EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000000720 (Gene tree)
Gene ID: -
Gene Symbol: casc3
Alias: -
Full Name: casc3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 13891 bases
Position: chrCCOE01000620.1:16414-30304
Accession: ZDB-GENE-040308-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000000850	Btz	PF09405.10	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000000891	-	1815	-	ENSACIP00000000850	604 (aa)	-	-

Gene Model

Click here to download ENSACIG00000000720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000000720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000000720	casc3	83	50.179	ENSG00000108349	CASC3	63	67.606	Homo_sapiens
ENSACIG00000000720	casc3	77	91.729	ENSAPOG00000008467	casc3	76	80.781	Acanthochromis_polyacanthus
ENSACIG00000000720	casc3	83	49.474	ENSAMEG00000007764	CASC3	78	50.899	Ailuropoda_melanoleuca
ENSACIG00000000720	casc3	94	85.714	ENSAOCG00000016676	casc3	77	82.831	Amphiprion_ocellaris
ENSACIG00000000720	casc3	94	85.714	ENSAPEG00000006787	casc3	77	82.530	Amphiprion_percula
ENSACIG00000000720	casc3	90	90.226	ENSATEG00000017196	casc3	63	88.889	Anabas_testudineus
ENSACIG00000000720	casc3	81	47.901	ENSANAG00000034820	-	97	44.844	Aotus_nancymaae
ENSACIG00000000720	casc3	82	95.152	ENSACLG00000016198	casc3	85	94.118	Astatotilapia_calliptera
ENSACIG00000000720	casc3	90	68.197	ENSAMXG00000032452	casc3	78	69.180	Astyanax_mexicanus
ENSACIG00000000720	casc3	83	49.376	ENSCJAG00000016032	CASC3	78	50.000	Callithrix_jacchus
ENSACIG00000000720	casc3	83	49.301	ENSCAFG00000016141	CASC3	78	48.501	Canis_familiaris
ENSACIG00000000720	casc3	83	50.471	ENSCAFG00020018882	CASC3	78	50.808	Canis_lupus_dingo
ENSACIG00000000720	casc3	83	50.438	ENSCAPG00000010514	CASC3	89	49.825	Cavia_aperea
ENSACIG00000000720	casc3	83	50.530	ENSCATG00000033593	CASC3	78	51.259	Cercocebus_atys
ENSACIG00000000720	casc3	83	50.272	ENSCLAG00000013730	CASC3	78	51.361	Chinchilla_lanigera
ENSACIG00000000720	casc3	83	50.530	ENSCSAG00000002777	CASC3	78	51.068	Chlorocebus_sabaeus
ENSACIG00000000720	casc3	83	48.288	ENSCPBG00000004750	CASC3	84	48.837	Chrysemys_picta_bellii
ENSACIG00000000720	casc3	83	50.707	ENSCANG00000008814	CASC3	78	51.079	Colobus_angolensis_palliatus
ENSACIG00000000720	casc3	83	50.269	ENSCGRG00001014706	Casc3	78	50.000	Cricetulus_griseus_chok1gshd
ENSACIG00000000720	casc3	98	46.073	ENSCGRG00000001952	Casc3	84	49.821	Cricetulus_griseus_crigri
ENSACIG00000000720	casc3	93	84.615	ENSCSEG00000010047	casc3	69	84.615	Cynoglossus_semilaevis
ENSACIG00000000720	casc3	86	63.782	ENSDARG00000029911	casc3	78	66.238	Danio_rerio
ENSACIG00000000720	casc3	83	49.002	ENSETEG00000013720	CASC3	78	50.091	Echinops_telfairi
ENSACIG00000000720	casc3	79	33.164	ENSEBUG00000010654	casc3	82	34.510	Eptatretus_burgeri
ENSACIG00000000720	casc3	83	51.224	ENSEASG00005002909	CASC3	76	52.060	Equus_asinus_asinus
ENSACIG00000000720	casc3	93	75.155	ENSELUG00000015093	casc3	70	78.322	Esox_lucius
