EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000001644 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 2777 bases
Position: chrCCOE01000794.1:282805-285581
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000002047	RF-1	PF00472.20	4.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000002126	-	483	-	ENSACIP00000002047	160 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001644's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001644	si:ch211-275j6.5	74	65.254	ENSG00000130921	C12orf65	80	66.667	Homo_sapiens
ENSACIG00000001644	si:ch211-275j6.5	97	84.516	ENSAPOG00000000995	si:ch211-275j6.5	94	84.516	Acanthochromis_polyacanthus
ENSACIG00000001644	si:ch211-275j6.5	52	71.084	ENSAMEG00000015144	C12orf65	71	62.832	Ailuropoda_melanoleuca
ENSACIG00000001644	si:ch211-275j6.5	97	83.226	ENSAOCG00000005589	si:ch211-275j6.5	97	83.226	Amphiprion_ocellaris
ENSACIG00000001644	si:ch211-275j6.5	97	83.226	ENSAPEG00000024618	si:ch211-275j6.5	94	83.226	Amphiprion_percula
ENSACIG00000001644	si:ch211-275j6.5	96	79.870	ENSATEG00000011661	si:ch211-275j6.5	82	79.870	Anabas_testudineus
ENSACIG00000001644	si:ch211-275j6.5	75	66.667	ENSAPLG00000016073	C12orf65	100	66.667	Anas_platyrhynchos
ENSACIG00000001644	si:ch211-275j6.5	90	61.111	ENSACAG00000015561	C12orf65	71	61.111	Anolis_carolinensis
ENSACIG00000001644	si:ch211-275j6.5	63	69.000	ENSANAG00000022881	C12orf65	82	60.584	Aotus_nancymaae
ENSACIG00000001644	si:ch211-275j6.5	96	88.889	ENSACLG00000023906	si:ch211-275j6.5	92	88.889	Astatotilapia_calliptera
ENSACIG00000001644	si:ch211-275j6.5	81	70.543	ENSAMXG00000031765	si:ch211-275j6.5	79	70.543	Astyanax_mexicanus
ENSACIG00000001644	si:ch211-275j6.5	88	59.859	ENSBTAG00000020503	C17H12orf65	82	59.859	Bos_taurus
ENSACIG00000001644	si:ch211-275j6.5	63	68.000	ENSCJAG00000016579	C12orf65	83	59.854	Callithrix_jacchus
ENSACIG00000001644	si:ch211-275j6.5	84	58.519	ENSCAFG00000007512	C26H12orf65	62	57.823	Canis_familiaris
ENSACIG00000001644	si:ch211-275j6.5	84	58.519	ENSCAFG00020016169	C12orf65	89	57.823	Canis_lupus_dingo
ENSACIG00000001644	si:ch211-275j6.5	81	63.846	ENSCHIG00000022229	C12orf65	73	63.846	Capra_hircus
ENSACIG00000001644	si:ch211-275j6.5	56	70.787	ENSCAPG00000014691	C12orf65	78	56.081	Cavia_aperea
ENSACIG00000001644	si:ch211-275j6.5	62	67.000	ENSCPOG00000007583	C12orf65	77	58.865	Cavia_porcellus
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSCATG00000040685	C12orf65	82	60.584	Cercocebus_atys
ENSACIG00000001644	si:ch211-275j6.5	64	64.078	ENSCLAG00000014329	C12orf65	81	55.333	Chinchilla_lanigera
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSCSAG00000002068	C12orf65	80	60.584	Chlorocebus_sabaeus
ENSACIG00000001644	si:ch211-275j6.5	88	55.319	ENSCPBG00000025970	C12orf65	80	55.319	Chrysemys_picta_bellii
