EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000001500 (Gene tree)
Gene ID: -
Gene Symbol: smarcal1
Alias: im:7145331|si:ch211-239d11.1
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a-like 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 10471 bases
Position: chrCCOE01001704.1:1691346-1701816
Accession: ZDB-GENE-041210-303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000001880	ResIII	PF04851.15	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000001956	-	2346	-	ENSACIP00000001880	781 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001500	smarcal1	91	58.989	ENSG00000138375	SMARCAL1	99	65.839	Homo_sapiens
ENSACIG00000001500	smarcal1	97	87.413	ENSAPOG00000020156	SMARCAL1	87	87.413	Acanthochromis_polyacanthus
ENSACIG00000001500	smarcal1	97	83.400	ENSAOCG00000014266	SMARCAL1	94	86.713	Amphiprion_ocellaris
ENSACIG00000001500	smarcal1	97	83.802	ENSAPEG00000015861	SMARCAL1	93	88.412	Amphiprion_percula
ENSACIG00000001500	smarcal1	97	85.577	ENSATEG00000020624	SMARCAL1	93	85.577	Anabas_testudineus
ENSACIG00000001500	smarcal1	89	63.649	ENSAPLG00000009864	SMARCAL1	71	63.649	Anas_platyrhynchos
ENSACIG00000001500	smarcal1	85	66.267	ENSACAG00000004612	SMARCAL1	68	66.267	Anolis_carolinensis
ENSACIG00000001500	smarcal1	96	93.704	ENSACLG00000015990	SMARCAL1	93	93.372	Astatotilapia_calliptera
ENSACIG00000001500	smarcal1	97	69.146	ENSAMXG00000003350	smarcal1	93	69.146	Astyanax_mexicanus
ENSACIG00000001500	smarcal1	93	63.907	ENSCPBG00000013599	SMARCAL1	75	62.195	Chrysemys_picta_bellii
ENSACIG00000001500	smarcal1	92	49.062	ENSCING00000009308	-	100	49.062	Ciona_intestinalis
ENSACIG00000001500	smarcal1	97	81.466	ENSCSEG00000010785	SMARCAL1	95	81.466	Cynoglossus_semilaevis
ENSACIG00000001500	smarcal1	97	75.976	ENSCVAG00000018780	SMARCAL1	93	75.976	Cyprinodon_variegatus
ENSACIG00000001500	smarcal1	80	56.788	ENSEBUG00000011906	SMARCAL1	99	56.788	Eptatretus_burgeri
ENSACIG00000001500	smarcal1	84	77.964	ENSELUG00000010440	-	72	71.754	Esox_lucius
ENSACIG00000001500	smarcal1	89	63.989	ENSFALG00000003981	SMARCAL1	71	63.989	Ficedula_albicollis
ENSACIG00000001500	smarcal1	97	82.421	ENSFHEG00000008380	SMARCAL1	93	82.421	Fundulus_heteroclitus
ENSACIG00000001500	smarcal1	76	74.941	ENSGMOG00000010034	smarcal1	100	74.941	Gadus_morhua
ENSACIG00000001500	smarcal1	87	64.602	ENSGALG00000011475	RPL37A	70	64.602	Gallus_gallus
ENSACIG00000001500	smarcal1	90	84.112	ENSGACG00000006073	SMARCAL1	100	85.847	Gasterosteus_aculeatus
ENSACIG00000001500	smarcal1	85	68.230	ENSGAGG00000015660	SMARCAL1	71	68.230	Gopherus_agassizii
ENSACIG00000001500	smarcal1	97	93.372	ENSHBUG00000002973	smarcal1	93	93.372	Haplochromis_burtoni
ENSACIG00000001500	smarcal1	97	72.896	ENSHCOG00000017921	smarcal1	95	72.896	Hippocampus_comes
ENSACIG00000001500	smarcal1	97	73.646	ENSKMAG00000012023	SMARCAL1	96	73.646	Kryptolebias_marmoratus
ENSACIG00000001500	smarcal1	94	86.009	ENSLBEG00000003493	smarcal1	87	86.009	Labrus_bergylta
ENSACIG00000001500	smarcal1	97	81.389	ENSLBEG00000022915	smarcal1	99	81.389	Labrus_bergylta
