EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000000545 (Gene tree)
Gene ID: -
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: guanine nucleotide binding protein-like 3 (nucleolar)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4840 bases
Position: chrCCOE01001131.1:1118457-1123296
Accession: ZDB-GENE-030131-616
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000000778	GN3L_Grn1	PF08701.11	7e-24	1	1
ENSACIP00000000763	GN3L_Grn1	PF08701.11	5e-21	1	1
ENSACIP00000000751	GN3L_Grn1	PF08701.11	5.2e-21	1	1
ENSACIP00000000778	MMR_HSR1	PF01926.23	1.4e-14	1	1
ENSACIP00000000763	MMR_HSR1	PF01926.23	1.9e-14	1	1
ENSACIP00000000751	MMR_HSR1	PF01926.23	2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000000788	-	1599	-	ENSACIP00000000751	532 (aa)	-	-
ENSACIT00000000815	-	1458	-	ENSACIP00000000778	485 (aa)	-	-
ENSACIT00000000800	-	1560	-	ENSACIP00000000763	519 (aa)	-	-

Gene Model

Click here to download ENSACIG00000000545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000000545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000000545	gnl3	74	42.222	ENSACIG00000010900	gnl3l	73	42.222

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000000545	gnl3	99	44.504	ENSG00000163938	GNL3	99	55.797	Homo_sapiens
ENSACIG00000000545	gnl3	100	74.147	ENSAPOG00000004048	gnl3	100	74.147	Acanthochromis_polyacanthus
ENSACIG00000000545	gnl3	99	42.857	ENSAMEG00000008456	GNL3	99	42.857	Ailuropoda_melanoleuca
ENSACIG00000000545	gnl3	100	74.686	ENSAOCG00000012879	gnl3	100	74.686	Amphiprion_ocellaris
ENSACIG00000000545	gnl3	100	74.865	ENSAPEG00000006146	gnl3	100	74.865	Amphiprion_percula
ENSACIG00000000545	gnl3	100	72.352	ENSATEG00000024242	gnl3	100	72.809	Anabas_testudineus
ENSACIG00000000545	gnl3	82	49.666	ENSAPLG00000005171	GNL3	99	44.362	Anas_platyrhynchos
ENSACIG00000000545	gnl3	99	47.027	ENSACAG00000007357	GNL3	99	47.387	Anolis_carolinensis
ENSACIG00000000545	gnl3	99	44.404	ENSANAG00000033209	GNL3	99	45.063	Aotus_nancymaae
ENSACIG00000000545	gnl3	100	81.579	ENSACLG00000007381	gnl3	100	81.579	Astatotilapia_calliptera
ENSACIG00000000545	gnl3	99	52.128	ENSAMXG00000020880	gnl3	99	52.305	Astyanax_mexicanus
ENSACIG00000000545	gnl3	93	45.188	ENSBTAG00000014549	GNL3	99	44.681	Bos_taurus
ENSACIG00000000545	gnl3	99	45.027	ENSCJAG00000044256	-	99	45.307	Callithrix_jacchus
ENSACIG00000000545	gnl3	99	45.027	ENSCJAG00000006864	-	99	45.307	Callithrix_jacchus
ENSACIG00000000545	gnl3	94	44.306	ENSCAFG00000009004	GNL3	99	43.772	Canis_familiaris
ENSACIG00000000545	gnl3	94	44.513	ENSCAFG00020002613	GNL3	93	46.835	Canis_lupus_dingo
ENSACIG00000000545	gnl3	99	44.982	ENSCHIG00000022181	GNL3	99	45.520	Capra_hircus