ENSACIG00000001644	si:ch211-275j6.5	69	60.360	ENSCGRG00001013424	2810006K23Rik	79	54.795	Cricetulus_griseus_chok1gshd
ENSACIG00000001644	si:ch211-275j6.5	69	60.360	ENSCGRG00000003037	2810006K23Rik	79	54.795	Cricetulus_griseus_crigri
ENSACIG00000001644	si:ch211-275j6.5	98	64.331	ENSCSEG00000014536	si:ch211-275j6.5	94	64.331	Cynoglossus_semilaevis
ENSACIG00000001644	si:ch211-275j6.5	100	70.122	ENSCVAG00000023000	si:ch211-275j6.5	95	70.122	Cyprinodon_variegatus
ENSACIG00000001644	si:ch211-275j6.5	83	68.657	ENSDARG00000097803	si:ch211-275j6.5	98	68.657	Danio_rerio
ENSACIG00000001644	si:ch211-275j6.5	71	55.752	ENSDNOG00000034728	C12orf65	83	52.555	Dasypus_novemcinctus
ENSACIG00000001644	si:ch211-275j6.5	68	64.815	ENSDORG00000026069	2810006K23Rik	75	60.305	Dipodomys_ordii
ENSACIG00000001644	si:ch211-275j6.5	78	44.355	FBgn0050100	CG30100	85	44.355	Drosophila_melanogaster
ENSACIG00000001644	si:ch211-275j6.5	55	70.455	ENSETEG00000005627	C12orf65	79	61.111	Echinops_telfairi
ENSACIG00000001644	si:ch211-275j6.5	61	70.408	ENSEASG00005012587	C12orf65	77	64.844	Equus_asinus_asinus
ENSACIG00000001644	si:ch211-275j6.5	61	70.408	ENSECAG00000001057	C8H12orf65	77	64.844	Equus_caballus
ENSACIG00000001644	si:ch211-275j6.5	67	66.355	ENSEEUG00000007231	C12orf65	79	60.584	Erinaceus_europaeus
ENSACIG00000001644	si:ch211-275j6.5	96	66.234	ENSELUG00000015178	lg13h12orf65	92	66.234	Esox_lucius
ENSACIG00000001644	si:ch211-275j6.5	69	60.345	ENSFCAG00000015328	C12orf65	85	56.849	Felis_catus
ENSACIG00000001644	si:ch211-275j6.5	63	69.000	ENSFALG00000009261	C12orf65	76	64.754	Ficedula_albicollis
ENSACIG00000001644	si:ch211-275j6.5	100	75.309	ENSFHEG00000017567	si:ch211-275j6.5	96	75.309	Fundulus_heteroclitus
ENSACIG00000001644	si:ch211-275j6.5	79	76.984	ENSGMOG00000012139	si:ch211-275j6.5	85	76.984	Gadus_morhua
ENSACIG00000001644	si:ch211-275j6.5	74	64.706	ENSGALG00000029390	C15H12ORF65	73	64.706	Gallus_gallus
ENSACIG00000001644	si:ch211-275j6.5	96	77.778	ENSGACG00000008255	si:ch211-275j6.5	96	77.778	Gasterosteus_aculeatus
ENSACIG00000001644	si:ch211-275j6.5	69	60.360	ENSGAGG00000000823	C12orf65	86	57.480	Gopherus_agassizii
ENSACIG00000001644	si:ch211-275j6.5	74	65.254	ENSGGOG00000012850	C12orf65	82	61.314	Gorilla_gorilla
ENSACIG00000001644	si:ch211-275j6.5	96	88.889	ENSHBUG00000007273	si:ch211-275j6.5	92	88.889	Haplochromis_burtoni
ENSACIG00000001644	si:ch211-275j6.5	61	67.347	ENSHGLG00000010966	C12orf65	68	62.500	Heterocephalus_glaber_female
ENSACIG00000001644	si:ch211-275j6.5	61	67.347	ENSHGLG00100018631	C12orf65	68	62.500	Heterocephalus_glaber_male
ENSACIG00000001644	si:ch211-275j6.5	94	68.212	ENSHCOG00000019848	si:ch211-275j6.5	89	68.212	Hippocampus_comes
ENSACIG00000001644	si:ch211-275j6.5	88	65.248	ENSIPUG00000020793	si:ch211-275j6.5	87	65.248	Ictalurus_punctatus
