EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000000113 (Gene tree)
Gene ID
-
Gene Symbol
rbms1a
Alias
fe16a10|rbms1|wu:fe16a10
Full Name
RNA binding motif%2C single stranded interacting protein 1a
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Plus strand
Length
12071 bases
Position
chrCCOE01000003.1:12345-24415
Accession
ZDB-GENE-030131-4967
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000000149RRM_1PF00076.221.5e-3012
ENSACIP00000000149RRM_1PF00076.221.5e-3022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000000154-1059-ENSACIP00000000149352 (aa)--
Gene Model
Click here to download ENSACIG00000000113's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000000113's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000000113rbms1a8858.075ENSACIG00000006987-9058.308
ENSACIG00000000113rbms1a5735.000ENSACIG00000015357celf5a5635.000
ENSACIG00000000113rbms1a5033.750ENSACIG00000007698celf3b5733.750
ENSACIG00000000113rbms1a8962.209ENSACIG00000021498RBMS18762.209
ENSACIG00000000113rbms1a8157.877ENSACIG00000021113RBMS37267.553
ENSACIG00000000113rbms1a5932.558ENSACIG00000024190elavl35533.333
ENSACIG00000000113rbms1a8162.457ENSACIG00000021779rbms2a7662.373
ENSACIG00000000113rbms1a5434.826ENSACIG00000010855ELAVL28233.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000000113rbms1a8960.000ENSG00000153250RBMS18484.112Homo_sapiens
ENSACIG00000000113rbms1a9959.542ENSAPOG00000024437-9959.439Acanthochromis_polyacanthus
ENSACIG00000000113rbms1a10089.722ENSAPOG00000013761rbms1a10089.444Acanthochromis_polyacanthus
ENSACIG00000000113rbms1a8959.195ENSAMEG00000012661RBMS19159.026Ailuropoda_melanoleuca
ENSACIG00000000113rbms1a10090.000ENSAOCG00000010066rbms1a10089.722Amphiprion_ocellaris
ENSACIG00000000113rbms1a9960.459ENSAOCG00000014482-9960.614Amphiprion_ocellaris
ENSACIG00000000113rbms1a9960.204ENSAPEG00000018371-9960.358Amphiprion_percula
ENSACIG00000000113rbms1a10090.278ENSAPEG00000023563rbms1a10090.000Amphiprion_percula
ENSACIG00000000113rbms1a10085.753ENSATEG00000015450rbms1a10085.479Anabas_testudineus
ENSACIG00000000113rbms1a9960.567ENSATEG00000018573RBMS19960.309Anabas_testudineus
ENSACIG00000000113rbms1a8165.657ENSAPLG00000007282RBMS17565.436Anas_platyrhynchos
ENSACIG00000000113rbms1a8661.562ENSACAG00000011984RBMS16264.000Anolis_carolinensis
ENSACIG00000000113rbms1a8157.729ENSANAG00000024424RBMS19857.729Aotus_nancymaae
ENSACIG00000000113rbms1a9960.256ENSACLG00000013048RBMS19960.000Astatotilapia_calliptera
ENSACIG00000000113rbms1a10090.808ENSACLG00000021512rbms1a10090.808Astatotilapia_calliptera
ENSACIG00000000113rbms1a9062.069ENSAMXG00000002146rbms1a8762.248Astyanax_mexicanus
ENSACIG00000000113rbms1a9960.000ENSAMXG00000009969RBMS19959.847Astyanax_mexicanus
ENSACIG00000000113rbms1a8959.654ENSBTAG00000005180RBMS19956.391Bos_taurus