ENSACIG00000000720	casc3	83	50.177	ENSFCAG00000014998	CASC3	78	51.079	Felis_catus
ENSACIG00000000720	casc3	83	45.804	ENSFALG00000000412	CASC3	87	47.703	Ficedula_albicollis
ENSACIG00000000720	casc3	83	49.821	ENSFDAG00000020696	CASC3	84	50.534	Fukomys_damarensis
ENSACIG00000000720	casc3	89	86.765	ENSFHEG00000015793	casc3	61	86.765	Fundulus_heteroclitus
ENSACIG00000000720	casc3	83	48.741	ENSGALG00000031813	CASC3	83	50.270	Gallus_gallus
ENSACIG00000000720	casc3	84	49.248	ENSGAGG00000008432	CASC3	84	49.286	Gopherus_agassizii
ENSACIG00000000720	casc3	83	50.000	ENSGGOG00000005067	CASC3	78	49.909	Gorilla_gorilla
ENSACIG00000000720	casc3	82	96.364	ENSHBUG00000013155	casc3	85	95.294	Haplochromis_burtoni
ENSACIG00000000720	casc3	83	49.645	ENSHGLG00000012117	CASC3	78	50.089	Heterocephalus_glaber_female
ENSACIG00000000720	casc3	83	49.645	ENSHGLG00100002268	CASC3	87	50.089	Heterocephalus_glaber_male
ENSACIG00000000720	casc3	83	50.628	ENSSTOG00000006374	CASC3	78	50.987	Ictidomys_tridecemlineatus
ENSACIG00000000720	casc3	80	92.086	ENSKMAG00000019507	casc3	66	92.086	Kryptolebias_marmoratus
ENSACIG00000000720	casc3	83	82.738	ENSLBEG00000005435	casc3	70	86.986	Labrus_bergylta
ENSACIG00000000720	casc3	80	43.580	ENSLACG00000013200	CASC3	75	43.876	Latimeria_chalumnae
ENSACIG00000000720	casc3	83	50.270	ENSLAFG00000000606	CASC3	78	50.808	Loxodonta_africana
ENSACIG00000000720	casc3	83	51.224	ENSMFAG00000041496	CASC3	78	51.259	Macaca_fascicularis
ENSACIG00000000720	casc3	83	50.530	ENSMMUG00000045187	CASC3	78	51.259	Macaca_mulatta
ENSACIG00000000720	casc3	83	50.530	ENSMLEG00000029049	CASC3	86	51.259	Mandrillus_leucophaeus
ENSACIG00000000720	casc3	79	88.811	ENSMAMG00000005235	casc3	72	88.811	Mastacembelus_armatus
ENSACIG00000000720	casc3	82	95.152	ENSMZEG00005003815	casc3	85	94.118	Maylandia_zebra
ENSACIG00000000720	casc3	82	47.576	ENSMGAG00000013247	CASC3	50	54.167	Meleagris_gallopavo
ENSACIG00000000720	casc3	75	48.228	ENSMAUG00000006023	Casc3	79	48.708	Mesocricetus_auratus
ENSACIG00000000720	casc3	83	49.553	ENSMICG00000003321	CASC3	78	49.372	Microcebus_murinus
ENSACIG00000000720	casc3	83	50.811	ENSMOCG00000013644	Casc3	78	50.633	Microtus_ochrogaster
ENSACIG00000000720	casc3	82	83.432	ENSMMOG00000014339	casc3	61	93.458	Mola_mola
ENSACIG00000000720	casc3	93	72.222	ENSMALG00000019771	casc3	98	73.411	Monopterus_albus
ENSACIG00000000720	casc3	83	51.499	MGP_CAROLIEiJ_G0017099	Casc3	78	51.699	Mus_caroli
ENSACIG00000000720	casc3	83	51.852	ENSMUSG00000078676	Casc3	78	51.878	Mus_musculus
ENSACIG00000000720	casc3	83	51.852	MGP_SPRETEiJ_G0017943	Casc3	78	51.878	Mus_spretus
ENSACIG00000000720	casc3	83	50.707	ENSMPUG00000014903	CASC3	78	51.259	Mustela_putorius_furo
ENSACIG00000000720	casc3	83	48.925	ENSNGAG00000023121	Casc3	78	50.000	Nannospalax_galili
ENSACIG00000000720	casc3	83	50.357	ENSNLEG00000001598	CASC3	78	50.180	Nomascus_leucogenys
ENSACIG00000000720	casc3	98	80.153	ENSONIG00000009337	casc3	99	80.000	Oreochromis_niloticus
