EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000001335 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 1801 bases
Position: chrCCOE01000190.1:1859056-1860856
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000001602	RRM_1	PF00076.22	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000001670	-	360	-	ENSACIP00000001602	119 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000001335	-	52	35.484	ENSACIG00000020091	-	59	35.484
ENSACIG00000001335	-	53	36.508	ENSACIG00000018649	srsf4	52	36.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001335	-	67	87.500	ENSG00000184672	RALYL	93	88.608	Homo_sapiens
ENSACIG00000001335	-	67	96.250	ENSAPOG00000005050	RALYL	78	96.250	Acanthochromis_polyacanthus
ENSACIG00000001335	-	62	78.378	ENSAPOG00000020641	-	87	78.378	Acanthochromis_polyacanthus
ENSACIG00000001335	-	73	94.382	ENSAPEG00000010582	-	80	97.561	Amphiprion_percula
ENSACIG00000001335	-	66	89.744	ENSAPEG00000021452	-	75	89.744	Amphiprion_percula
ENSACIG00000001335	-	70	86.747	ENSCCAG00000025003	RALYL	81	86.747	Cebus_capucinus
ENSACIG00000001335	-	74	87.500	ENSCSEG00000019406	-	78	91.358	Cynoglossus_semilaevis
ENSACIG00000001335	-	81	73.958	ENSFHEG00000000223	-	89	80.460	Fundulus_heteroclitus
ENSACIG00000001335	-	69	96.341	ENSFHEG00000017466	-	58	96.341	Fundulus_heteroclitus
ENSACIG00000001335	-	87	70.874	ENSGAFG00000020052	-	80	85.366	Gambusia_affinis
ENSACIG00000001335	-	68	97.531	ENSGAFG00000018541	RALYL	79	97.531	Gambusia_affinis
ENSACIG00000001335	-	74	80.682	ENSHCOG00000002851	-	75	85.366	Hippocampus_comes
ENSACIG00000001335	-	71	92.941	ENSHCOG00000012719	-	83	92.941	Hippocampus_comes
ENSACIG00000001335	-	67	91.250	ENSLACG00000000135	-	89	92.405	Latimeria_chalumnae
ENSACIG00000001335	-	67	81.250	ENSMMUG00000003920	-	82	81.250	Macaca_mulatta
ENSACIG00000001335	-	68	97.531	ENSMAMG00000011137	RALYL	84	97.531	Mastacembelus_armatus
ENSACIG00000001335	-	73	83.908	ENSMICG00000005558	RALYL	83	89.024	Microcebus_murinus
ENSACIG00000001335	-	75	92.135	ENSMMOG00000004599	-	82	92.135	Mola_mola
ENSACIG00000001335	-	74	84.091	ENSMODG00000029239	-	79	90.123	Monodelphis_domestica
ENSACIG00000001335	-	67	86.250	ENSMUSG00000039717	Ralyl	93	87.342	Mus_musculus
ENSACIG00000001335	-	76	84.615	ENSOANG00000030197	-	54	90.123	Ornithorhynchus_anatinus
ENSACIG00000001335	-	67	93.750	ENSPKIG00000023807	RALYL	81	94.937	Paramormyrops_kingsleyae
ENSACIG00000001335	-	74	84.091	ENSPCIG00000023938	-	70	90.123	Phascolarctos_cinereus
ENSACIG00000001335	-	68	87.654	ENSRROG00000023925	RALYL	82	87.654	Rhinopithecus_roxellana
ENSACIG00000001335	-	68	81.481	ENSSFOG00015012924	-	82	81.481	Scleropages_formosus
ENSACIG00000001335	-	68	79.012	ENSSLDG00000008069	-	77	79.012	Seriola_lalandi_dorsalis
ENSACIG00000001335	-	74	93.182	ENSSPAG00000014679	-	86	98.780	Stegastes_partitus
ENSACIG00000001335	-	71	95.238	ENSTRUG00000021320	RALYL	91	95.238	Takifugu_rubripes
ENSACIG00000001335	-	72	73.256	ENSTRUG00000002153	-	65	73.256	Takifugu_rubripes
ENSACIG00000001335	-	74	76.136	ENSUAMG00000006020	-	85	80.488	Ursus_americanus
ENSACIG00000001335	-	71	82.143	ENSXCOG00000016096	-	71	84.146	Xiphophorus_couchianus