EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000001296 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 2686 bases
Position: chrCCOE01000286.1:105551-108236
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000001569	zf-C2H2	PF00096.26	1.1e-22	1	3
ENSACIP00000001569	zf-C2H2	PF00096.26	1.1e-22	2	3
ENSACIP00000001569	zf-C2H2	PF00096.26	1.1e-22	3	3
ENSACIP00000001569	zf-met	PF12874.7	0.00028	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000001637	-	927	-	ENSACIP00000001569	308 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001296's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000001296	-	76	35.838	ENSACIG00000006755	-	99	35.838
ENSACIG00000001296	-	62	37.209	ENSACIG00000011541	-	73	37.209
ENSACIG00000001296	-	55	37.037	ENSACIG00000000406	prdm5	68	37.037
ENSACIG00000001296	-	56	38.525	ENSACIG00000013149	-	87	38.525
ENSACIG00000001296	-	54	37.755	ENSACIG00000003515	-	91	38.235
ENSACIG00000001296	-	50	45.205	ENSACIG00000014123	znf236	51	45.205
ENSACIG00000001296	-	58	37.931	ENSACIG00000006826	-	62	37.931
ENSACIG00000001296	-	51	35.632	ENSACIG00000015835	-	64	35.632
ENSACIG00000001296	-	50	45.455	ENSACIG00000019791	-	91	47.297
ENSACIG00000001296	-	51	42.857	ENSACIG00000024444	-	62	42.857
ENSACIG00000001296	-	64	35.115	ENSACIG00000010647	-	97	35.606
ENSACIG00000001296	-	61	37.903	ENSACIG00000000311	-	75	37.903
ENSACIG00000001296	-	51	30.172	ENSACIG00000007855	-	90	35.294
ENSACIG00000001296	-	66	33.094	ENSACIG00000009717	-	93	33.094
ENSACIG00000001296	-	51	38.961	ENSACIG00000017647	-	87	39.394
ENSACIG00000001296	-	61	41.026	ENSACIG00000016182	-	92	38.393
ENSACIG00000001296	-	65	38.686	ENSACIG00000013604	-	99	38.686
ENSACIG00000001296	-	62	38.462	ENSACIG00000006172	-	99	38.462
ENSACIG00000001296	-	53	41.558	ENSACIG00000019534	-	81	41.558
ENSACIG00000001296	-	65	39.568	ENSACIG00000004041	-	95	39.568
ENSACIG00000001296	-	55	34.091	ENSACIG00000012263	znf319b	70	34.091
ENSACIG00000001296	-	96	53.035	ENSACIG00000006586	-	97	54.313
ENSACIG00000001296	-	58	37.037	ENSACIG00000003720	-	82	37.037
ENSACIG00000001296	-	52	42.308	ENSACIG00000003556	-	67	39.669
ENSACIG00000001296	-	54	37.975	ENSACIG00000001767	zbtb41	61	37.975
ENSACIG00000001296	-	96	54.785	ENSACIG00000013613	scrt1b	96	54.785
ENSACIG00000001296	-	56	39.098	ENSACIG00000015429	-	81	46.753
ENSACIG00000001296	-	100	61.736	ENSACIG00000012604	scrt2	100	61.415
ENSACIG00000001296	-	51	34.586	ENSACIG00000009755	-	77	34.848
ENSACIG00000001296	-	61	33.898	ENSACIG00000018952	-	74	33.898
ENSACIG00000001296	-	51	39.623	ENSACIG00000004666	-	97	40.000
ENSACIG00000001296	-	55	35.465	ENSACIG00000022625	-	80	42.453
ENSACIG00000001296	-	58	30.769	ENSACIG00000001860	-	70	30.769
ENSACIG00000001296	-	77	42.857	ENSACIG00000023049	znf646	99	36.957
ENSACIG00000001296	-	63	34.234	ENSACIG00000016133	-	72	34.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001296	-	96	54.785	ENSAPOG00000015197	-	96	55.776	Acanthochromis_polyacanthus