ENSACIG00000000545	gnl3	99	43.268	ENSTSYG00000006851	GNL3	99	44.165	Carlito_syrichta
ENSACIG00000000545	gnl3	99	41.894	ENSCPOG00000000282	GNL3	99	42.962	Cavia_porcellus
ENSACIG00000000545	gnl3	99	44.723	ENSCCAG00000033281	GNL3	99	45.455	Cebus_capucinus
ENSACIG00000000545	gnl3	99	44.964	ENSCATG00000040886	GNL3	99	44.964	Cercocebus_atys
ENSACIG00000000545	gnl3	99	42.909	ENSCLAG00000010109	-	99	43.376	Chinchilla_lanigera
ENSACIG00000000545	gnl3	99	44.883	ENSCSAG00000013315	GNL3	99	44.883	Chlorocebus_sabaeus
ENSACIG00000000545	gnl3	99	41.593	ENSCHOG00000002726	GNL3	99	41.770	Choloepus_hoffmanni
ENSACIG00000000545	gnl3	77	47.153	ENSCPBG00000018330	-	96	47.477	Chrysemys_picta_bellii
ENSACIG00000000545	gnl3	98	44.301	ENSCANG00000039969	GNL3	99	44.301	Colobus_angolensis_palliatus
ENSACIG00000000545	gnl3	99	44.304	ENSCGRG00001020950	Gnl3	99	44.689	Cricetulus_griseus_chok1gshd
ENSACIG00000000545	gnl3	99	44.304	ENSCGRG00000015225	Gnl3	99	44.689	Cricetulus_griseus_crigri
ENSACIG00000000545	gnl3	99	63.849	ENSCSEG00000005009	gnl3	100	63.849	Cynoglossus_semilaevis
ENSACIG00000000545	gnl3	100	67.877	ENSCVAG00000010679	gnl3	100	68.058	Cyprinodon_variegatus
ENSACIG00000000545	gnl3	99	55.971	ENSDARG00000006219	gnl3	99	56.684	Danio_rerio
ENSACIG00000000545	gnl3	99	43.672	ENSDNOG00000001037	GNL3	99	44.207	Dasypus_novemcinctus
ENSACIG00000000545	gnl3	99	45.404	ENSDORG00000000674	Gnl3	99	45.588	Dipodomys_ordii
ENSACIG00000000545	gnl3	89	77.465	ENSETEG00000016534	-	88	77.465	Echinops_telfairi
ENSACIG00000000545	gnl3	99	45.887	ENSEASG00005014636	GNL3	99	45.887	Equus_asinus_asinus
ENSACIG00000000545	gnl3	99	44.902	ENSECAG00000014850	GNL3	99	44.902	Equus_caballus
ENSACIG00000000545	gnl3	99	42.780	ENSEEUG00000004427	GNL3	99	42.960	Erinaceus_europaeus
ENSACIG00000000545	gnl3	100	62.301	ENSELUG00000008767	gnl3	100	62.832	Esox_lucius
ENSACIG00000000545	gnl3	99	44.563	ENSFCAG00000015719	GNL3	99	45.276	Felis_catus
ENSACIG00000000545	gnl3	99	47.764	ENSFALG00000008957	GNL3	99	48.022	Ficedula_albicollis
ENSACIG00000000545	gnl3	99	42.463	ENSFDAG00000020679	GNL3	99	43.566	Fukomys_damarensis
ENSACIG00000000545	gnl3	100	67.877	ENSFHEG00000020897	gnl3	100	68.784	Fundulus_heteroclitus
ENSACIG00000000545	gnl3	99	57.398	ENSGMOG00000001745	gnl3	100	57.932	Gadus_morhua
ENSACIG00000000545	gnl3	99	45.819	ENSGALG00000001613	GNL3	99	45.993	Gallus_gallus
ENSACIG00000000545	gnl3	99	61.509	ENSGAFG00000007184	gnl3	99	61.509	Gambusia_affinis
ENSACIG00000000545	gnl3	99	66.547	ENSGACG00000000309	gnl3	99	67.679	Gasterosteus_aculeatus
ENSACIG00000000545	gnl3	80	47.884	ENSGAGG00000021579	-	99	48.330	Gopherus_agassizii