ENSACIG00000001644	si:ch211-275j6.5	74	63.559	ENSSTOG00000016463	C12orf65	81	59.441	Ictidomys_tridecemlineatus
ENSACIG00000001644	si:ch211-275j6.5	81	57.692	ENSJJAG00000023360	2810006K23Rik	69	57.692	Jaculus_jaculus
ENSACIG00000001644	si:ch211-275j6.5	83	83.459	ENSKMAG00000018733	si:ch211-275j6.5	83	83.459	Kryptolebias_marmoratus
ENSACIG00000001644	si:ch211-275j6.5	88	63.830	ENSLACG00000017355	C12orf65	84	63.830	Latimeria_chalumnae
ENSACIG00000001644	si:ch211-275j6.5	76	68.595	ENSLOCG00000005702	si:ch211-275j6.5	100	68.595	Lepisosteus_oculatus
ENSACIG00000001644	si:ch211-275j6.5	73	64.103	ENSLAFG00000002134	C12orf65	70	64.103	Loxodonta_africana
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSMMUG00000031495	C12orf65	82	60.584	Macaca_mulatta
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSMNEG00000044673	C12orf65	82	61.314	Macaca_nemestrina
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSMLEG00000044309	C12orf65	82	60.584	Mandrillus_leucophaeus
ENSACIG00000001644	si:ch211-275j6.5	100	81.250	ENSMAMG00000017366	si:ch211-275j6.5	95	81.250	Mastacembelus_armatus
ENSACIG00000001644	si:ch211-275j6.5	96	88.889	ENSMZEG00005000938	si:ch211-275j6.5	91	88.889	Maylandia_zebra
ENSACIG00000001644	si:ch211-275j6.5	78	62.400	ENSMGAG00000003354	C12orf65	92	62.400	Meleagris_gallopavo
ENSACIG00000001644	si:ch211-275j6.5	68	60.550	ENSMAUG00000010304	2810006K23Rik	86	60.550	Mesocricetus_auratus
ENSACIG00000001644	si:ch211-275j6.5	63	68.317	ENSMICG00000037138	C12orf65	78	63.077	Microcebus_murinus
ENSACIG00000001644	si:ch211-275j6.5	66	63.810	ENSMOCG00000017477	2810006K23Rik	79	54.795	Microtus_ochrogaster
ENSACIG00000001644	si:ch211-275j6.5	100	75.776	ENSMMOG00000017134	si:ch211-275j6.5	95	75.776	Mola_mola
ENSACIG00000001644	si:ch211-275j6.5	76	59.016	ENSMODG00000012450	C12orf65	71	59.016	Monodelphis_domestica
ENSACIG00000001644	si:ch211-275j6.5	100	80.625	ENSMALG00000012291	si:ch211-275j6.5	95	80.625	Monopterus_albus
ENSACIG00000001644	si:ch211-275j6.5	61	66.327	MGP_CAROLIEiJ_G0027747	2810006K23Rik	69	60.156	Mus_caroli
ENSACIG00000001644	si:ch211-275j6.5	61	67.347	ENSMUSG00000047635	2810006K23Rik	69	60.938	Mus_musculus
ENSACIG00000001644	si:ch211-275j6.5	61	66.327	MGP_SPRETEiJ_G0028745	2810006K23Rik	69	60.156	Mus_spretus
ENSACIG00000001644	si:ch211-275j6.5	77	60.317	ENSMPUG00000001679	C12orf65	81	58.042	Mustela_putorius_furo
ENSACIG00000001644	si:ch211-275j6.5	88	54.225	ENSMLUG00000007001	C12orf65	85	54.225	Myotis_lucifugus
ENSACIG00000001644	si:ch211-275j6.5	83	61.481	ENSNGAG00000010625	2810006K23Rik	74	61.481	Nannospalax_galili
ENSACIG00000001644	si:ch211-275j6.5	96	87.582	ENSNBRG00000008082	si:ch211-275j6.5	92	87.582	Neolamprologus_brichardi
ENSACIG00000001644	si:ch211-275j6.5	74	64.407	ENSNLEG00000001470	C12orf65	82	60.584	Nomascus_leucogenys