ENSACIG00000001296	-	96	58.140	ENSAPOG00000009279	scrt1b	96	58.472	Acanthochromis_polyacanthus
ENSACIG00000001296	-	100	63.692	ENSAPOG00000003680	scrt2	100	62.963	Acanthochromis_polyacanthus
ENSACIG00000001296	-	96	58.140	ENSAOCG00000003910	scrt1b	96	58.140	Amphiprion_ocellaris
ENSACIG00000001296	-	100	63.692	ENSAOCG00000021557	scrt2	100	62.963	Amphiprion_ocellaris
ENSACIG00000001296	-	96	54.286	ENSAOCG00000023304	-	97	55.238	Amphiprion_ocellaris
ENSACIG00000001296	-	96	58.472	ENSAPEG00000000869	scrt1b	96	58.472	Amphiprion_percula
ENSACIG00000001296	-	96	54.286	ENSAPEG00000005677	-	97	55.238	Amphiprion_percula
ENSACIG00000001296	-	100	63.692	ENSAPEG00000022558	scrt2	100	62.963	Amphiprion_percula
ENSACIG00000001296	-	100	64.724	ENSATEG00000023998	scrt2	100	64.615	Anabas_testudineus
ENSACIG00000001296	-	100	77.064	ENSATEG00000003195	-	100	76.758	Anabas_testudineus
ENSACIG00000001296	-	96	57.383	ENSATEG00000002302	scrt1b	96	58.140	Anabas_testudineus
ENSACIG00000001296	-	96	54.785	ENSATEG00000011660	-	96	55.776	Anabas_testudineus
ENSACIG00000001296	-	73	65.929	ENSACAG00000016109	SCRT2	96	65.929	Anolis_carolinensis
ENSACIG00000001296	-	96	57.143	ENSACLG00000007162	scrt1b	96	57.143	Astatotilapia_calliptera
ENSACIG00000001296	-	96	53.016	ENSACLG00000012046	-	97	53.651	Astatotilapia_calliptera
ENSACIG00000001296	-	81	67.578	ENSAMXG00000034158	scrt2	92	66.538	Astyanax_mexicanus
ENSACIG00000001296	-	96	58.054	ENSAMXG00000042624	SCRT1	97	58.054	Astyanax_mexicanus
ENSACIG00000001296	-	96	57.333	ENSAMXG00000038085	scrt1a	96	58.333	Astyanax_mexicanus
ENSACIG00000001296	-	87	51.852	ENSCPBG00000027613	SCRT2	100	52.222	Chrysemys_picta_bellii
ENSACIG00000001296	-	96	58.140	ENSCPBG00000018899	SCRT1	96	58.140	Chrysemys_picta_bellii
ENSACIG00000001296	-	96	56.856	ENSCSEG00000008596	scrt1b	96	57.475	Cynoglossus_semilaevis
ENSACIG00000001296	-	96	54.286	ENSCSEG00000014892	-	97	54.286	Cynoglossus_semilaevis
ENSACIG00000001296	-	100	62.883	ENSCSEG00000021542	scrt2	100	62.963	Cynoglossus_semilaevis
ENSACIG00000001296	-	100	63.272	ENSCVAG00000021038	scrt2	100	62.963	Cyprinodon_variegatus
ENSACIG00000001296	-	96	53.674	ENSCVAG00000003190	-	97	54.633	Cyprinodon_variegatus
ENSACIG00000001296	-	96	58.609	ENSCVAG00000009561	scrt1b	96	58.804	Cyprinodon_variegatus
ENSACIG00000001296	-	96	58.333	ENSDARG00000100821	scrt1a	96	58.333	Danio_rerio
ENSACIG00000001296	-	96	57.756	ENSDARG00000040214	scrt1b	96	57.756	Danio_rerio
ENSACIG00000001296	-	97	57.807	ENSELUG00000022228	scrt1a	97	57.475	Esox_lucius
ENSACIG00000001296	-	98	62.963	ENSELUG00000023883	scrt2	98	64.417	Esox_lucius
ENSACIG00000001296	-	96	58.333	ENSELUG00000005435	scrt1b	96	57.667	Esox_lucius
ENSACIG00000001296	-	66	69.118	ENSFALG00000005718	SCRT2	85	68.224	Ficedula_albicollis
ENSACIG00000001296	-	96	56.954	ENSFHEG00000014820	scrt1b	96	57.475	Fundulus_heteroclitus
ENSACIG00000001296	-	100	62.379	ENSFHEG00000005732	scrt2	100	62.058	Fundulus_heteroclitus
ENSACIG00000001296	-	96	53.674	ENSFHEG00000009794	-	97	54.952	Fundulus_heteroclitus
