EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000001186 (Gene tree)
Gene ID: -
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: PRP18 pre-mRNA processing factor 18 homolog (yeast)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 5216 bases
Position: chrCCOE01000364.1:1271011-1276226
Accession: ZDB-GENE-040704-45
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000001445	PRP4	PF08799.11	2.5e-13	1	1
ENSACIP00000001445	Prp18	PF02840.15	2.5e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000001503	-	1026	-	ENSACIP00000001445	341 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001186's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001186's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001186	prpf18	100	84.503	ENSG00000165630	PRPF18	100	84.503	Homo_sapiens
ENSACIG00000001186	prpf18	100	95.894	ENSAPOG00000024177	prpf18	100	95.894	Acanthochromis_polyacanthus
ENSACIG00000001186	prpf18	100	84.503	ENSAMEG00000013591	-	100	84.503	Ailuropoda_melanoleuca
ENSACIG00000001186	prpf18	98	95.509	ENSAOCG00000006572	prpf18	94	93.275	Amphiprion_ocellaris
ENSACIG00000001186	prpf18	100	95.601	ENSAPEG00000004564	prpf18	100	95.601	Amphiprion_percula
ENSACIG00000001186	prpf18	100	95.015	ENSATEG00000000303	prpf18	100	95.015	Anabas_testudineus
ENSACIG00000001186	prpf18	99	83.529	ENSAPLG00000003387	-	99	83.529	Anas_platyrhynchos
ENSACIG00000001186	prpf18	100	84.012	ENSACAG00000000818	-	100	84.012	Anolis_carolinensis
ENSACIG00000001186	prpf18	100	84.211	ENSANAG00000037445	-	100	84.211	Aotus_nancymaae
ENSACIG00000001186	prpf18	100	96.481	ENSACLG00000026296	prpf18	100	96.481	Astatotilapia_calliptera
ENSACIG00000001186	prpf18	100	88.286	ENSAMXG00000012848	prpf18	100	88.286	Astyanax_mexicanus
ENSACIG00000001186	prpf18	100	84.211	ENSBTAG00000017244	PRPF18	100	84.211	Bos_taurus
ENSACIG00000001186	prpf18	98	40.230	WBGene00009320	F32B6.3	97	39.481	Caenorhabditis_elegans
ENSACIG00000001186	prpf18	100	84.211	ENSCJAG00000009432	-	100	84.211	Callithrix_jacchus
ENSACIG00000001186	prpf18	100	84.503	ENSCAFG00000004735	-	100	84.503	Canis_familiaris
ENSACIG00000001186	prpf18	100	84.503	ENSCAFG00020007712	-	100	84.503	Canis_lupus_dingo
ENSACIG00000001186	prpf18	100	84.211	ENSCHIG00000000499	-	100	84.211	Capra_hircus
ENSACIG00000001186	prpf18	100	83.918	ENSTSYG00000003517	-	100	83.918	Carlito_syrichta
ENSACIG00000001186	prpf18	100	84.503	ENSCPOG00000021069	-	100	84.503	Cavia_porcellus
ENSACIG00000001186	prpf18	100	84.211	ENSCCAG00000036822	-	100	84.211	Cebus_capucinus
ENSACIG00000001186	prpf18	100	73.977	ENSCATG00000016633	-	100	73.977	Cercocebus_atys
ENSACIG00000001186	prpf18	100	84.211	ENSCLAG00000011770	-	100	84.211	Chinchilla_lanigera
ENSACIG00000001186	prpf18	100	82.336	ENSCSAG00000013109	-	100	82.336	Chlorocebus_sabaeus