ENSACIG00000000113rbms1a8959.710ENSCJAG00000014861-8859.538Callithrix_jacchus
ENSACIG00000000113rbms1a9656.085ENSCJAG00000012871-9257.681Callithrix_jacchus
ENSACIG00000000113rbms1a8955.233ENSCJAG00000022465-9455.072Callithrix_jacchus
ENSACIG00000000113rbms1a8959.654ENSCAFG00000009922RBMS19956.391Canis_familiaris
ENSACIG00000000113rbms1a8960.000ENSCAFG00020006120RBMS19954.369Canis_lupus_dingo
ENSACIG00000000113rbms1a8959.884ENSCHIG00000023380RBMS18759.593Capra_hircus
ENSACIG00000000113rbms1a8960.000ENSTSYG00000005584RBMS19359.710Carlito_syrichta
ENSACIG00000000113rbms1a8959.710ENSCPOG00000012310RBMS19256.787Cavia_porcellus
ENSACIG00000000113rbms1a8959.366ENSCCAG00000033841RBMS19059.195Cebus_capucinus
ENSACIG00000000113rbms1a8960.000ENSCATG00000043032RBMS19359.710Cercocebus_atys
ENSACIG00000000113rbms1a8959.710ENSCLAG00000003031RBMS19456.787Chinchilla_lanigera
ENSACIG00000000113rbms1a8959.654ENSCSAG00000015687RBMS18659.483Chlorocebus_sabaeus
ENSACIG00000000113rbms1a6282.500ENSCHOG00000001579RBMS15681.481Choloepus_hoffmanni
ENSACIG00000000113rbms1a9061.318ENSCPBG00000026455RBMS18761.318Chrysemys_picta_bellii
ENSACIG00000000113rbms1a8960.000ENSCANG00000042152RBMS19359.710Colobus_angolensis_palliatus
ENSACIG00000000113rbms1a8958.721ENSCGRG00001022833Rbms18658.551Cricetulus_griseus_chok1gshd
ENSACIG00000000113rbms1a8958.721ENSCGRG00000008824Rbms19255.956Cricetulus_griseus_crigri
ENSACIG00000000113rbms1a10086.667ENSCSEG00000000889rbms1a10086.389Cynoglossus_semilaevis
ENSACIG00000000113rbms1a9958.673ENSCSEG00000010652RBMS19858.163Cynoglossus_semilaevis
ENSACIG00000000113rbms1a10083.333ENSCVAG00000014698rbms1a10083.065Cyprinodon_variegatus
ENSACIG00000000113rbms1a9960.881ENSCVAG00000002027RBMS19960.622Cyprinodon_variegatus
ENSACIG00000000113rbms1a9062.717ENSDARG00000074023rbms1a8763.401Danio_rerio
ENSACIG00000000113rbms1a8957.576ENSDNOG00000040691RBMS19457.418Dasypus_novemcinctus
ENSACIG00000000113rbms1a8960.000ENSDORG00000007103Rbms19457.300Dipodomys_ordii
ENSACIG00000000113rbms1a7858.478ENSETEG00000012135RBMS17658.276Echinops_telfairi
ENSACIG00000000113rbms1a8959.654ENSEASG00005023132RBMS19956.391Equus_asinus_asinus
ENSACIG00000000113rbms1a8959.654ENSECAG00000019894RBMS19954.369Equus_caballus
ENSACIG00000000113rbms1a8951.895ENSELUG00000019328RBMS18551.895Esox_lucius
ENSACIG00000000113rbms1a10068.254ENSELUG00000018923rbms1a10067.460Esox_lucius
ENSACIG00000000113rbms1a8960.000ENSFCAG00000012524RBMS19359.710Felis_catus
ENSACIG00000000113rbms1a8165.993ENSFALG00000004440RBMS18065.772Ficedula_albicollis
ENSACIG00000000113rbms1a8960.000ENSFDAG00000015692RBMS19257.064Fukomys_damarensis
ENSACIG00000000113rbms1a10083.333ENSFHEG00000005662rbms1a9891.753Fundulus_heteroclitus