ENSACIG00000001296	-	96	57.333	ENSGMOG00000000629	scrt1b	96	57.333	Gadus_morhua
ENSACIG00000001296	-	98	59.385	ENSGMOG00000019519	scrt2	97	59.385	Gadus_morhua
ENSACIG00000001296	-	96	53.020	ENSGALG00000028912	SCRT2	97	53.667	Gallus_gallus
ENSACIG00000001296	-	96	54.305	ENSGAFG00000009650	-	96	54.967	Gambusia_affinis
ENSACIG00000001296	-	96	58.609	ENSGAFG00000007636	scrt1b	96	58.804	Gambusia_affinis
ENSACIG00000001296	-	100	59.877	ENSGAFG00000003093	scrt2	100	59.568	Gambusia_affinis
ENSACIG00000001296	-	96	56.333	ENSGACG00000008982	scrt1b	88	63.241	Gasterosteus_aculeatus
ENSACIG00000001296	-	96	54.487	ENSGACG00000004072	-	97	55.769	Gasterosteus_aculeatus
ENSACIG00000001296	-	96	58.000	ENSGAGG00000011736	SCRT1	97	58.389	Gopherus_agassizii
ENSACIG00000001296	-	100	53.074	ENSGAGG00000020761	SCRT2	100	53.074	Gopherus_agassizii
ENSACIG00000001296	-	64	68.182	ENSGAGG00000020760	-	74	68.687	Gopherus_agassizii
ENSACIG00000001296	-	100	63.385	ENSHBUG00000012492	scrt2	100	62.654	Haplochromis_burtoni
ENSACIG00000001296	-	96	57.143	ENSHBUG00000016621	scrt1b	96	57.143	Haplochromis_burtoni
ENSACIG00000001296	-	96	52.716	ENSHBUG00000019101	-	97	53.355	Haplochromis_burtoni
ENSACIG00000001296	-	96	58.472	ENSHCOG00000016704	scrt1b	96	58.472	Hippocampus_comes
ENSACIG00000001296	-	96	52.922	ENSHCOG00000016179	-	73	70.244	Hippocampus_comes
ENSACIG00000001296	-	100	60.123	ENSHCOG00000008116	scrt2	100	58.282	Hippocampus_comes
ENSACIG00000001296	-	96	56.566	ENSIPUG00000005547	-	97	56.902	Ictalurus_punctatus
ENSACIG00000001296	-	96	58.882	ENSIPUG00000004551	scrt1a	97	58.882	Ictalurus_punctatus
ENSACIG00000001296	-	96	57.616	ENSKMAG00000005484	scrt1b	96	58.472	Kryptolebias_marmoratus
ENSACIG00000001296	-	96	53.698	ENSKMAG00000009489	-	97	53.994	Kryptolebias_marmoratus
ENSACIG00000001296	-	100	63.692	ENSKMAG00000018087	scrt2	100	62.963	Kryptolebias_marmoratus
ENSACIG00000001296	-	100	63.497	ENSLBEG00000015419	scrt2	100	63.385	Labrus_bergylta
ENSACIG00000001296	-	96	53.016	ENSLBEG00000023388	-	97	53.651	Labrus_bergylta
ENSACIG00000001296	-	96	57.333	ENSLACG00000003588	SCRT1	96	57.333	Latimeria_chalumnae
ENSACIG00000001296	-	96	59.333	ENSLOCG00000007573	scrt1b	96	59.333	Lepisosteus_oculatus
ENSACIG00000001296	-	100	55.418	ENSLOCG00000002246	scrt2	100	55.728	Lepisosteus_oculatus
ENSACIG00000001296	-	96	56.711	ENSMAMG00000011698	scrt1b	96	57.807	Mastacembelus_armatus
ENSACIG00000001296	-	100	63.889	ENSMAMG00000001291	scrt2	100	63.580	Mastacembelus_armatus
ENSACIG00000001296	-	96	57.143	ENSMZEG00005005627	scrt1b	96	57.143	Maylandia_zebra
ENSACIG00000001296	-	100	63.385	ENSMZEG00005026445	scrt2	100	62.654	Maylandia_zebra
ENSACIG00000001296	-	96	52.716	ENSMZEG00005026702	-	97	53.355	Maylandia_zebra
ENSACIG00000001296	-	66	68.966	ENSMGAG00000016579	SCRT2	85	67.453	Meleagris_gallopavo
ENSACIG00000001296	-	96	57.566	ENSMMOG00000003327	scrt1b	96	57.895	Mola_mola
ENSACIG00000001296	-	96	53.846	ENSMMOG00000018345	-	97	54.167	Mola_mola