ENSACIG00000001186	prpf18	100	80.618	ENSCPBG00000003100	-	100	81.461	Chrysemys_picta_bellii
ENSACIG00000001186	prpf18	99	55.882	ENSCING00000020481	-	97	55.072	Ciona_intestinalis
ENSACIG00000001186	prpf18	99	56.395	ENSCSAVG00000010546	-	99	55.425	Ciona_savignyi
ENSACIG00000001186	prpf18	100	84.503	ENSCANG00000034900	-	100	84.503	Colobus_angolensis_palliatus
ENSACIG00000001186	prpf18	100	84.503	ENSCGRG00001023665	Prpf18	100	84.503	Cricetulus_griseus_chok1gshd
ENSACIG00000001186	prpf18	100	84.503	ENSCGRG00000014690	Prpf18	100	84.503	Cricetulus_griseus_crigri
ENSACIG00000001186	prpf18	100	90.616	ENSCSEG00000005536	prpf18	99	90.616	Cynoglossus_semilaevis
ENSACIG00000001186	prpf18	100	92.669	ENSCVAG00000012401	prpf18	100	92.669	Cyprinodon_variegatus
ENSACIG00000001186	prpf18	100	89.766	ENSDARG00000058306	prpf18	100	89.766	Danio_rerio
ENSACIG00000001186	prpf18	100	84.211	ENSDNOG00000035607	-	100	84.211	Dasypus_novemcinctus
ENSACIG00000001186	prpf18	100	83.626	ENSDORG00000000858	Prpf18	100	83.626	Dipodomys_ordii
ENSACIG00000001186	prpf18	99	52.663	FBgn0027784	Prp18	98	52.071	Drosophila_melanogaster
ENSACIG00000001186	prpf18	100	76.316	ENSETEG00000015060	-	100	76.316	Echinops_telfairi
ENSACIG00000001186	prpf18	100	70.893	ENSEBUG00000016502	prpf18	99	70.029	Eptatretus_burgeri
ENSACIG00000001186	prpf18	100	84.795	ENSEASG00005019373	-	100	84.795	Equus_asinus_asinus
ENSACIG00000001186	prpf18	100	84.795	ENSECAG00000006997	PRPF18	100	84.795	Equus_caballus
ENSACIG00000001186	prpf18	92	51.899	ENSEEUG00000001171	-	100	51.899	Erinaceus_europaeus
ENSACIG00000001186	prpf18	100	89.213	ENSELUG00000022190	prpf18	100	89.213	Esox_lucius
ENSACIG00000001186	prpf18	100	84.211	ENSFCAG00000004436	-	100	84.211	Felis_catus
ENSACIG00000001186	prpf18	92	80.308	ENSFALG00000001912	-	97	80.615	Ficedula_albicollis
ENSACIG00000001186	prpf18	94	85.938	ENSFDAG00000014026	-	100	85.938	Fukomys_damarensis
ENSACIG00000001186	prpf18	99	57.101	ENSFDAG00000010713	-	97	57.101	Fukomys_damarensis
ENSACIG00000001186	prpf18	80	94.505	ENSFHEG00000020125	prpf18	98	94.382	Fundulus_heteroclitus
ENSACIG00000001186	prpf18	99	87.059	ENSGMOG00000012210	prpf18	99	87.059	Gadus_morhua
ENSACIG00000001186	prpf18	100	84.503	ENSGALG00000043593	-	100	84.503	Gallus_gallus
ENSACIG00000001186	prpf18	100	92.962	ENSGAFG00000006034	prpf18	100	92.962	Gambusia_affinis
ENSACIG00000001186	prpf18	100	90.909	ENSGACG00000012232	prpf18	100	90.909	Gasterosteus_aculeatus
ENSACIG00000001186	prpf18	100	84.503	ENSGAGG00000016878	-	100	84.503	Gopherus_agassizii
ENSACIG00000001186	prpf18	92	83.544	ENSGGOG00000025188	-	96	83.544	Gorilla_gorilla
ENSACIG00000001186	prpf18	100	96.481	ENSHBUG00000010264	prpf18	100	96.481	Haplochromis_burtoni
ENSACIG00000001186	prpf18	100	83.918	ENSHGLG00000018534	PRPF18	100	83.918	Heterocephalus_glaber_female
ENSACIG00000001186	prpf18	94	85.625	ENSHGLG00100012161	-	98	85.625	Heterocephalus_glaber_male