ENSACIG00000000113rbms1a9961.499ENSFHEG00000000720RBMS19961.240Fundulus_heteroclitus
ENSACIG00000000113rbms1a9071.633ENSGMOG00000000525rbms1a10071.633Gadus_morhua
ENSACIG00000000113rbms1a8165.993ENSGALG00000011132RBMS18065.772Gallus_gallus
ENSACIG00000000113rbms1a9960.513ENSGAFG00000007708RBMS19960.513Gambusia_affinis
ENSACIG00000000113rbms1a9786.000ENSGAFG00000011633rbms1a9983.944Gambusia_affinis
ENSACIG00000000113rbms1a9280.055ENSGACG00000015174rbms1a9480.618Gasterosteus_aculeatus
ENSACIG00000000113rbms1a9959.794ENSGACG00000005671RBMS19960.207Gasterosteus_aculeatus
ENSACIG00000000113rbms1a9061.605ENSGAGG00000007866RBMS18761.032Gopherus_agassizii
ENSACIG00000000113rbms1a8960.000ENSGGOG00000001264RBMS19359.710Gorilla_gorilla
ENSACIG00000000113rbms1a9058.523ENSGGOG00000043756-10055.446Gorilla_gorilla
ENSACIG00000000113rbms1a9164.265ENSHBUG00000004516RBMS19163.689Haplochromis_burtoni
ENSACIG00000000113rbms1a10090.808ENSHBUG00000004802rbms1a10090.808Haplochromis_burtoni
ENSACIG00000000113rbms1a8960.000ENSHGLG00000010387RBMS19257.182Heterocephalus_glaber_female
ENSACIG00000000113rbms1a8960.000ENSHGLG00100014105RBMS19257.182Heterocephalus_glaber_male
ENSACIG00000000113rbms1a10084.783ENSHCOG00000020097rbms1a10084.511Hippocampus_comes
ENSACIG00000000113rbms1a9958.718ENSHCOG00000016668RBMS19857.949Hippocampus_comes
ENSACIG00000000113rbms1a9960.411ENSIPUG00000014677RBMS19960.154Ictalurus_punctatus
ENSACIG00000000113rbms1a9061.561ENSIPUG00000010131RBMS18762.139Ictalurus_punctatus
ENSACIG00000000113rbms1a8960.290ENSSTOG00000012501RBMS19257.341Ictidomys_tridecemlineatus
ENSACIG00000000113rbms1a8960.000ENSJJAG00000016543Rbms19457.341Jaculus_jaculus
ENSACIG00000000113rbms1a9960.000ENSKMAG00000013911RBMS19960.000Kryptolebias_marmoratus
ENSACIG00000000113rbms1a10081.720ENSKMAG00000011839-10081.452Kryptolebias_marmoratus
ENSACIG00000000113rbms1a10085.215ENSLBEG00000025962rbms1a10084.946Labrus_bergylta
ENSACIG00000000113rbms1a9960.358ENSLBEG00000005787RBMS19959.847Labrus_bergylta
ENSACIG00000000113rbms1a9956.784ENSLACG00000004324RBMS19856.784Latimeria_chalumnae
ENSACIG00000000113rbms1a9959.949ENSLOCG00000008622rbms1a9960.102Lepisosteus_oculatus
ENSACIG00000000113rbms1a8959.593ENSLAFG00000017217RBMS19159.420Loxodonta_africana
ENSACIG00000000113rbms1a8960.000ENSMFAG00000000274RBMS19359.710Macaca_fascicularis
ENSACIG00000000113rbms1a8959.654ENSMMUG00000016825RBMS19954.369Macaca_mulatta
ENSACIG00000000113rbms1a8960.000ENSMNEG00000039425RBMS19359.710Macaca_nemestrina
ENSACIG00000000113rbms1a8959.710ENSMLEG00000031517RBMS19359.420Mandrillus_leucophaeus
ENSACIG00000000113rbms1a10083.424ENSMAMG00000005018rbms1a10083.152Mastacembelus_armatus
ENSACIG00000000113rbms1a9958.462ENSMAMG00000003159-9958.718Mastacembelus_armatus
ENSACIG00000000113rbms1a10090.808ENSMZEG00005005661rbms1a10090.808Maylandia_zebra