ENSACIG00000001644	si:ch211-275j6.5	76	60.656	ENSMEUG00000009430	C12orf65	78	60.656	Notamacropus_eugenii
ENSACIG00000001644	si:ch211-275j6.5	90	55.556	ENSOPRG00000011029	C12orf65	83	55.556	Ochotona_princeps
ENSACIG00000001644	si:ch211-275j6.5	100	52.795	ENSODEG00000011382	-	89	52.795	Octodon_degus
ENSACIG00000001644	si:ch211-275j6.5	95	82.581	ENSONIG00000013298	si:ch211-275j6.5	93	82.581	Oreochromis_niloticus
ENSACIG00000001644	si:ch211-275j6.5	71	68.421	ENSOANG00000012866	C12orf65	66	68.421	Ornithorhynchus_anatinus
ENSACIG00000001644	si:ch211-275j6.5	72	61.739	ENSOCUG00000011888	C12orf65	77	61.739	Oryctolagus_cuniculus
ENSACIG00000001644	si:ch211-275j6.5	97	80.645	ENSORLG00000006153	si:ch211-275j6.5	92	80.645	Oryzias_latipes
ENSACIG00000001644	si:ch211-275j6.5	97	81.290	ENSORLG00020017188	si:ch211-275j6.5	92	81.290	Oryzias_latipes_hni
ENSACIG00000001644	si:ch211-275j6.5	97	80.645	ENSORLG00015005780	c9h12orf65	92	80.645	Oryzias_latipes_hsok
ENSACIG00000001644	si:ch211-275j6.5	98	77.848	ENSOMEG00000001663	si:ch211-275j6.5	94	77.848	Oryzias_melastigma
ENSACIG00000001644	si:ch211-275j6.5	63	64.356	ENSOGAG00000010778	C12orf65	79	60.000	Otolemur_garnettii
ENSACIG00000001644	si:ch211-275j6.5	81	63.077	ENSOARG00000005214	C12orf65	76	63.077	Ovis_aries
ENSACIG00000001644	si:ch211-275j6.5	74	65.254	ENSPPAG00000029654	C12orf65	82	61.314	Pan_paniscus
ENSACIG00000001644	si:ch211-275j6.5	80	62.791	ENSPPRG00000024772	C12orf65	85	58.219	Panthera_pardus
ENSACIG00000001644	si:ch211-275j6.5	88	58.219	ENSPTIG00000011744	C12orf65	85	58.219	Panthera_tigris_altaica
ENSACIG00000001644	si:ch211-275j6.5	74	65.254	ENSPTRG00000005595	C12H12orf65	82	61.314	Pan_troglodytes
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSPANG00000015388	C12orf65	82	60.584	Papio_anubis
ENSACIG00000001644	si:ch211-275j6.5	98	63.462	ENSPKIG00000001571	si:ch211-275j6.5	93	63.462	Paramormyrops_kingsleyae
ENSACIG00000001644	si:ch211-275j6.5	87	58.273	ENSPSIG00000013010	C12orf65	77	58.273	Pelodiscus_sinensis
ENSACIG00000001644	si:ch211-275j6.5	79	78.740	ENSPMGG00000018342	si:ch211-275j6.5	75	78.740	Periophthalmus_magnuspinnatus
ENSACIG00000001644	si:ch211-275j6.5	69	56.757	ENSPMAG00000000514	si:ch211-275j6.5	100	56.757	Petromyzon_marinus
ENSACIG00000001644	si:ch211-275j6.5	81	56.923	ENSPCIG00000010996	C12orf65	75	56.923	Phascolarctos_cinereus
ENSACIG00000001644	si:ch211-275j6.5	97	74.839	ENSPLAG00000001661	si:ch211-275j6.5	92	74.839	Poecilia_latipinna
ENSACIG00000001644	si:ch211-275j6.5	97	74.839	ENSPMEG00000009201	si:ch211-275j6.5	92	74.839	Poecilia_mexicana
ENSACIG00000001644	si:ch211-275j6.5	97	74.839	ENSPMEG00000018566	si:ch211-275j6.5	92	74.839	Poecilia_mexicana
ENSACIG00000001644	si:ch211-275j6.5	97	74.839	ENSPREG00000021268	si:ch211-275j6.5	92	74.839	Poecilia_reticulata