ENSACIG00000001296	-	99	63.863	ENSMMOG00000009272	scrt2	99	64.062	Mola_mola
ENSACIG00000001296	-	96	57.047	ENSMALG00000012704	scrt1b	96	57.807	Monopterus_albus
ENSACIG00000001296	-	100	60.129	ENSMALG00000013656	scrt2	100	60.129	Monopterus_albus
ENSACIG00000001296	-	96	52.716	ENSNBRG00000014882	-	97	53.674	Neolamprologus_brichardi
ENSACIG00000001296	-	96	56.667	ENSNBRG00000013983	scrt1b	96	56.333	Neolamprologus_brichardi
ENSACIG00000001296	-	100	61.093	ENSNBRG00000007221	scrt2	100	60.772	Neolamprologus_brichardi
ENSACIG00000001296	-	100	86.850	ENSONIG00000003152	-	100	85.342	Oreochromis_niloticus
ENSACIG00000001296	-	96	53.312	ENSONIG00000019809	-	99	53.994	Oreochromis_niloticus
ENSACIG00000001296	-	100	63.692	ENSONIG00000016758	scrt2	100	62.963	Oreochromis_niloticus
ENSACIG00000001296	-	96	57.000	ENSONIG00000006007	scrt1b	100	57.000	Oreochromis_niloticus
ENSACIG00000001296	-	96	57.556	ENSORLG00000022825	-	97	54.921	Oryzias_latipes
ENSACIG00000001296	-	100	64.308	ENSORLG00000024051	scrt2	100	63.580	Oryzias_latipes
ENSACIG00000001296	-	96	58.054	ENSORLG00000025651	scrt1b	96	58.140	Oryzias_latipes
ENSACIG00000001296	-	100	64.308	ENSORLG00020011478	scrt2	100	63.580	Oryzias_latipes_hni
ENSACIG00000001296	-	96	58.054	ENSORLG00020012967	scrt1b	96	58.140	Oryzias_latipes_hni
ENSACIG00000001296	-	96	58.054	ENSORLG00015019165	scrt1b	96	58.140	Oryzias_latipes_hsok
ENSACIG00000001296	-	100	64.308	ENSORLG00015005524	scrt2	100	63.580	Oryzias_latipes_hsok
ENSACIG00000001296	-	96	57.097	ENSORLG00015010104	-	97	54.603	Oryzias_latipes_hsok
ENSACIG00000001296	-	96	58.054	ENSOMEG00000003925	scrt1b	96	58.140	Oryzias_melastigma
ENSACIG00000001296	-	100	63.077	ENSOMEG00000002661	scrt2	100	62.346	Oryzias_melastigma
ENSACIG00000001296	-	96	57.516	ENSOMEG00000000286	-	97	55.272	Oryzias_melastigma
ENSACIG00000001296	-	96	58.333	ENSPKIG00000022303	SCRT1	96	58.333	Paramormyrops_kingsleyae
ENSACIG00000001296	-	96	59.333	ENSPKIG00000020085	scrt1a	96	59.333	Paramormyrops_kingsleyae
ENSACIG00000001296	-	96	57.383	ENSPMGG00000002260	scrt1b	96	58.054	Periophthalmus_magnuspinnatus
ENSACIG00000001296	-	96	54.633	ENSPMGG00000021402	-	97	55.591	Periophthalmus_magnuspinnatus
ENSACIG00000001296	-	100	61.415	ENSPMGG00000016561	scrt2	100	62.058	Periophthalmus_magnuspinnatus
ENSACIG00000001296	-	96	58.609	ENSPFOG00000017719	scrt1b	96	58.804	Poecilia_formosa
ENSACIG00000001296	-	96	53.994	ENSPFOG00000005616	-	97	54.369	Poecilia_formosa
ENSACIG00000001296	-	100	63.272	ENSPFOG00000007738	scrt2	100	62.963	Poecilia_formosa
ENSACIG00000001296	-	96	58.609	ENSPLAG00000009876	scrt1b	96	58.804	Poecilia_latipinna
ENSACIG00000001296	-	100	62.379	ENSPLAG00000005765	scrt2	100	62.058	Poecilia_latipinna
ENSACIG00000001296	-	96	53.698	ENSPLAG00000011718	-	97	54.369	Poecilia_latipinna
ENSACIG00000001296	-	96	58.609	ENSPMEG00000013274	scrt1b	96	58.804	Poecilia_mexicana
ENSACIG00000001296	-	96	53.698	ENSPMEG00000011706	-	97	54.369	Poecilia_mexicana
