbm38	100	82.470	Oryzias_latipes_hni
ENSACIG00000000010	rbm38	100	82.470	ENSORLG00015012606	rbm38	100	82.470	Oryzias_latipes_hsok
ENSACIG00000000010	rbm38	98	60.870	ENSORLG00015017040	-	100	61.660	Oryzias_latipes_hsok
ENSACIG00000000010	rbm38	98	61.905	ENSOMEG00000023912	-	100	62.698	Oryzias_melastigma
ENSACIG00000000010	rbm38	100	81.673	ENSOMEG00000006805	rbm38	100	81.673	Oryzias_melastigma
ENSACIG00000000010	rbm38	91	57.511	ENSOGAG00000029136	RBM38	88	57.511	Otolemur_garnettii
ENSACIG00000000010	rbm38	74	63.298	ENSPPRG00000009507	RBM38	81	84.848	Panthera_pardus
ENSACIG00000000010	rbm38	75	63.542	ENSPTRG00000013661	RBM38	81	85.859	Pan_troglodytes
ENSACIG00000000010	rbm38	57	71.034	ENSPTRG00000045845	-	77	71.034	Pan_troglodytes
ENSACIG00000000010	rbm38	91	57.940	ENSPANG00000020919	-	81	85.859	Papio_anubis
ENSACIG00000000010	rbm38	95	46.862	ENSPANG00000033127	-	93	46.862	Papio_anubis
ENSACIG00000000010	rbm38	98	60.714	ENSPKIG00000025417	rbm38	100	62.891	Paramormyrops_kingsleyae
ENSACIG00000000010	rbm38	98	59.600	ENSPKIG00000018122	-	100	80.342	Paramormyrops_kingsleyae
ENSACIG00000000010	rbm38	93	57.806	ENSPSIG00000011649	RBM38	92	57.806	Pelodiscus_sinensis
ENSACIG00000000010	rbm38	98	60.236	ENSPMGG00000017094	-	100	60.630	Periophthalmus_magnuspinnatus
ENSACIG00000000010	rbm38	100	78.486	ENSPMGG00000011343	rbm38	100	80.876	Periophthalmus_magnuspinnatus
ENSACIG00000000010	rbm38	95	57.438	ENSPCIG00000013648	RBM38	94	57.438	Phascolarctos_cinereus
ENSACIG00000000010	rbm38	100	86.220	ENSPFOG00000011658	rbm38	100	86.220	Poecilia_formosa
ENSACIG00000000010	rbm38	98	62.109	ENSPLAG00000002500	-	100	63.347	Poecilia_latipinna
ENSACIG00000000010	rbm38	100	85.827	ENSPLAG00000005218	rbm38	100	85.827	Poecilia_latipinna
ENSACIG00000000010	rbm38	100	85.827	ENSPMEG00000015770	rbm38	100	85.827	Poecilia_mexicana
ENSACIG00000000010	rbm38	100	85.827	ENSPREG00000007398	rbm38	100	85.827	Poecilia_reticulata
ENSACIG00000000010	rbm38	91	57.511	ENSPCOG00000026201	RBM38	84	83.495	Propithecus_coquereli
ENSACIG00000000010	rbm38	98	64.143	ENSPNYG00000019727	-	100	83.761	Pundamilia_nyererei
ENSACIG00000000010	rbm38	100	95.200	ENSPNYG00000021373	rbm38	100	95.200	Pundamilia_nyererei
ENSACIG00000000010	rbm38	98	62.400	ENSPNAG00000015123	-	91	81.356	Pygocentrus_nattereri
ENSACIG00000000010	rbm38	95	60.251	ENSPNAG00000010596	rbm38	96	60.251	Pygocentrus_nattereri
ENSACIG00000000010	rbm38	91	57.940	ENSRNOG00000006420	Rbm38	89	57.940	Rattus_norvegicus
ENSACIG00000000010	rbm38	93	51.082	ENSRROG00000036388	-	89	51.082	Rhinopithecus_roxellana
ENSACIG00000000010	rbm38	91	56.652	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSACIG00000000010	rbm38	98	58.000	ENSSFOG00015004453	rbm38	100	62.400	Scleropages_formosus
ENSACIG00000000010	rbm38	100	93.200	ENSSDUG00000022611	rbm38	100	93.200	Seriola_dumerili
ENSACIG00000000010	rbm38	98	64.683	ENSSDUG00000021082	RBM38	100	65.098	Seriola_dumerili
ENSACIG00000000010	rbm38	100	93.200	ENSSLDG00000010845	rbm38	100	93.200	Seriola_lalandi_dorsalis
ENSACIG00000000010	rbm38	98	64.683	ENSSLDG00000011778	RBM38	100	65.098	Seriola_lalandi_dorsalis
ENSACIG00000000010	rbm38	100	94.400	ENSSPAG00000011113	rbm38	100	94.400	Stegastes_partitus
ENSACIG00000000010	rbm38	98	64.683	ENSSPAG00000020989	RBM38	100	64.683	Stegastes_partitus
ENSACIG00000000010	rbm38	91	57.511	ENSSSCG00000007504	RBM38	89	57.511	Sus_scrofa
ENSACIG00000000010	rbm38	98	61.024	ENSTRUG00000019869	-	100	61.905	Takifugu_rubripes
ENSACIG00000000010	rbm38	100	84.000	ENSTRUG00000024954	rbm38	100	84.800	Takifugu_rubripes
ENSACIG00000000010	rbm38	93	63.866	ENSTNIG00000007093	-	100	63.866	Tetraodon_nigroviridis
ENSACIG00000000010	rbm38	74	63.298	ENSUAMG00000019780	RBM38	89	57.082	Ursus_americanus
ENSACIG00000000010	rbm38	91	57.511	ENSVVUG00000017246	RBM38	89	57.511	Vulpes_vulpes
ENSACIG00000000010	rbm38	93	55.508	ENSXETG00000011268	rbm38	99	56.846	Xenopus_tropicalis
ENSACIG00000000010	rbm38	51	75.000	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus
ENSACIG00000000010	rbm38	100	87.200	ENSXMAG00000023662	rbm38	100	87.200	Xiphophorus_maculatus