ENSACIG00000001186	prpf18	100	93.842	ENSHCOG00000015987	prpf18	100	93.842	Hippocampus_comes
ENSACIG00000001186	prpf18	100	82.720	ENSIPUG00000007432	prpf18	100	83.569	Ictalurus_punctatus
ENSACIG00000001186	prpf18	100	83.626	ENSSTOG00000008735	-	100	83.626	Ictidomys_tridecemlineatus
ENSACIG00000001186	prpf18	100	62.391	ENSJJAG00000015191	-	100	62.391	Jaculus_jaculus
ENSACIG00000001186	prpf18	100	84.503	ENSJJAG00000024041	-	100	84.503	Jaculus_jaculus
ENSACIG00000001186	prpf18	100	93.255	ENSKMAG00000012124	prpf18	100	93.255	Kryptolebias_marmoratus
ENSACIG00000001186	prpf18	98	90.179	ENSLBEG00000028466	prpf18	99	90.179	Labrus_bergylta
ENSACIG00000001186	prpf18	100	83.918	ENSLACG00000009885	prpf18	100	84.795	Latimeria_chalumnae
ENSACIG00000001186	prpf18	100	88.596	ENSLOCG00000016736	prpf18	100	88.596	Lepisosteus_oculatus
ENSACIG00000001186	prpf18	100	84.503	ENSLAFG00000007753	-	100	84.503	Loxodonta_africana
ENSACIG00000001186	prpf18	100	84.503	ENSMFAG00000000540	-	100	84.503	Macaca_fascicularis
ENSACIG00000001186	prpf18	100	84.503	ENSMMUG00000015071	PRPF18	93	92.053	Macaca_mulatta
ENSACIG00000001186	prpf18	100	84.503	ENSMNEG00000024679	-	100	84.503	Macaca_nemestrina
ENSACIG00000001186	prpf18	100	69.298	ENSMLEG00000031715	-	100	69.298	Mandrillus_leucophaeus
ENSACIG00000001186	prpf18	100	94.135	ENSMAMG00000006610	prpf18	100	94.135	Mastacembelus_armatus
ENSACIG00000001186	prpf18	100	96.481	ENSMZEG00005019392	prpf18	100	96.481	Maylandia_zebra
ENSACIG00000001186	prpf18	100	84.503	ENSMGAG00000005023	-	100	84.503	Meleagris_gallopavo
ENSACIG00000001186	prpf18	100	84.795	ENSMICG00000006572	-	100	84.795	Microcebus_murinus
ENSACIG00000001186	prpf18	100	84.503	ENSMOCG00000021468	Prpf18	100	84.503	Microtus_ochrogaster
ENSACIG00000001186	prpf18	100	94.428	ENSMMOG00000013012	prpf18	100	94.428	Mola_mola
ENSACIG00000001186	prpf18	100	77.778	ENSMODG00000024043	-	100	77.778	Monodelphis_domestica
ENSACIG00000001186	prpf18	99	77.299	ENSMODG00000016902	-	95	77.299	Monodelphis_domestica
ENSACIG00000001186	prpf18	100	82.849	ENSMALG00000005486	prpf18	100	85.756	Monopterus_albus
ENSACIG00000001186	prpf18	100	83.918	MGP_CAROLIEiJ_G0023143	Prpf18	100	91.781	Mus_caroli
ENSACIG00000001186	prpf18	100	83.918	ENSMUSG00000039449	Prpf18	100	91.781	Mus_musculus
ENSACIG00000001186	prpf18	100	84.211	MGP_PahariEiJ_G0019203	Prpf18	100	91.781	Mus_pahari
ENSACIG00000001186	prpf18	100	83.626	MGP_SPRETEiJ_G0024061	Prpf18	100	91.781	Mus_spretus
ENSACIG00000001186	prpf18	100	84.211	ENSMPUG00000000938	-	100	84.211	Mustela_putorius_furo
ENSACIG00000001186	prpf18	100	84.211	ENSMLUG00000009200	-	100	84.211	Myotis_lucifugus
ENSACIG00000001186	prpf18	68	81.034	ENSNGAG00000023550	-	82	81.739	Nannospalax_galili
ENSACIG00000001186	prpf18	100	84.503	ENSNGAG00000012500	-	100	84.503	Nannospalax_galili
