EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000001537 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 2233 bases
Position: chrCCOE01000075.1:169842-172074
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000001889	RRM_1	PF00076.22	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000001966	-	213	-	ENSACIP00000001889	70 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000001537	-	84	94.915	ENSACIG00000018697	-	87	94.915

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001537	-	83	82.759	ENSG00000154548	SRSF12	73	50.000	Homo_sapiens
ENSACIG00000001537	-	84	94.915	ENSAPOG00000024545	-	92	94.915	Acanthochromis_polyacanthus
ENSACIG00000001537	-	100	92.857	ENSAPEG00000016160	-	100	92.857	Amphiprion_percula
ENSACIG00000001537	-	99	88.571	ENSATEG00000003493	-	97	88.571	Anabas_testudineus
ENSACIG00000001537	-	86	90.000	ENSAMXG00000031867	-	87	90.000	Astyanax_mexicanus
ENSACIG00000001537	-	86	83.333	ENSCHIG00000023999	-	87	83.333	Capra_hircus
ENSACIG00000001537	-	99	63.380	ENSCHIG00000011877	-	93	63.380	Capra_hircus
ENSACIG00000001537	-	86	88.333	ENSDARG00000112572	CR293507.1	100	88.333	Danio_rerio
ENSACIG00000001537	-	87	93.443	ENSFHEG00000000365	-	55	93.443	Fundulus_heteroclitus
ENSACIG00000001537	-	86	93.333	ENSHCOG00000005897	-	88	93.333	Hippocampus_comes
ENSACIG00000001537	-	97	91.176	ENSHCOG00000008417	-	78	91.176	Hippocampus_comes
ENSACIG00000001537	-	86	91.667	ENSIPUG00000023118	-	57	91.667	Ictalurus_punctatus
ENSACIG00000001537	-	90	96.825	ENSLBEG00000012669	-	95	96.825	Labrus_bergylta
ENSACIG00000001537	-	99	85.507	ENSMAMG00000007646	-	76	85.507	Mastacembelus_armatus
ENSACIG00000001537	-	79	92.727	ENSMAMG00000008111	-	83	92.727	Mastacembelus_armatus
ENSACIG00000001537	-	83	81.034	ENSMAUG00000009812	-	85	81.034	Mesocricetus_auratus
ENSACIG00000001537	-	100	94.286	ENSMMOG00000013350	-	100	94.286	Mola_mola
ENSACIG00000001537	-	84	94.915	ENSNBRG00000010616	-	84	94.915	Neolamprologus_brichardi
ENSACIG00000001537	-	91	73.438	ENSODEG00000003118	-	90	73.438	Octodon_degus
ENSACIG00000001537	-	86	78.333	ENSODEG00000000894	-	87	78.333	Octodon_degus
ENSACIG00000001537	-	96	82.090	ENSPKIG00000000613	-	75	82.090	Paramormyrops_kingsleyae
ENSACIG00000001537	-	83	75.862	ENSPEMG00000021564	-	81	75.862	Peromyscus_maniculatus_bairdii
ENSACIG00000001537	-	86	88.333	ENSPNAG00000009501	-	91	88.333	Pygocentrus_nattereri
ENSACIG00000001537	-	96	82.090	ENSSMAG00000018546	-	89	82.090	Scophthalmus_maximus
ENSACIG00000001537	-	86	90.000	ENSSLDG00000002710	-	97	90.000	Seriola_lalandi_dorsalis
ENSACIG00000001537	-	90	90.476	ENSSLDG00000000417	-	84	90.476	Seriola_lalandi_dorsalis
ENSACIG00000001537	-	93	77.612	ENSSPUG00000016216	-	100	77.612	Sphenodon_punctatus
ENSACIG00000001537	-	100	97.143	ENSSPAG00000001821	-	100	97.143	Stegastes_partitus
ENSACIG00000001537	-	86	100.000	ENSTRUG00000019904	-	82	100.000	Takifugu_rubripes