EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000001362 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 7497 bases
Position: chrCCOE01000439.1:5053877-5061373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000001704	RNase_Zc3h12a	PF11977.8	1.7e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000001776	-	2469	-	ENSACIP00000001704	822 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001362's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001362's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000001362	-	97	47.250	ENSACIG00000005689	-	78	78.367
ENSACIG00000001362	-	85	48.182	ENSACIG00000009787	zc3h12b	51	65.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001362	-	83	79.710	ENSAPOG00000015355	-	82	79.974	Acanthochromis_polyacanthus
ENSACIG00000001362	-	82	50.206	ENSAPOG00000001632	-	86	68.617	Acanthochromis_polyacanthus
ENSACIG00000001362	-	98	81.250	ENSAOCG00000003866	-	90	92.531	Amphiprion_ocellaris
ENSACIG00000001362	-	98	82.708	ENSAPEG00000005727	-	96	85.806	Amphiprion_percula
ENSACIG00000001362	-	69	84.925	ENSAPEG00000018582	-	100	85.260	Amphiprion_percula
ENSACIG00000001362	-	97	46.783	ENSATEG00000002260	-	83	81.974	Anabas_testudineus
ENSACIG00000001362	-	97	72.400	ENSATEG00000004134	-	100	71.473	Anabas_testudineus
ENSACIG00000001362	-	97	75.670	ENSACLG00000027924	-	100	74.250	Astatotilapia_calliptera
ENSACIG00000001362	-	79	56.557	ENSACLG00000018493	-	76	64.583	Astatotilapia_calliptera
ENSACIG00000001362	-	80	54.834	ENSCSEG00000008542	-	72	56.250	Cynoglossus_semilaevis
ENSACIG00000001362	-	92	72.664	ENSCSEG00000010073	-	87	87.097	Cynoglossus_semilaevis
ENSACIG00000001362	-	97	69.497	ENSCVAG00000002328	-	100	67.610	Cyprinodon_variegatus
ENSACIG00000001362	-	78	62.295	ENSELUG00000005470	-	78	68.627	Esox_lucius
ENSACIG00000001362	-	83	57.874	ENSELUG00000009319	-	98	56.527	Esox_lucius
ENSACIG00000001362	-	97	73.165	ENSFHEG00000021225	-	100	72.684	Fundulus_heteroclitus
ENSACIG00000001362	-	70	50.408	ENSGMOG00000017975	-	100	50.490	Gadus_morhua
ENSACIG00000001362	-	97	68.182	ENSGAFG00000005290	-	100	66.066	Gambusia_affinis
ENSACIG00000001362	-	70	75.164	ENSGACG00000014201	-	100	75.822	Gasterosteus_aculeatus
ENSACIG00000001362	-	63	53.196	ENSGAGG00000003881	ZC3H12A	64	59.341	Gopherus_agassizii
ENSACIG00000001362	-	97	75.567	ENSHBUG00000006831	-	100	74.147	Haplochromis_burtoni
ENSACIG00000001362	-	97	64.094	ENSHCOG00000008878	-	100	63.392	Hippocampus_comes
ENSACIG00000001362	-	52	49.774	ENSIPUG00000011663	-	53	60.870	Ictalurus_punctatus
ENSACIG00000001362	-	97	69.556	ENSKMAG00000011694	-	93	75.032	Kryptolebias_marmoratus
ENSACIG00000001362	-	94	69.570	ENSLBEG00000012554	-	92	81.646	Labrus_bergylta
ENSACIG00000001362	-	78	61.667	ENSLBEG00000012710	-	79	62.712	Labrus_bergylta
ENSACIG00000001362	-	97	68.275	ENSLBEG00000003547	-	94	74.814	Labrus_bergylta
ENSACIG00000001362	-	97	79.645	ENSMAMG00000021794	-	94	92.810	Mastacembelus_armatus