ENSACIG00000000545	gnl3	99	44.107	ENSGGOG00000011444	GNL3	99	44.107	Gorilla_gorilla
ENSACIG00000000545	gnl3	100	80.541	ENSHBUG00000001340	gnl3	100	81.622	Haplochromis_burtoni
ENSACIG00000000545	gnl3	99	41.877	ENSHGLG00000018299	GNL3	99	42.703	Heterocephalus_glaber_female
ENSACIG00000000545	gnl3	99	60.323	ENSHCOG00000009446	gnl3	99	61.343	Hippocampus_comes
ENSACIG00000000545	gnl3	99	50.369	ENSIPUG00000023677	gnl3	99	52.632	Ictalurus_punctatus
ENSACIG00000000545	gnl3	98	43.340	ENSSTOG00000000356	GNL3	99	43.369	Ictidomys_tridecemlineatus
ENSACIG00000000545	gnl3	99	44.646	ENSJJAG00000021993	Gnl3	100	45.191	Jaculus_jaculus
ENSACIG00000000545	gnl3	100	69.273	ENSKMAG00000005965	gnl3	100	69.273	Kryptolebias_marmoratus
ENSACIG00000000545	gnl3	100	70.236	ENSLBEG00000011394	gnl3	100	70.236	Labrus_bergylta
ENSACIG00000000545	gnl3	99	48.063	ENSLACG00000001259	GNL3	99	48.587	Latimeria_chalumnae
ENSACIG00000000545	gnl3	99	52.135	ENSLOCG00000010542	gnl3	99	53.765	Lepisosteus_oculatus
ENSACIG00000000545	gnl3	99	42.500	ENSLAFG00000016056	GNL3	99	42.755	Loxodonta_africana
ENSACIG00000000545	gnl3	99	45.324	ENSMFAG00000000613	GNL3	99	45.324	Macaca_fascicularis
ENSACIG00000000545	gnl3	98	43.934	ENSMMUG00000012511	GNL3	99	43.934	Macaca_mulatta
ENSACIG00000000545	gnl3	98	44.118	ENSMNEG00000041979	GNL3	99	44.118	Macaca_nemestrina
ENSACIG00000000545	gnl3	99	45.324	ENSMLEG00000027696	GNL3	99	45.324	Mandrillus_leucophaeus
ENSACIG00000000545	gnl3	100	74.234	ENSMAMG00000008904	gnl3	100	74.414	Mastacembelus_armatus
ENSACIG00000000545	gnl3	100	80.360	ENSMZEG00005014857	gnl3	100	81.441	Maylandia_zebra
ENSACIG00000000545	gnl3	100	76.877	ENSMZEG00005014957	-	99	77.273	Maylandia_zebra
ENSACIG00000000545	gnl3	86	42.316	ENSMGAG00000000848	GNL3	80	43.671	Meleagris_gallopavo
ENSACIG00000000545	gnl3	99	44.587	ENSMAUG00000020178	Gnl3	99	44.526	Mesocricetus_auratus
ENSACIG00000000545	gnl3	99	42.857	ENSMICG00000016373	GNL3	99	42.857	Microcebus_murinus
ENSACIG00000000545	gnl3	99	42.077	ENSMOCG00000018437	Gnl3	99	42.259	Microtus_ochrogaster
ENSACIG00000000545	gnl3	99	69.373	ENSMMOG00000002815	gnl3	99	69.742	Mola_mola
ENSACIG00000000545	gnl3	94	46.516	ENSMODG00000011257	GNL3	99	46.847	Monodelphis_domestica
ENSACIG00000000545	gnl3	99	65.326	ENSMALG00000021043	gnl3	94	76.609	Monopterus_albus
ENSACIG00000000545	gnl3	99	43.494	MGP_CAROLIEiJ_G0019063	Gnl3	99	43.705	Mus_caroli
ENSACIG00000000545	gnl3	99	42.959	ENSMUSG00000042354	Gnl3	100	53.741	Mus_musculus
ENSACIG00000000545	gnl3	99	43.920	MGP_PahariEiJ_G0030080	Gnl3	99	43.920	Mus_pahari
ENSACIG00000000545	gnl3	99	43.594	MGP_SPRETEiJ_G0019948	Gnl3	99	43.705	Mus_spretus
