EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000001333 (Gene tree)
Gene ID: -
Gene Symbol: tra2a
Alias: zgc:64175
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 4354 bases
Position: chrCCOE01000707.1:1038505-1042858
Accession: ZDB-GENE-040426-1391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000001672	RRM_1	PF00076.22	1.4e-19	1	1
ENSACIP00000001659	RRM_1	PF00076.22	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000001741	-	555	-	ENSACIP00000001672	184 (aa)	-	-
ENSACIT00000001728	-	837	-	ENSACIP00000001659	279 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000001333	tra2a	52	30.612	ENSACIG00000012502	-	83	30.612
ENSACIG00000001333	tra2a	58	83.019	ENSACIG00000001289	TRA2B	56	76.510
ENSACIG00000001333	tra2a	52	35.227	ENSACIG00000021815	-	77	35.897
ENSACIG00000001333	tra2a	61	85.841	ENSACIG00000016739	-	90	75.472
ENSACIG00000001333	tra2a	59	30.928	ENSACIG00000018226	elavl1a	82	40.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001333	tra2a	79	87.500	ENSG00000164548	TRA2A	84	86.842	Homo_sapiens
ENSACIG00000001333	tra2a	97	97.191	ENSAPOG00000017425	tra2a	88	97.191	Acanthochromis_polyacanthus
ENSACIG00000001333	tra2a	79	88.079	ENSAMEG00000003501	TRA2A	51	76.630	Ailuropoda_melanoleuca
ENSACIG00000001333	tra2a	95	88.083	ENSAOCG00000015445	tra2a	86	83.858	Amphiprion_ocellaris
ENSACIG00000001333	tra2a	97	97.753	ENSAPEG00000018557	tra2a	93	97.753	Amphiprion_percula
ENSACIG00000001333	tra2a	98	87.624	ENSATEG00000000671	tra2a	86	80.695	Anabas_testudineus
ENSACIG00000001333	tra2a	79	89.116	ENSAPLG00000013689	TRA2A	55	89.116	Anas_platyrhynchos
ENSACIG00000001333	tra2a	79	87.500	ENSACAG00000013502	TRA2A	54	87.500	Anolis_carolinensis
ENSACIG00000001333	tra2a	73	86.525	ENSANAG00000035184	TRA2A	83	71.053	Aotus_nancymaae
ENSACIG00000001333	tra2a	100	95.070	ENSACLG00000024845	tra2a	95	95.070	Astatotilapia_calliptera
ENSACIG00000001333	tra2a	81	86.709	ENSAMXG00000005553	tra2a	94	82.063	Astyanax_mexicanus
ENSACIG00000001333	tra2a	79	88.079	ENSBTAG00000012622	TRA2A	54	88.079	Bos_taurus
ENSACIG00000001333	tra2a	86	86.503	ENSCJAG00000045802	-	57	86.093	Callithrix_jacchus
ENSACIG00000001333	tra2a	79	87.500	ENSCJAG00000001509	-	54	87.500	Callithrix_jacchus
ENSACIG00000001333	tra2a	79	88.079	ENSCAFG00000002788	TRA2A	54	88.079	Canis_familiaris
ENSACIG00000001333	tra2a	79	88.079	ENSCAFG00020002745	TRA2A	57	88.079	Canis_lupus_dingo
ENSACIG00000001333	tra2a	79	87.500	ENSTSYG00000000388	TRA2A	84	86.842	Carlito_syrichta
ENSACIG00000001333	tra2a	90	63.846	ENSCAPG00000017377	TRA2A	52	67.105	Cavia_aperea
ENSACIG00000001333	tra2a	79	87.500	ENSCPOG00000010739	TRA2A	54	87.500	Cavia_porcellus
ENSACIG00000001333	tra2a	79	87.500	ENSCCAG00000019576	TRA2A	84	86.842	Cebus_capucinus
ENSACIG00000001333	tra2a	79	87.500	ENSCATG00000041219	TRA2A	84	86.842	Cercocebus_atys
ENSACIG00000001333	tra2a	79	87.500	ENSCLAG00000007917	TRA2A	54	87.500	Chinchilla_lanigera
ENSACIG00000001333	tra2a	79	87.500	ENSCSAG00000014051	TRA2A	54	87.500	Chlorocebus_sabaeus
ENSACIG00000001333	tra2a	79	87.500	ENSCHOG00000001130	TRA2A	54	87.500	Choloepus_hoffmanni