ENSACIG00000000113rbms1a8266.780ENSMZEG00005007313RBMS18466.113Maylandia_zebra
ENSACIG00000000113rbms1a8165.217ENSMGAG00000011054RBMS18463.768Meleagris_gallopavo
ENSACIG00000000113rbms1a8958.721ENSMAUG00000008550Rbms18658.551Mesocricetus_auratus
ENSACIG00000000113rbms1a8958.790ENSMICG00000008325RBMS19456.233Microcebus_murinus
ENSACIG00000000113rbms1a8959.130ENSMOCG00000022617Rbms19456.233Microtus_ochrogaster
ENSACIG00000000113rbms1a9959.335ENSMMOG00000003707RBMS19959.079Mola_mola
ENSACIG00000000113rbms1a10087.500ENSMMOG00000018249rbms1a10087.222Mola_mola
ENSACIG00000000113rbms1a8166.667ENSMODG00000005250RBMS17466.443Monodelphis_domestica
ENSACIG00000000113rbms1a10084.677ENSMALG00000014235rbms1a10084.409Monopterus_albus
ENSACIG00000000113rbms1a9163.930ENSMALG00000015715-9959.791Monopterus_albus
ENSACIG00000000113rbms1a8958.551MGP_CAROLIEiJ_G0023586Rbms19455.801Mus_caroli
ENSACIG00000000113rbms1a8958.551ENSMUSG00000026970Rbms19455.801Mus_musculus
ENSACIG00000000113rbms1a8958.841MGP_PahariEiJ_G0025037Rbms18658.671Mus_pahari
ENSACIG00000000113rbms1a6882.836MGP_SPRETEiJ_G0024508Rbms16982.222Mus_spretus
ENSACIG00000000113rbms1a8957.341ENSMPUG00000000539RBMS18657.064Mustela_putorius_furo
ENSACIG00000000113rbms1a8957.182ENSMLUG00000008762RBMS18757.025Myotis_lucifugus
ENSACIG00000000113rbms1a8959.302ENSNGAG00000013636Rbms18659.130Nannospalax_galili
ENSACIG00000000113rbms1a8962.426ENSNBRG00000015151RBMS19362.426Neolamprologus_brichardi
ENSACIG00000000113rbms1a10090.251ENSNBRG00000020217rbms1a10090.251Neolamprologus_brichardi
ENSACIG00000000113rbms1a8960.000ENSNLEG00000001667RBMS19359.710Nomascus_leucogenys
ENSACIG00000000113rbms1a7253.160ENSMEUG00000000746RBMS18453.160Notamacropus_eugenii
ENSACIG00000000113rbms1a8953.890ENSOPRG00000012431RBMS18653.736Ochotona_princeps
ENSACIG00000000113rbms1a8959.710ENSODEG00000013934RBMS19456.787Octodon_degus
ENSACIG00000000113rbms1a9961.282ENSONIG00000008934RBMS19960.769Oreochromis_niloticus
ENSACIG00000000113rbms1a10087.664ENSONIG00000003329rbms1a10087.664Oreochromis_niloticus
ENSACIG00000000113rbms1a8165.217ENSOANG00000006166RBMS17665.000Ornithorhynchus_anatinus
ENSACIG00000000113rbms1a6043.750ENSOANG00000004477-10043.750Ornithorhynchus_anatinus
ENSACIG00000000113rbms1a8960.290ENSOCUG00000017365RBMS18160.116Oryctolagus_cuniculus
ENSACIG00000000113rbms1a10083.611ENSORLG00000003917rbms1a10083.333Oryzias_latipes
ENSACIG00000000113rbms1a9065.487ENSORLG00000016818RBMS19760.363Oryzias_latipes
ENSACIG00000000113rbms1a10083.611ENSORLG00020018663rbms1a10083.333Oryzias_latipes_hni
ENSACIG00000000113rbms1a9065.487ENSORLG00020022335RBMS19760.363Oryzias_latipes_hni
ENSACIG00000000113rbms1a9066.077ENSORLG00015018208RBMS19760.881Oryzias_latipes_hsok