ENSACIG00000001362	-	97	44.874	ENSMAMG00000020372	-	88	55.932	Mastacembelus_armatus
ENSACIG00000001362	-	76	64.583	ENSMZEG00005019137	-	90	69.677	Maylandia_zebra
ENSACIG00000001362	-	97	75.670	ENSMZEG00005007718	-	100	74.250	Maylandia_zebra
ENSACIG00000001362	-	56	64.669	ENSMGAG00000003371	ZC3H12A	75	64.669	Meleagris_gallopavo
ENSACIG00000001362	-	91	76.514	ENSMMOG00000005728	-	88	91.333	Mola_mola
ENSACIG00000001362	-	87	53.673	ENSMMOG00000019526	-	77	53.333	Mola_mola
ENSACIG00000001362	-	97	70.570	ENSMALG00000010501	-	100	69.637	Monopterus_albus
ENSACIG00000001362	-	60	53.704	MGP_CAROLIEiJ_G0026462	Zc3h12a	61	64.890	Mus_caroli
ENSACIG00000001362	-	76	64.583	ENSNBRG00000012175	-	90	70.323	Neolamprologus_brichardi
ENSACIG00000001362	-	97	75.464	ENSNBRG00000006978	-	100	74.457	Neolamprologus_brichardi
ENSACIG00000001362	-	97	75.901	ENSONIG00000012268	-	100	85.257	Oreochromis_niloticus
ENSACIG00000001362	-	97	68.267	ENSORLG00000029243	-	100	67.213	Oryzias_latipes
ENSACIG00000001362	-	97	67.666	ENSORLG00020017005	-	100	65.488	Oryzias_latipes_hni
ENSACIG00000001362	-	97	66.951	ENSORLG00015015211	-	100	65.208	Oryzias_latipes_hsok
ENSACIG00000001362	-	97	67.338	ENSOMEG00000006666	-	100	65.856	Oryzias_melastigma
ENSACIG00000001362	-	53	58.268	ENSPSIG00000009198	ZC3H12A	72	61.254	Pelodiscus_sinensis
ENSACIG00000001362	-	57	81.000	ENSPMGG00000009790	-	62	81.333	Periophthalmus_magnuspinnatus
ENSACIG00000001362	-	58	59.751	ENSPMGG00000020126	-	50	59.236	Periophthalmus_magnuspinnatus
ENSACIG00000001362	-	97	69.198	ENSPLAG00000009867	-	100	67.513	Poecilia_latipinna
ENSACIG00000001362	-	79	52.903	ENSPMEG00000011676	-	58	63.676	Poecilia_mexicana
ENSACIG00000001362	-	97	69.853	ENSPMEG00000006624	-	100	68.177	Poecilia_mexicana
ENSACIG00000001362	-	97	69.588	ENSPREG00000010838	-	100	67.797	Poecilia_reticulata
ENSACIG00000001362	-	95	43.261	ENSPREG00000001607	-	82	73.846	Poecilia_reticulata
ENSACIG00000001362	-	82	50.248	ENSSMAG00000007258	-	91	56.667	Scophthalmus_maximus
ENSACIG00000001362	-	97	72.708	ENSSMAG00000007545	-	100	70.938	Scophthalmus_maximus
ENSACIG00000001362	-	97	73.873	ENSSDUG00000021864	-	100	72.643	Seriola_dumerili
ENSACIG00000001362	-	97	48.291	ENSSDUG00000013237	-	90	66.887	Seriola_dumerili
ENSACIG00000001362	-	83	59.677	ENSSLDG00000004886	-	95	52.632	Seriola_lalandi_dorsalis
ENSACIG00000001362	-	97	73.566	ENSSLDG00000012268	-	100	72.541	Seriola_lalandi_dorsalis
ENSACIG00000001362	-	97	74.488	ENSSPAG00000009485	-	100	74.101	Stegastes_partitus
ENSACIG00000001362	-	83	58.065	ENSSPAG00000001850	-	73	59.016	Stegastes_partitus
ENSACIG00000001362	-	97	68.796	ENSTRUG00000022519	-	99	68.063	Takifugu_rubripes
ENSACIG00000001362	-	71	76.613	ENSTNIG00000014519	-	100	87.121	Tetraodon_nigroviridis
ENSACIG00000001362	-	79	54.383	ENSXMAG00000014715	-	94	74.231	Xiphophorus_maculatus
ENSACIG00000001362	-	97	69.085	ENSXMAG00000027171	-	100	67.616	Xiphophorus_maculatus