ENSACIG00000001333	tra2a	79	88.667	ENSCPBG00000022466	TRA2A	53	88.667	Chrysemys_picta_bellii
ENSACIG00000001333	tra2a	79	87.500	ENSCANG00000031292	TRA2A	84	86.842	Colobus_angolensis_palliatus
ENSACIG00000001333	tra2a	79	86.364	ENSCGRG00001019980	Tra2a	55	86.364	Cricetulus_griseus_chok1gshd
ENSACIG00000001333	tra2a	79	86.364	ENSCGRG00000006087	Tra2a	57	86.364	Cricetulus_griseus_crigri
ENSACIG00000001333	tra2a	90	77.308	ENSCSEG00000012193	tra2a	98	72.685	Cynoglossus_semilaevis
ENSACIG00000001333	tra2a	78	79.518	ENSDARG00000007863	tra2a	72	80.405	Danio_rerio
ENSACIG00000001333	tra2a	79	87.500	ENSDNOG00000039446	TRA2A	54	87.500	Dasypus_novemcinctus
ENSACIG00000001333	tra2a	79	87.500	ENSDORG00000009361	Tra2a	54	87.500	Dipodomys_ordii
ENSACIG00000001333	tra2a	79	85.806	ENSETEG00000007250	TRA2A	54	85.806	Echinops_telfairi
ENSACIG00000001333	tra2a	79	88.079	ENSEASG00005022002	TRA2A	54	88.079	Equus_asinus_asinus
ENSACIG00000001333	tra2a	79	88.079	ENSECAG00000011508	TRA2A	54	88.079	Equus_caballus
ENSACIG00000001333	tra2a	79	86.184	ENSEEUG00000015674	TRA2A	54	86.184	Erinaceus_europaeus
ENSACIG00000001333	tra2a	78	80.000	ENSELUG00000005846	tra2a	87	65.965	Esox_lucius
ENSACIG00000001333	tra2a	79	88.079	ENSFCAG00000005361	TRA2A	54	88.079	Felis_catus
ENSACIG00000001333	tra2a	79	89.116	ENSFALG00000009605	TRA2A	55	89.116	Ficedula_albicollis
ENSACIG00000001333	tra2a	79	86.928	ENSFDAG00000004949	TRA2A	54	86.928	Fukomys_damarensis
ENSACIG00000001333	tra2a	90	66.541	ENSGMOG00000013740	tra2a	87	71.429	Gadus_morhua
ENSACIG00000001333	tra2a	79	89.116	ENSGALG00000010973	TRA2A	52	89.116	Gallus_gallus
ENSACIG00000001333	tra2a	91	76.265	ENSGACG00000006878	tra2a	86	78.988	Gasterosteus_aculeatus
ENSACIG00000001333	tra2a	79	89.865	ENSGAGG00000005793	TRA2A	53	89.865	Gopherus_agassizii
ENSACIG00000001333	tra2a	79	87.500	ENSGGOG00000009053	TRA2A	84	86.842	Gorilla_gorilla
ENSACIG00000001333	tra2a	100	95.070	ENSHBUG00000018234	tra2a	95	95.070	Haplochromis_burtoni
ENSACIG00000001333	tra2a	79	87.500	ENSHGLG00000012168	TRA2A	54	87.500	Heterocephalus_glaber_female
ENSACIG00000001333	tra2a	79	87.500	ENSHGLG00100014577	TRA2A	54	87.500	Heterocephalus_glaber_male
ENSACIG00000001333	tra2a	96	65.625	ENSHCOG00000006314	tra2a	64	69.718	Hippocampus_comes
ENSACIG00000001333	tra2a	60	80.000	ENSHCOG00000018058	-	99	78.571	Hippocampus_comes
ENSACIG00000001333	tra2a	66	69.565	ENSHCOG00000006320	tra2a	52	71.296	Hippocampus_comes
ENSACIG00000001333	tra2a	79	87.500	ENSSTOG00000012073	TRA2A	54	87.500	Ictidomys_tridecemlineatus
ENSACIG00000001333	tra2a	79	87.500	ENSJJAG00000022787	Tra2a	56	87.500	Jaculus_jaculus
ENSACIG00000001333	tra2a	91	74.525	ENSLBEG00000005297	tra2a	88	74.905	Labrus_bergylta
ENSACIG00000001333	tra2a	79	85.526	ENSLACG00000014765	TRA2A	60	82.022	Latimeria_chalumnae
ENSACIG00000001333	tra2a	61	85.841	ENSLOCG00000009558	-	53	75.949	Lepisosteus_oculatus
ENSACIG00000001333	tra2a	90	81.641	ENSLOCG00000011615	-	85	75.781	Lepisosteus_oculatus
ENSACIG00000001333	tra2a	79	86.928	ENSLAFG00000006598	TRA2A	54	86.928	Loxodonta_africana