ENSACIG00000000113rbms1a10083.889ENSORLG00015016556rbms1a10083.611Oryzias_latipes_hsok
ENSACIG00000000113rbms1a9163.953ENSOMEG00000002394RBMS19759.173Oryzias_melastigma
ENSACIG00000000113rbms1a8958.739ENSOGAG00000002900RBMS19358.571Otolemur_garnettii
ENSACIG00000000113rbms1a8959.884ENSOARG00000006870RBMS19456.749Ovis_aries
ENSACIG00000000113rbms1a8959.654ENSPPAG00000040083RBMS19159.483Pan_paniscus
ENSACIG00000000113rbms1a8163.211ENSPPAG00000036520-7963.000Pan_paniscus
ENSACIG00000000113rbms1a8960.000ENSPPRG00000005040RBMS19359.710Panthera_pardus
ENSACIG00000000113rbms1a8960.000ENSPTIG00000021240RBMS19359.710Panthera_tigris_altaica
ENSACIG00000000113rbms1a8163.880ENSPTRG00000039358-9853.824Pan_troglodytes
ENSACIG00000000113rbms1a8959.654ENSPTRG00000052304RBMS19159.483Pan_troglodytes
ENSACIG00000000113rbms1a8959.884ENSPANG00000001383RBMS19159.483Papio_anubis
ENSACIG00000000113rbms1a9958.355ENSPKIG00000012818rbms1a9958.355Paramormyrops_kingsleyae
ENSACIG00000000113rbms1a9163.714ENSPKIG00000001498rbms1a8862.963Paramormyrops_kingsleyae
ENSACIG00000000113rbms1a8166.330ENSPSIG00000010240RBMS17466.107Pelodiscus_sinensis
ENSACIG00000000113rbms1a9061.424ENSPMGG00000006310RBMS19459.939Periophthalmus_magnuspinnatus
ENSACIG00000000113rbms1a10084.615ENSPMGG00000004341rbms1a10084.615Periophthalmus_magnuspinnatus
ENSACIG00000000113rbms1a8959.130ENSPEMG00000009449Rbms18858.621Peromyscus_maniculatus_bairdii
ENSACIG00000000113rbms1a9062.178ENSPCIG00000018405RBMS18762.178Phascolarctos_cinereus
ENSACIG00000000113rbms1a9960.614ENSPFOG00000017483RBMS19960.358Poecilia_formosa
ENSACIG00000000113rbms1a10084.409ENSPFOG00000016116rbms1a10084.140Poecilia_formosa
ENSACIG00000000113rbms1a9960.513ENSPLAG00000000920RBMS19960.513Poecilia_latipinna
ENSACIG00000000113rbms1a10084.409ENSPLAG00000013864rbms1a10084.140Poecilia_latipinna
ENSACIG00000000113rbms1a9960.614ENSPMEG00000015838RBMS19960.358Poecilia_mexicana
ENSACIG00000000113rbms1a10086.667ENSPMEG00000016185rbms1a10086.389Poecilia_mexicana
ENSACIG00000000113rbms1a9960.358ENSPREG00000008146RBMS19960.358Poecilia_reticulata
ENSACIG00000000113rbms1a10084.409ENSPREG00000020161rbms1a10084.140Poecilia_reticulata
ENSACIG00000000113rbms1a8957.300ENSPPYG00000012879-8657.143Pongo_abelii
ENSACIG00000000113rbms1a8165.552ENSPCAG00000009673RBMS17465.333Procavia_capensis
ENSACIG00000000113rbms1a8959.302ENSPCOG00000027294RBMS19359.130Propithecus_coquereli
ENSACIG00000000113rbms1a7680.982ENSPVAG00000010429RBMS18651.437Pteropus_vampyrus
ENSACIG00000000113rbms1a9960.769ENSPNYG00000002643RBMS19960.256Pundamilia_nyererei
ENSACIG00000000113rbms1a8166.221ENSPNAG00000010225rbms1a7666.333Pygocentrus_nattereri
ENSACIG00000000113rbms1a9960.513ENSPNAG00000023479RBMS19960.358Pygocentrus_nattereri
ENSACIG00000000113rbms1a8958.721ENSRNOG00000008482Rbms19055.956Rattus_norvegicus