ENSACIG00000001500	smarcal1	89	60.976	ENSLACG00000010974	SMARCAL1	71	60.976	Latimeria_chalumnae
ENSACIG00000001500	smarcal1	97	73.257	ENSLOCG00000009637	smarcal1	93	73.257	Lepisosteus_oculatus
ENSACIG00000001500	smarcal1	97	87.822	ENSMAMG00000000828	SMARCAL1	95	87.822	Mastacembelus_armatus
ENSACIG00000001500	smarcal1	96	93.558	ENSMZEG00005007660	SMARCAL1	93	93.228	Maylandia_zebra
ENSACIG00000001500	smarcal1	91	62.794	ENSMGAG00000011658	SMARCAL1	77	62.794	Meleagris_gallopavo
ENSACIG00000001500	smarcal1	97	78.729	ENSMMOG00000003842	smarcal1	95	78.729	Mola_mola
ENSACIG00000001500	smarcal1	89	61.254	ENSMODG00000015544	SMARCAL1	72	61.254	Monodelphis_domestica
ENSACIG00000001500	smarcal1	99	91.731	ENSNBRG00000016273	smarcal1	100	91.731	Neolamprologus_brichardi
ENSACIG00000001500	smarcal1	90	65.204	ENSMEUG00000004395	SMARCAL1	74	64.462	Notamacropus_eugenii
ENSACIG00000001500	smarcal1	97	87.752	ENSONIG00000009036	smarcal1	95	92.154	Oreochromis_niloticus
ENSACIG00000001500	smarcal1	97	73.939	ENSORLG00000016455	SMARCAL1	92	73.939	Oryzias_latipes
ENSACIG00000001500	smarcal1	97	73.406	ENSORLG00020001610	SMARCAL1	92	73.406	Oryzias_latipes_hni
ENSACIG00000001500	smarcal1	97	73.697	ENSORLG00015001865	SMARCAL1	92	73.697	Oryzias_latipes_hsok
ENSACIG00000001500	smarcal1	97	77.972	ENSOMEG00000001845	smarcal1	92	77.972	Oryzias_melastigma
ENSACIG00000001500	smarcal1	97	73.876	ENSPMGG00000019092	SMARCAL1	92	74.241	Periophthalmus_magnuspinnatus
ENSACIG00000001500	smarcal1	84	64.319	ENSPCIG00000022514	SMARCAL1	72	64.462	Phascolarctos_cinereus
ENSACIG00000001500	smarcal1	97	74.970	ENSPFOG00000000560	SMARCAL1	93	75.331	Poecilia_formosa
ENSACIG00000001500	smarcal1	97	74.970	ENSPMEG00000018146	SMARCAL1	93	75.331	Poecilia_mexicana
ENSACIG00000001500	smarcal1	67	87.385	ENSPREG00000009591	SMARCAL1	93	87.385	Poecilia_reticulata
ENSACIG00000001500	smarcal1	90	76.143	ENSPNAG00000014900	smarcal1	88	69.202	Pygocentrus_nattereri
ENSACIG00000001500	smarcal1	83	60.030	ENSSHAG00000013538	SMARCAL1	71	60.030	Sarcophilus_harrisii
ENSACIG00000001500	smarcal1	97	83.762	ENSSMAG00000010427	SMARCAL1	93	83.762	Scophthalmus_maximus
ENSACIG00000001500	smarcal1	97	86.164	ENSSDUG00000017470	SMARCAL1	91	86.164	Seriola_dumerili
ENSACIG00000001500	smarcal1	97	85.890	ENSSLDG00000007224	SMARCAL1	93	85.890	Seriola_lalandi_dorsalis
ENSACIG00000001500	smarcal1	89	65.136	ENSSPUG00000015369	SMARCAL1	68	65.136	Sphenodon_punctatus
ENSACIG00000001500	smarcal1	98	84.547	ENSSPAG00000003742	smarcal1	100	84.547	Stegastes_partitus
ENSACIG00000001500	smarcal1	85	59.729	ENSSSCG00000035501	SMARCAL1	73	59.484	Sus_scrofa
ENSACIG00000001500	smarcal1	83	64.615	ENSTGUG00000005079	SMARCAL1	95	64.615	Taeniopygia_guttata
ENSACIG00000001500	smarcal1	96	67.416	ENSTRUG00000010701	SMARCAL1	92	67.416	Takifugu_rubripes
ENSACIG00000001500	smarcal1	84	52.799	ENSTTRG00000009001	SMARCAL1	69	52.799	Tursiops_truncatus
ENSACIG00000001500	smarcal1	85	70.287	ENSXETG00000000465	smarcal1	70	70.287	Xenopus_tropicalis