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSPPYG00000005082	C12orf65	82	60.584	Pongo_abelii
ENSACIG00000001644	si:ch211-275j6.5	66	62.162	ENSPCAG00000016193	C12orf65	87	57.931	Procavia_capensis
ENSACIG00000001644	si:ch211-275j6.5	63	68.317	ENSPCOG00000021574	C12orf65	72	63.077	Propithecus_coquereli
ENSACIG00000001644	si:ch211-275j6.5	86	54.605	ENSPVAG00000015301	C12orf65	91	54.605	Pteropus_vampyrus
ENSACIG00000001644	si:ch211-275j6.5	96	88.889	ENSPNYG00000014456	si:ch211-275j6.5	92	88.889	Pundamilia_nyererei
ENSACIG00000001644	si:ch211-275j6.5	82	68.702	ENSPNAG00000019769	si:ch211-275j6.5	78	68.702	Pygocentrus_nattereri
ENSACIG00000001644	si:ch211-275j6.5	61	67.347	ENSRNOG00000001073	RGD1563482	72	60.606	Rattus_norvegicus
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSRBIG00000040789	C12orf65	82	60.584	Rhinopithecus_bieti
ENSACIG00000001644	si:ch211-275j6.5	63	69.000	ENSRROG00000031384	C12orf65	80	59.854	Rhinopithecus_roxellana
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSSBOG00000026629	C12orf65	80	61.314	Saimiri_boliviensis_boliviensis
ENSACIG00000001644	si:ch211-275j6.5	69	64.865	ENSSHAG00000014988	C12orf65	63	62.609	Sarcophilus_harrisii
ENSACIG00000001644	si:ch211-275j6.5	97	61.875	ENSSFOG00015019122	si:ch211-275j6.5	91	61.875	Scleropages_formosus
ENSACIG00000001644	si:ch211-275j6.5	97	81.290	ENSSMAG00000016770	si:ch211-275j6.5	92	81.290	Scophthalmus_maximus
ENSACIG00000001644	si:ch211-275j6.5	81	86.047	ENSSDUG00000020401	si:ch211-275j6.5	82	86.047	Seriola_dumerili
ENSACIG00000001644	si:ch211-275j6.5	97	80.645	ENSSLDG00000017638	si:ch211-275j6.5	92	80.645	Seriola_lalandi_dorsalis
ENSACIG00000001644	si:ch211-275j6.5	84	60.741	ENSSPUG00000012613	C12orf65	82	60.741	Sphenodon_punctatus
ENSACIG00000001644	si:ch211-275j6.5	97	80.000	ENSSPAG00000023476	si:ch211-275j6.5	92	80.000	Stegastes_partitus
ENSACIG00000001644	si:ch211-275j6.5	71	64.407	ENSSSCG00000009774	C12orf65	79	64.407	Sus_scrofa
ENSACIG00000001644	si:ch211-275j6.5	75	63.333	ENSTGUG00000005440	C12orf65	94	63.333	Taeniopygia_guttata
ENSACIG00000001644	si:ch211-275j6.5	100	71.875	ENSTNIG00000015832	si:ch211-275j6.5	95	71.875	Tetraodon_nigroviridis
ENSACIG00000001644	si:ch211-275j6.5	63	70.000	ENSTBEG00000012500	C12orf65	78	63.846	Tupaia_belangeri
ENSACIG00000001644	si:ch211-275j6.5	73	64.957	ENSTTRG00000015880	C12orf65	75	64.286	Tursiops_truncatus
ENSACIG00000001644	si:ch211-275j6.5	71	62.281	ENSUAMG00000019669	C12orf65	87	57.639	Ursus_americanus
ENSACIG00000001644	si:ch211-275j6.5	71	62.281	ENSUMAG00000004025	C12orf65	87	57.639	Ursus_maritimus
ENSACIG00000001644	si:ch211-275j6.5	84	58.519	ENSVVUG00000027811	C12orf65	89	57.823	Vulpes_vulpes
ENSACIG00000001644	si:ch211-275j6.5	97	76.774	ENSXCOG00000000975	si:ch211-275j6.5	92	76.774	Xiphophorus_couchianus