ENSACIG00000000545	gnl3	99	43.190	ENSMPUG00000016777	GNL3	99	43.728	Mustela_putorius_furo
ENSACIG00000000545	gnl3	99	43.942	ENSMLUG00000000728	GNL3	99	44.424	Myotis_lucifugus
ENSACIG00000000545	gnl3	99	42.230	ENSNGAG00000017202	Gnl3	99	42.727	Nannospalax_galili
ENSACIG00000000545	gnl3	99	74.433	ENSNBRG00000013161	gnl3	99	78.831	Neolamprologus_brichardi
ENSACIG00000000545	gnl3	99	45.520	ENSNLEG00000007173	GNL3	99	45.520	Nomascus_leucogenys
ENSACIG00000000545	gnl3	99	36.692	ENSMEUG00000011502	-	99	37.262	Notamacropus_eugenii
ENSACIG00000000545	gnl3	68	45.730	ENSOPRG00000009356	GNL3	81	45.730	Ochotona_princeps
ENSACIG00000000545	gnl3	99	42.857	ENSODEG00000009492	GNL3	99	43.393	Octodon_degus
ENSACIG00000000545	gnl3	100	81.295	ENSONIG00000019335	gnl3	100	81.295	Oreochromis_niloticus
ENSACIG00000000545	gnl3	99	46.403	ENSOANG00000013437	GNL3	99	45.961	Ornithorhynchus_anatinus
ENSACIG00000000545	gnl3	99	43.784	ENSOCUG00000009841	GNL3	99	44.007	Oryctolagus_cuniculus
ENSACIG00000000545	gnl3	100	68.556	ENSORLG00000016030	gnl3	100	68.556	Oryzias_latipes
ENSACIG00000000545	gnl3	100	68.373	ENSORLG00020014358	gnl3	100	68.373	Oryzias_latipes_hni
ENSACIG00000000545	gnl3	100	68.556	ENSORLG00015009489	gnl3	100	68.556	Oryzias_latipes_hsok
ENSACIG00000000545	gnl3	100	68.519	ENSOMEG00000005462	gnl3	100	68.704	Oryzias_melastigma
ENSACIG00000000545	gnl3	99	43.816	ENSOGAG00000004101	GNL3	99	43.993	Otolemur_garnettii
ENSACIG00000000545	gnl3	99	44.718	ENSOARG00000002470	GNL3	99	45.230	Ovis_aries
ENSACIG00000000545	gnl3	99	44.464	ENSPPAG00000019253	GNL3	99	44.464	Pan_paniscus
ENSACIG00000000545	gnl3	99	44.544	ENSPPRG00000009550	GNL3	99	45.259	Panthera_pardus
ENSACIG00000000545	gnl3	99	44.365	ENSPTIG00000009356	GNL3	99	45.081	Panthera_tigris_altaica
ENSACIG00000000545	gnl3	99	44.464	ENSPTRG00000015009	GNL3	99	44.464	Pan_troglodytes
ENSACIG00000000545	gnl3	99	44.065	ENSPANG00000016579	GNL3	99	44.065	Papio_anubis
ENSACIG00000000545	gnl3	100	58.348	ENSPKIG00000024295	gnl3	100	59.246	Paramormyrops_kingsleyae
ENSACIG00000000545	gnl3	98	49.458	ENSPSIG00000011486	GNL3	99	49.639	Pelodiscus_sinensis
ENSACIG00000000545	gnl3	99	61.397	ENSPMGG00000008210	gnl3	99	61.397	Periophthalmus_magnuspinnatus
ENSACIG00000000545	gnl3	99	43.268	ENSPEMG00000017577	Gnl3	99	43.525	Peromyscus_maniculatus_bairdii
ENSACIG00000000545	gnl3	93	46.347	ENSPCIG00000018642	GNL3	87	47.379	Phascolarctos_cinereus
ENSACIG00000000545	gnl3	100	66.184	ENSPFOG00000017601	gnl3	100	66.184	Poecilia_formosa
ENSACIG00000000545	gnl3	100	69.873	ENSPLAG00000016968	gnl3	100	69.873	Poecilia_latipinna
ENSACIG00000000545	gnl3	99	69.623	ENSPMEG00000018775	gnl3	99	69.754	Poecilia_mexicana