ENSACIG00000001333	tra2a	79	87.500	ENSMFAG00000043211	TRA2A	84	86.842	Macaca_fascicularis
ENSACIG00000001333	tra2a	79	87.500	ENSMMUG00000006286	TRA2A	82	85.816	Macaca_mulatta
ENSACIG00000001333	tra2a	79	87.500	ENSMNEG00000040670	TRA2A	84	86.842	Macaca_nemestrina
ENSACIG00000001333	tra2a	79	87.500	ENSMLEG00000032154	TRA2A	84	86.842	Mandrillus_leucophaeus
ENSACIG00000001333	tra2a	79	82.432	ENSMAMG00000008575	tra2a	86	86.036	Mastacembelus_armatus
ENSACIG00000001333	tra2a	100	95.070	ENSMZEG00005009142	tra2a	95	95.070	Maylandia_zebra
ENSACIG00000001333	tra2a	79	89.116	ENSMGAG00000010514	TRA2A	55	89.116	Meleagris_gallopavo
ENSACIG00000001333	tra2a	94	79.310	ENSMICG00000036849	-	57	78.231	Microcebus_murinus
ENSACIG00000001333	tra2a	79	87.500	ENSMICG00000043639	-	84	86.842	Microcebus_murinus
ENSACIG00000001333	tra2a	54	89.109	ENSMOCG00000006467	-	53	89.109	Microtus_ochrogaster
ENSACIG00000001333	tra2a	85	86.076	ENSMOCG00000010249	-	57	85.714	Microtus_ochrogaster
ENSACIG00000001333	tra2a	97	94.413	ENSMMOG00000020174	tra2a	63	94.413	Mola_mola
ENSACIG00000001333	tra2a	79	87.500	ENSMODG00000000807	TRA2A	54	87.500	Monodelphis_domestica
ENSACIG00000001333	tra2a	86	83.600	ENSMALG00000020875	tra2a	86	77.186	Monopterus_albus
ENSACIG00000001333	tra2a	79	86.364	ENSMUSG00000029817	Tra2a	55	86.364	Mus_musculus
ENSACIG00000001333	tra2a	79	86.364	MGP_PahariEiJ_G0022115	Tra2a	55	86.364	Mus_pahari
ENSACIG00000001333	tra2a	79	86.364	MGP_SPRETEiJ_G0029368	Tra2a	55	86.364	Mus_spretus
ENSACIG00000001333	tra2a	79	88.079	ENSMPUG00000013480	TRA2A	54	88.079	Mustela_putorius_furo
ENSACIG00000001333	tra2a	79	85.621	ENSMLUG00000013972	TRA2A	54	85.621	Myotis_lucifugus
ENSACIG00000001333	tra2a	79	86.842	ENSNGAG00000023805	Tra2a	54	86.842	Nannospalax_galili
ENSACIG00000001333	tra2a	99	95.238	ENSNBRG00000005992	tra2a	91	95.238	Neolamprologus_brichardi
ENSACIG00000001333	tra2a	79	87.500	ENSNLEG00000014794	TRA2A	84	86.842	Nomascus_leucogenys
ENSACIG00000001333	tra2a	95	63.687	ENSNLEG00000029659	-	88	67.550	Nomascus_leucogenys
ENSACIG00000001333	tra2a	79	86.928	ENSMEUG00000001202	TRA2A	85	70.769	Notamacropus_eugenii
ENSACIG00000001333	tra2a	79	86.842	ENSOPRG00000007606	TRA2A	54	86.842	Ochotona_princeps
ENSACIG00000001333	tra2a	79	87.500	ENSODEG00000008335	TRA2A	54	87.500	Octodon_degus
ENSACIG00000001333	tra2a	100	93.728	ENSONIG00000004503	tra2a	95	93.728	Oreochromis_niloticus
ENSACIG00000001333	tra2a	90	73.684	ENSOANG00000014202	TRA2A	55	82.278	Ornithorhynchus_anatinus
ENSACIG00000001333	tra2a	79	87.500	ENSOCUG00000024139	TRA2A	54	87.500	Oryctolagus_cuniculus
ENSACIG00000001333	tra2a	79	79.866	ENSORLG00000022191	tra2a	56	79.866	Oryzias_latipes
ENSACIG00000001333	tra2a	79	79.866	ENSORLG00020003490	tra2a	55	79.195	Oryzias_latipes_hni
ENSACIG00000001333	tra2a	79	79.195	ENSORLG00015015485	tra2a	55	78.523	Oryzias_latipes_hsok
ENSACIG00000001333	tra2a	79	78.767	ENSOMEG00000017864	tra2a	54	78.767	Oryzias_melastigma
ENSACIG00000001333	tra2a	79	87.500	ENSOGAG00000009733	TRA2A	54	87.500	Otolemur_garnettii
ENSACIG00000001333	tra2a	79	85.806	ENSOARG00000002323	-	59	85.806	Ovis_aries