ENSACIG00000001186	prpf18	100	96.188	ENSNBRG00000001778	prpf18	100	96.188	Neolamprologus_brichardi
ENSACIG00000001186	prpf18	100	84.503	ENSNLEG00000012186	-	100	84.503	Nomascus_leucogenys
ENSACIG00000001186	prpf18	76	72.587	ENSMEUG00000005032	-	75	71.042	Notamacropus_eugenii
ENSACIG00000001186	prpf18	77	65.283	ENSOPRG00000002153	-	100	65.283	Ochotona_princeps
ENSACIG00000001186	prpf18	100	83.626	ENSODEG00000003770	-	100	83.626	Octodon_degus
ENSACIG00000001186	prpf18	98	96.707	ENSONIG00000014854	prpf18	96	96.707	Oreochromis_niloticus
ENSACIG00000001186	prpf18	100	84.795	ENSOANG00000015404	-	100	84.795	Ornithorhynchus_anatinus
ENSACIG00000001186	prpf18	100	84.211	ENSOCUG00000027756	-	96	84.709	Oryctolagus_cuniculus
ENSACIG00000001186	prpf18	100	90.857	ENSORLG00000010293	prpf18	100	90.857	Oryzias_latipes
ENSACIG00000001186	prpf18	100	92.962	ENSORLG00020001530	prpf18	100	92.962	Oryzias_latipes_hni
ENSACIG00000001186	prpf18	100	92.669	ENSORLG00015013705	prpf18	100	92.669	Oryzias_latipes_hsok
ENSACIG00000001186	prpf18	100	94.721	ENSOMEG00000009167	prpf18	100	94.721	Oryzias_melastigma
ENSACIG00000001186	prpf18	100	83.333	ENSOGAG00000007294	-	100	83.333	Otolemur_garnettii
ENSACIG00000001186	prpf18	100	82.051	ENSOARG00000006243	-	100	82.051	Ovis_aries
ENSACIG00000001186	prpf18	100	84.503	ENSPPAG00000041959	-	100	84.503	Pan_paniscus
ENSACIG00000001186	prpf18	100	84.211	ENSPPRG00000000107	-	100	84.211	Panthera_pardus
ENSACIG00000001186	prpf18	100	84.211	ENSPTIG00000021094	-	100	84.211	Panthera_tigris_altaica
ENSACIG00000001186	prpf18	100	84.503	ENSPTRG00000002306	PRPF18	100	84.503	Pan_troglodytes
ENSACIG00000001186	prpf18	100	84.211	ENSPANG00000023346	-	100	84.211	Papio_anubis
ENSACIG00000001186	prpf18	100	86.325	ENSPKIG00000014128	prpf18	96	86.325	Paramormyrops_kingsleyae
ENSACIG00000001186	prpf18	100	84.503	ENSPSIG00000016064	-	100	84.503	Pelodiscus_sinensis
ENSACIG00000001186	prpf18	100	86.550	ENSPMGG00000016486	prpf18	100	86.550	Periophthalmus_magnuspinnatus
ENSACIG00000001186	prpf18	100	84.211	ENSPEMG00000013704	Prpf18	100	84.211	Peromyscus_maniculatus_bairdii
ENSACIG00000001186	prpf18	100	74.928	ENSPMAG00000000204	prpf18	100	74.928	Petromyzon_marinus
ENSACIG00000001186	prpf18	92	83.861	ENSPCIG00000012963	-	99	83.861	Phascolarctos_cinereus
ENSACIG00000001186	prpf18	100	90.000	ENSPFOG00000017611	prpf18	100	90.000	Poecilia_formosa
ENSACIG00000001186	prpf18	100	92.082	ENSPLAG00000000369	prpf18	100	92.082	Poecilia_latipinna
ENSACIG00000001186	prpf18	100	92.375	ENSPMEG00000005183	prpf18	100	92.375	Poecilia_mexicana
ENSACIG00000001186	prpf18	100	92.375	ENSPREG00000015232	prpf18	100	92.375	Poecilia_reticulata
ENSACIG00000001186	prpf18	100	84.211	ENSPPYG00000002101	PRPF18	100	84.211	Pongo_abelii
ENSACIG00000001186	prpf18	100	66.667	ENSPCAG00000010833	-	100	66.667	Procavia_capensis