ENSACIG00000000545	gnl3	99	69.129	ENSPREG00000002909	gnl3	99	68.939	Poecilia_reticulata
ENSACIG00000000545	gnl3	99	43.728	ENSPPYG00000013800	GNL3	99	43.728	Pongo_abelii
ENSACIG00000000545	gnl3	85	46.652	ENSPCAG00000002006	GNL3	81	46.667	Procavia_capensis
ENSACIG00000000545	gnl3	99	44.424	ENSPCOG00000026637	GNL3	99	44.604	Propithecus_coquereli
ENSACIG00000000545	gnl3	99	45.293	ENSPVAG00000012586	GNL3	99	45.471	Pteropus_vampyrus
ENSACIG00000000545	gnl3	99	73.674	ENSPNYG00000005130	gnl3	99	73.674	Pundamilia_nyererei
ENSACIG00000000545	gnl3	99	51.237	ENSPNAG00000013096	gnl3	99	52.650	Pygocentrus_nattereri
ENSACIG00000000545	gnl3	99	43.321	ENSRNOG00000028461	Gnl3	99	44.123	Rattus_norvegicus
ENSACIG00000000545	gnl3	99	45.144	ENSRBIG00000031778	GNL3	99	45.144	Rhinopithecus_bieti
ENSACIG00000000545	gnl3	99	45.144	ENSRROG00000030086	GNL3	99	45.144	Rhinopithecus_roxellana
ENSACIG00000000545	gnl3	99	43.594	ENSSBOG00000019990	GNL3	99	44.345	Saimiri_boliviensis_boliviensis
ENSACIG00000000545	gnl3	99	43.942	ENSSHAG00000006141	GNL3	99	44.665	Sarcophilus_harrisii
ENSACIG00000000545	gnl3	100	57.741	ENSSFOG00015021228	gnl3	100	58.984	Scleropages_formosus
ENSACIG00000000545	gnl3	100	68.182	ENSSMAG00000006662	gnl3	100	68.182	Scophthalmus_maximus
ENSACIG00000000545	gnl3	100	72.333	ENSSDUG00000000972	gnl3	100	72.875	Seriola_dumerili
ENSACIG00000000545	gnl3	100	72.875	ENSSLDG00000008692	gnl3	92	73.418	Seriola_lalandi_dorsalis
ENSACIG00000000545	gnl3	94	45.021	ENSSARG00000002226	GNL3	87	46.667	Sorex_araneus
ENSACIG00000000545	gnl3	99	47.359	ENSSPUG00000003582	GNL3	99	47.887	Sphenodon_punctatus
ENSACIG00000000545	gnl3	100	72.122	ENSSPAG00000020180	gnl3	100	73.741	Stegastes_partitus
ENSACIG00000000545	gnl3	99	42.011	ENSSSCG00000011449	GNL3	99	42.832	Sus_scrofa
ENSACIG00000000545	gnl3	92	49.045	ENSTGUG00000005774	GNL3	99	47.153	Taeniopygia_guttata
ENSACIG00000000545	gnl3	100	61.011	ENSTRUG00000005552	gnl3	100	61.372	Takifugu_rubripes
ENSACIG00000000545	gnl3	100	61.913	ENSTNIG00000007263	gnl3	100	61.913	Tetraodon_nigroviridis
ENSACIG00000000545	gnl3	91	42.251	ENSTBEG00000017518	GNL3	99	41.788	Tupaia_belangeri
ENSACIG00000000545	gnl3	67	38.182	ENSTTRG00000008574	-	93	40.303	Tursiops_truncatus
ENSACIG00000000545	gnl3	99	43.542	ENSUAMG00000012347	GNL3	99	43.542	Ursus_americanus
ENSACIG00000000545	gnl3	99	43.571	ENSUMAG00000021001	GNL3	99	43.571	Ursus_maritimus
ENSACIG00000000545	gnl3	99	43.911	ENSVVUG00000024536	-	100	51.799	Vulpes_vulpes
ENSACIG00000000545	gnl3	96	67.804	ENSXCOG00000018425	gnl3	99	70.194	Xiphophorus_couchianus
ENSACIG00000000545	gnl3	100	68.603	ENSXMAG00000022565	gnl3	100	68.603	Xiphophorus_maculatus