ENSACIG00000001333	tra2a	79	88.079	ENSOARG00000013147	TRA2A	54	88.079	Ovis_aries
ENSACIG00000001333	tra2a	79	87.500	ENSPPAG00000034382	TRA2A	84	86.842	Pan_paniscus
ENSACIG00000001333	tra2a	79	88.079	ENSPPRG00000015216	TRA2A	54	88.079	Panthera_pardus
ENSACIG00000001333	tra2a	79	88.079	ENSPTIG00000021114	TRA2A	54	88.079	Panthera_tigris_altaica
ENSACIG00000001333	tra2a	79	87.500	ENSPTRG00000046098	-	54	87.500	Pan_troglodytes
ENSACIG00000001333	tra2a	81	87.742	ENSPTRG00000018988	TRA2A	84	86.842	Pan_troglodytes
ENSACIG00000001333	tra2a	79	87.500	ENSPANG00000014541	TRA2A	54	87.500	Papio_anubis
ENSACIG00000001333	tra2a	90	79.608	ENSPKIG00000012298	tra2a	85	73.333	Paramormyrops_kingsleyae
ENSACIG00000001333	tra2a	79	87.500	ENSPSIG00000014993	TRA2A	55	87.500	Pelodiscus_sinensis
ENSACIG00000001333	tra2a	79	86.928	ENSPEMG00000008564	-	54	86.928	Peromyscus_maniculatus_bairdii
ENSACIG00000001333	tra2a	85	72.785	ENSPMAG00000007947	tra2a	53	73.944	Petromyzon_marinus
ENSACIG00000001333	tra2a	79	88.158	ENSPCIG00000007917	TRA2A	85	70.000	Phascolarctos_cinereus
ENSACIG00000001333	tra2a	79	87.500	ENSPPYG00000017728	TRA2A	54	87.500	Pongo_abelii
ENSACIG00000001333	tra2a	79	86.928	ENSPCAG00000004148	TRA2A	55	86.928	Procavia_capensis
ENSACIG00000001333	tra2a	90	60.630	ENSPCOG00000020465	TRA2A	52	56.983	Propithecus_coquereli
ENSACIG00000001333	tra2a	79	86.275	ENSPVAG00000011298	TRA2A	54	86.275	Pteropus_vampyrus
ENSACIG00000001333	tra2a	100	96.085	ENSPNYG00000020134	tra2a	100	96.085	Pundamilia_nyererei
ENSACIG00000001333	tra2a	79	82.317	ENSPNAG00000000482	tra2a	61	84.530	Pygocentrus_nattereri
ENSACIG00000001333	tra2a	79	86.364	ENSRNOG00000009156	Tra2a	55	86.364	Rattus_norvegicus
ENSACIG00000001333	tra2a	61	95.536	ENSRBIG00000036805	TRA2A	58	95.536	Rhinopithecus_bieti
ENSACIG00000001333	tra2a	79	87.500	ENSRROG00000030758	TRA2A	84	86.842	Rhinopithecus_roxellana
ENSACIG00000001333	tra2a	79	87.500	ENSSBOG00000031562	TRA2A	84	86.842	Saimiri_boliviensis_boliviensis
ENSACIG00000001333	tra2a	79	88.158	ENSSHAG00000005727	TRA2A	54	88.158	Sarcophilus_harrisii
ENSACIG00000001333	tra2a	79	90.411	ENSSFOG00015014004	tra2a	60	83.978	Scleropages_formosus
ENSACIG00000001333	tra2a	94	86.415	ENSSMAG00000014242	tra2a	88	79.528	Scophthalmus_maximus
ENSACIG00000001333	tra2a	100	93.793	ENSSDUG00000005610	tra2a	95	93.793	Seriola_dumerili
ENSACIG00000001333	tra2a	97	96.154	ENSSLDG00000025577	tra2a	98	96.154	Seriola_lalandi_dorsalis
ENSACIG00000001333	tra2a	79	85.806	ENSSPUG00000006143	TRA2A	54	85.806	Sphenodon_punctatus
ENSACIG00000001333	tra2a	100	94.406	ENSSPAG00000004184	tra2a	95	94.406	Stegastes_partitus
ENSACIG00000001333	tra2a	79	88.079	ENSSSCG00000015387	TRA2A	54	88.079	Sus_scrofa
ENSACIG00000001333	tra2a	82	87.417	ENSTGUG00000002795	TRA2A	56	85.714	Taeniopygia_guttata
ENSACIG00000001333	tra2a	79	87.417	ENSTTRG00000008922	TRA2A	54	87.417	Tursiops_truncatus
ENSACIG00000001333	tra2a	79	86.928	ENSUMAG00000001181	TRA2A	79	86.275	Ursus_maritimus
ENSACIG00000001333	tra2a	79	88.079	ENSVVUG00000001045	TRA2A	54	88.079	Vulpes_vulpes
ENSACIG00000001333	tra2a	79	84.967	ENSXETG00000007397	tra2a	54	82.895	Xenopus_tropicalis