ENSACIG00000000113rbms1a8959.366ENSRBIG00000044262RBMS19953.976Rhinopithecus_bieti
ENSACIG00000000113rbms1a8959.654ENSRROG00000043108RBMS19954.217Rhinopithecus_roxellana
ENSACIG00000000113rbms1a8959.366ENSSBOG00000034705RBMS19359.195Saimiri_boliviensis_boliviensis
ENSACIG00000000113rbms1a8166.667ENSSHAG00000012271RBMS18562.759Sarcophilus_harrisii
ENSACIG00000000113rbms1a8962.385ENSSFOG00015014493rbms1a9262.500Scleropages_formosus
ENSACIG00000000113rbms1a9958.673ENSSFOG00015022929rbms19958.568Scleropages_formosus
ENSACIG00000000113rbms1a9959.897ENSSMAG00000012152RBMS19560.154Scophthalmus_maximus
ENSACIG00000000113rbms1a9581.395ENSSMAG00000012722rbms1a9684.320Scophthalmus_maximus
ENSACIG00000000113rbms1a9959.079ENSSDUG00000018803RBMS19859.231Seriola_dumerili
ENSACIG00000000113rbms1a10089.444ENSSDUG00000020602rbms1a10089.167Seriola_dumerili
ENSACIG00000000113rbms1a9959.079ENSSLDG00000016556RBMS19859.231Seriola_lalandi_dorsalis
ENSACIG00000000113rbms1a10089.444ENSSLDG00000009495rbms1a10089.167Seriola_lalandi_dorsalis
ENSACIG00000000113rbms1a8165.552ENSSPUG00000017163RBMS18065.333Sphenodon_punctatus
ENSACIG00000000113rbms1a9960.204ENSSPAG00000000059RBMS19960.358Stegastes_partitus
ENSACIG00000000113rbms1a10092.918ENSSPAG00000005371rbms1a10092.635Stegastes_partitus
ENSACIG00000000113rbms1a8960.000ENSSSCG00000015888RBMS18659.710Sus_scrofa
ENSACIG00000000113rbms1a8165.993ENSTGUG00000006606RBMS17465.772Taeniopygia_guttata
ENSACIG00000000113rbms1a10083.196ENSTRUG00000017155rbms1a10083.747Takifugu_rubripes
ENSACIG00000000113rbms1a9956.853ENSTRUG00000005466-9957.107Takifugu_rubripes
ENSACIG00000000113rbms1a8186.972ENSTNIG00000009477rbms1a9186.972Tetraodon_nigroviridis
ENSACIG00000000113rbms1a9459.945ENSTNIG00000016496RBMS19660.694Tetraodon_nigroviridis
ENSACIG00000000113rbms1a8953.890ENSTBEG00000016156RBMS19153.736Tupaia_belangeri
ENSACIG00000000113rbms1a8959.654ENSTTRG00000011058RBMS19159.483Tursiops_truncatus
ENSACIG00000000113rbms1a8960.000ENSUAMG00000022331RBMS18659.710Ursus_americanus
ENSACIG00000000113rbms1a8960.000ENSUMAG00000008605RBMS18959.710Ursus_maritimus
ENSACIG00000000113rbms1a8165.552ENSVPAG00000002716RBMS17965.333Vicugna_pacos
ENSACIG00000000113rbms1a8959.884ENSVVUG00000018682RBMS19359.710Vulpes_vulpes
ENSACIG00000000113rbms1a8656.740ENSXETG00000016204rbms18157.426Xenopus_tropicalis
ENSACIG00000000113rbms1a10086.667ENSXCOG00000001659rbms1a10086.389Xiphophorus_couchianus
ENSACIG00000000113rbms1a8961.919ENSXCOG00000000211RBMS19361.919Xiphophorus_couchianus
ENSACIG00000000113rbms1a9960.358ENSXMAG00000011405RBMS19959.847Xiphophorus_maculatus
ENSACIG00000000113rbms1a10086.667ENSXMAG00000001802rbms1a10086.389Xiphophorus_maculatus

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