ENSACIG00000000720	casc3	83	50.179	ENSPPAG00000035069	CASC3	78	49.909	Pan_paniscus
ENSACIG00000000720	casc3	83	50.000	ENSPPRG00000023670	CASC3	78	50.899	Panthera_pardus
ENSACIG00000000720	casc3	83	49.376	ENSPTIG00000010891	CASC3	78	50.540	Panthera_tigris_altaica
ENSACIG00000000720	casc3	83	50.177	ENSPANG00000021708	CASC3	78	51.083	Papio_anubis
ENSACIG00000000720	casc3	75	67.296	ENSPKIG00000023186	casc3	59	71.831	Paramormyrops_kingsleyae
ENSACIG00000000720	casc3	83	49.192	ENSPCIG00000025678	CASC3	79	50.090	Phascolarctos_cinereus
ENSACIG00000000720	casc3	98	67.016	ENSPFOG00000017632	casc3	100	67.117	Poecilia_formosa
ENSACIG00000000720	casc3	89	88.406	ENSPLAG00000005268	casc3	71	88.406	Poecilia_latipinna
ENSACIG00000000720	casc3	84	68.953	ENSPMEG00000010299	casc3	93	66.909	Poecilia_mexicana
ENSACIG00000000720	casc3	98	74.057	ENSPREG00000011856	casc3	99	72.354	Poecilia_reticulata
ENSACIG00000000720	casc3	83	50.353	ENSPPYG00000008467	CASC3	78	52.065	Pongo_abelii
ENSACIG00000000720	casc3	83	49.733	ENSPVAG00000008556	CASC3	78	48.233	Pteropus_vampyrus
ENSACIG00000000720	casc3	82	96.364	ENSPNYG00000011962	casc3	85	95.294	Pundamilia_nyererei
ENSACIG00000000720	casc3	83	56.928	ENSPNAG00000015928	casc3	57	79.412	Pygocentrus_nattereri
ENSACIG00000000720	casc3	83	52.052	ENSRNOG00000009716	Casc3	76	52.239	Rattus_norvegicus
ENSACIG00000000720	casc3	83	50.530	ENSRBIG00000033289	CASC3	79	51.259	Rhinopithecus_bieti
ENSACIG00000000720	casc3	83	50.530	ENSRROG00000022337	CASC3	79	51.259	Rhinopithecus_roxellana
ENSACIG00000000720	casc3	83	49.734	ENSSBOG00000031406	CASC3	87	50.633	Saimiri_boliviensis_boliviensis
ENSACIG00000000720	casc3	83	49.640	ENSSHAG00000013338	CASC3	88	49.639	Sarcophilus_harrisii
ENSACIG00000000720	casc3	84	65.574	ENSSFOG00015002645	casc3	60	75.182	Scleropages_formosus
ENSACIG00000000720	casc3	77	82.979	ENSSMAG00000016096	casc3	70	82.237	Scophthalmus_maximus
ENSACIG00000000720	casc3	92	86.842	ENSSDUG00000016893	casc3	69	91.971	Seriola_dumerili
ENSACIG00000000720	casc3	83	75.299	ENSSLDG00000020308	casc3	99	68.652	Seriola_lalandi_dorsalis
ENSACIG00000000720	casc3	73	70.000	ENSSARG00000010378	CASC3	59	70.000	Sorex_araneus
ENSACIG00000000720	casc3	77	90.226	ENSSPAG00000023008	casc3	62	86.301	Stegastes_partitus
ENSACIG00000000720	casc3	78	46.341	ENSTGUG00000002300	CASC3	99	47.793	Taeniopygia_guttata
ENSACIG00000000720	casc3	83	69.557	ENSTNIG00000003208	casc3	79	67.877	Tetraodon_nigroviridis
ENSACIG00000000720	casc3	55	74.000	ENSTTRG00000016896	CASC3	60	74.000	Tursiops_truncatus
ENSACIG00000000720	casc3	83	51.220	ENSUAMG00000015116	CASC3	76	51.391	Ursus_americanus
ENSACIG00000000720	casc3	83	50.657	ENSUMAG00000017697	CASC3	91	50.835	Ursus_maritimus
ENSACIG00000000720	casc3	63	56.034	ENSVPAG00000000799	CASC3	61	58.621	Vicugna_pacos
ENSACIG00000000720	casc3	83	49.298	ENSVVUG00000000997	CASC3	78	50.628	Vulpes_vulpes
ENSACIG00000000720	casc3	84	47.943	ENSXETG00000024395	casc3	99	44.684	Xenopus_tropicalis