ENSACIG00000001186	prpf18	100	79.532	ENSPCOG00000013057	-	100	79.532	Propithecus_coquereli
ENSACIG00000001186	prpf18	100	52.047	ENSPVAG00000002947	-	100	52.047	Pteropus_vampyrus
ENSACIG00000001186	prpf18	100	96.188	ENSPNYG00000003554	prpf18	100	96.188	Pundamilia_nyererei
ENSACIG00000001186	prpf18	100	87.464	ENSPNAG00000023151	prpf18	100	87.464	Pygocentrus_nattereri
ENSACIG00000001186	prpf18	100	84.503	ENSRNOG00000018396	Prpf18	100	84.503	Rattus_norvegicus
ENSACIG00000001186	prpf18	100	84.795	ENSRBIG00000028028	-	100	84.795	Rhinopithecus_bieti
ENSACIG00000001186	prpf18	100	84.503	ENSRROG00000040695	-	100	84.503	Rhinopithecus_roxellana
ENSACIG00000001186	prpf18	100	84.211	ENSSBOG00000034482	-	100	84.211	Saimiri_boliviensis_boliviensis
ENSACIG00000001186	prpf18	100	70.468	ENSSHAG00000009669	-	100	70.468	Sarcophilus_harrisii
ENSACIG00000001186	prpf18	100	85.088	ENSSHAG00000016463	-	100	85.088	Sarcophilus_harrisii
ENSACIG00000001186	prpf18	77	45.833	ENSSFOG00015021154	-	89	48.498	Scleropages_formosus
ENSACIG00000001186	prpf18	98	86.087	ENSSFOG00015022118	prpf18	100	81.844	Scleropages_formosus
ENSACIG00000001186	prpf18	100	91.496	ENSSMAG00000005308	prpf18	100	91.496	Scophthalmus_maximus
ENSACIG00000001186	prpf18	100	96.188	ENSSDUG00000015428	prpf18	100	96.188	Seriola_dumerili
ENSACIG00000001186	prpf18	100	95.894	ENSSLDG00000023989	prpf18	100	95.894	Seriola_lalandi_dorsalis
ENSACIG00000001186	prpf18	100	56.140	ENSSARG00000005307	-	100	56.140	Sorex_araneus
ENSACIG00000001186	prpf18	100	84.795	ENSSPUG00000002619	-	100	84.795	Sphenodon_punctatus
ENSACIG00000001186	prpf18	100	95.308	ENSSPAG00000019502	prpf18	100	95.308	Stegastes_partitus
ENSACIG00000001186	prpf18	100	84.503	ENSSSCG00000026354	-	100	84.503	Sus_scrofa
ENSACIG00000001186	prpf18	100	83.918	ENSTGUG00000002286	-	100	83.918	Taeniopygia_guttata
ENSACIG00000001186	prpf18	100	89.736	ENSTRUG00000011278	prpf18	100	89.736	Takifugu_rubripes
ENSACIG00000001186	prpf18	100	90.616	ENSTNIG00000000911	prpf18	100	90.616	Tetraodon_nigroviridis
ENSACIG00000001186	prpf18	79	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSACIG00000001186	prpf18	100	84.795	ENSTTRG00000011117	PRPF18	100	84.795	Tursiops_truncatus
ENSACIG00000001186	prpf18	91	87.138	ENSUAMG00000001815	-	93	87.138	Ursus_americanus
ENSACIG00000001186	prpf18	100	79.825	ENSUMAG00000012329	-	100	79.825	Ursus_maritimus
ENSACIG00000001186	prpf18	100	78.947	ENSVPAG00000011486	-	100	78.947	Vicugna_pacos
ENSACIG00000001186	prpf18	100	84.503	ENSVVUG00000005453	-	100	84.503	Vulpes_vulpes
ENSACIG00000001186	prpf18	100	77.101	ENSXETG00000024057	prpf18	100	76.812	Xenopus_tropicalis
ENSACIG00000001186	prpf18	100	92.128	ENSXCOG00000020414	prpf18	100	92.128	Xiphophorus_couchianus
ENSACIG00000001186	prpf18	100	92.669	ENSXMAG00000004713	prpf18	91	92.669	Xiphophorus_maculatus