ENSACIG00000001296	-	100	62.379	ENSPMEG00000001538	scrt2	100	62.058	Poecilia_mexicana
ENSACIG00000001296	-	96	53.722	ENSPREG00000012166	-	97	54.369	Poecilia_reticulata
ENSACIG00000001296	-	100	63.272	ENSPREG00000001147	scrt2	100	62.963	Poecilia_reticulata
ENSACIG00000001296	-	96	58.609	ENSPREG00000018985	scrt1b	96	58.804	Poecilia_reticulata
ENSACIG00000001296	-	100	61.093	ENSPNYG00000013109	scrt2	100	60.772	Pundamilia_nyererei
ENSACIG00000001296	-	96	57.143	ENSPNYG00000017733	scrt1b	96	57.143	Pundamilia_nyererei
ENSACIG00000001296	-	96	52.716	ENSPNYG00000008865	-	97	53.355	Pundamilia_nyererei
ENSACIG00000001296	-	96	58.333	ENSPNAG00000017415	scrt1a	96	58.333	Pygocentrus_nattereri
ENSACIG00000001296	-	96	58.000	ENSPNAG00000027880	-	97	58.000	Pygocentrus_nattereri
ENSACIG00000001296	-	96	59.333	ENSSFOG00015001195	SCRT1	96	59.333	Scleropages_formosus
ENSACIG00000001296	-	96	53.651	ENSSMAG00000005122	-	97	54.603	Scophthalmus_maximus
ENSACIG00000001296	-	96	57.947	ENSSMAG00000019207	scrt1b	96	58.140	Scophthalmus_maximus
ENSACIG00000001296	-	96	56.811	ENSSDUG00000007752	scrt1b	96	57.143	Seriola_dumerili
ENSACIG00000001296	-	96	53.355	ENSSDUG00000013215	-	97	54.313	Seriola_dumerili
ENSACIG00000001296	-	96	61.146	ENSSDUG00000001637	scrt2	95	60.383	Seriola_dumerili
ENSACIG00000001296	-	96	56.811	ENSSLDG00000017166	scrt1b	96	57.143	Seriola_lalandi_dorsalis
ENSACIG00000001296	-	100	64.000	ENSSLDG00000013565	scrt2	100	63.272	Seriola_lalandi_dorsalis
ENSACIG00000001296	-	96	53.355	ENSSLDG00000016454	-	97	54.313	Seriola_lalandi_dorsalis
ENSACIG00000001296	-	100	53.722	ENSSPUG00000018637	SCRT2	100	54.369	Sphenodon_punctatus
ENSACIG00000001296	-	96	56.811	ENSSPAG00000002200	scrt1b	96	57.143	Stegastes_partitus
ENSACIG00000001296	-	96	54.019	ENSSPAG00000006788	-	97	54.952	Stegastes_partitus
ENSACIG00000001296	-	100	61.415	ENSSPAG00000014018	scrt2	100	61.093	Stegastes_partitus
ENSACIG00000001296	-	66	68.966	ENSTGUG00000006801	SCRT2	88	68.075	Taeniopygia_guttata
ENSACIG00000001296	-	96	54.574	ENSTRUG00000012719	-	97	55.238	Takifugu_rubripes
ENSACIG00000001296	-	99	61.994	ENSTRUG00000007620	scrt2	99	61.250	Takifugu_rubripes
ENSACIG00000001296	-	96	57.000	ENSTRUG00000011637	scrt1b	97	57.000	Takifugu_rubripes
ENSACIG00000001296	-	79	59.533	ENSTRUG00000019558	-	78	63.071	Takifugu_rubripes
ENSACIG00000001296	-	96	56.667	ENSTNIG00000018384	scrt1b	96	56.667	Tetraodon_nigroviridis
ENSACIG00000001296	-	99	64.174	ENSTNIG00000012473	scrt2	100	63.548	Tetraodon_nigroviridis
ENSACIG00000001296	-	96	53.642	ENSXCOG00000019861	-	96	54.305	Xiphophorus_couchianus
ENSACIG00000001296	-	96	57.285	ENSXCOG00000019675	scrt1b	96	57.475	Xiphophorus_couchianus
ENSACIG00000001296	-	100	60.185	ENSXCOG00000014367	scrt2	100	59.877	Xiphophorus_couchianus
ENSACIG00000001296	-	96	57.285	ENSXMAG00000027885	scrt1b	96	57.475	Xiphophorus_maculatus
ENSACIG00000001296	-	100	63.272	ENSXMAG00000028567	scrt2	100	62.963	Xiphophorus_maculatus
ENSACIG00000001296	-	96	53.698	ENSXMAG00000015353	-	97	54.369	Xiphophorus_maculatus