EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000001646 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 1357 bases
Position: chrCCOE01001595.1:87674-89030
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000002022	Mitoc_L55	PF09776.9	2.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000002099	-	411	-	ENSACIP00000002022	136 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001646	zgc:171480	97	69.444	ENSAPOG00000002881	zgc:171480	100	69.444	Acanthochromis_polyacanthus
ENSACIG00000001646	zgc:171480	97	72.222	ENSAOCG00000016155	zgc:171480	100	72.222	Amphiprion_ocellaris
ENSACIG00000001646	zgc:171480	97	72.222	ENSAPEG00000022327	zgc:171480	100	72.222	Amphiprion_percula
ENSACIG00000001646	zgc:171480	99	67.808	ENSATEG00000005625	zgc:171480	99	67.808	Anabas_testudineus
ENSACIG00000001646	zgc:171480	89	53.279	ENSACAG00000006897	-	91	53.279	Anolis_carolinensis
ENSACIG00000001646	zgc:171480	99	82.609	ENSACLG00000005172	zgc:171480	100	82.609	Astatotilapia_calliptera
ENSACIG00000001646	zgc:171480	96	54.198	ENSAMXG00000043839	zgc:171480	99	54.198	Astyanax_mexicanus
ENSACIG00000001646	zgc:171480	74	57.843	ENSCPBG00000001771	-	80	57.843	Chrysemys_picta_bellii
ENSACIG00000001646	zgc:171480	98	55.797	ENSCSEG00000019533	zgc:171480	98	55.797	Cynoglossus_semilaevis
ENSACIG00000001646	zgc:171480	88	56.198	ENSDARG00000043402	zgc:171480	89	56.198	Danio_rerio
ENSACIG00000001646	zgc:171480	96	50.758	ENSELUG00000007716	zgc:171480	100	50.758	Esox_lucius
ENSACIG00000001646	zgc:171480	67	47.253	ENSFALG00000001083	-	94	47.253	Ficedula_albicollis
ENSACIG00000001646	zgc:171480	76	73.786	ENSFHEG00000000203	zgc:171480	76	72.381	Fundulus_heteroclitus
ENSACIG00000001646	zgc:171480	75	69.608	ENSGMOG00000019009	zgc:171480	100	69.608	Gadus_morhua
ENSACIG00000001646	zgc:171480	76	50.485	ENSGALG00000038820	-	90	50.000	Gallus_gallus
ENSACIG00000001646	zgc:171480	88	62.400	ENSGAFG00000004832	-	87	62.400	Gambusia_affinis
ENSACIG00000001646	zgc:171480	68	78.261	ENSGACG00000002136	zgc:171480	100	78.261	Gasterosteus_aculeatus
ENSACIG00000001646	zgc:171480	74	56.000	ENSGAGG00000001806	-	81	56.000	Gopherus_agassizii
ENSACIG00000001646	zgc:171480	99	82.609	ENSHBUG00000007895	zgc:171480	100	82.609	Haplochromis_burtoni
ENSACIG00000001646	zgc:171480	92	65.600	ENSHCOG00000003526	zgc:171480	68	65.600	Hippocampus_comes
ENSACIG00000001646	zgc:171480	96	50.758	ENSIPUG00000001273	mrpl55	99	50.758	Ictalurus_punctatus
ENSACIG00000001646	zgc:171480	76	69.903	ENSKMAG00000002011	zgc:171480	81	69.903	Kryptolebias_marmoratus
ENSACIG00000001646	zgc:171480	97	70.455	ENSLBEG00000010915	zgc:171480	100	70.455	Labrus_bergylta
ENSACIG00000001646	zgc:171480	97	70.455	ENSLBEG00000016107	-	100	70.455	Labrus_bergylta
ENSACIG00000001646	zgc:171480	78	59.813	ENSLACG00000016281	zgc:171480	81	59.813	Latimeria_chalumnae
ENSACIG00000001646	zgc:171480	99	69.388	ENSMAMG00000022250	zgc:171480	100	69.388	Mastacembelus_armatus
ENSACIG00000001646	zgc:171480	99	81.884	ENSMZEG00005015585	zgc:171480	100	81.884	Maylandia_zebra
ENSACIG00000001646	zgc:171480	76	51.429	ENSMGAG00000002612	-	90	51.429	Meleagris_gallopavo
ENSACIG00000001646	zgc:171480	84	51.754	ENSMMOG00000008740	-	87	51.754	Mola_mola
ENSACIG00000001646	zgc:171480	79	68.224	ENSMALG00000019823	zgc:171480	85	68.224	Monopterus_albus
ENSACIG00000001646	zgc:171480	99	81.884	ENSNBRG00000019447	zgc:171480	100	81.884	Neolamprologus_brichardi
ENSACIG00000001646	zgc:171480	97	82.963	ENSONIG00000007645	zgc:171480	100	82.963	Oreochromis_niloticus
ENSACIG00000001646	zgc:171480	76	68.269	ENSORLG00020006963	zgc:171480	78	68.269	Oryzias_latipes_hni
ENSACIG00000001646	zgc:171480	76	69.231	ENSORLG00015003266	zgc:171480	78	69.231	Oryzias_latipes_hsok
ENSACIG00000001646	zgc:171480	76	69.231	ENSOMEG00000008184	zgc:171480	76	69.231	Oryzias_melastigma
ENSACIG00000001646	zgc:171480	77	58.491	ENSPKIG00000006753	zgc:171480	82	58.491	Paramormyrops_kingsleyae
ENSACIG00000001646	zgc:171480	74	56.000	ENSPSIG00000010893	-	80	56.000	Pelodiscus_sinensis
ENSACIG00000001646	zgc:171480	78	62.617	ENSPMGG00000012657	-	83	62.617	Periophthalmus_magnuspinnatus
ENSACIG00000001646	zgc:171480	68	45.263	ENSPMAG00000000867	zgc:171480	88	43.689	Petromyzon_marinus
ENSACIG00000001646	zgc:171480	73	55.000	ENSPCIG00000021848	-	79	55.000	Phascolarctos_cinereus
ENSACIG00000001646	zgc:171480	76	72.816	ENSPFOG00000012703	zgc:171480	74	72.816	Poecilia_formosa
ENSACIG00000001646	zgc:171480	94	62.406	ENSPREG00000020328	zgc:171480	95	62.406	Poecilia_reticulata
ENSACIG00000001646	zgc:171480	77	60.377	ENSPNAG00000017309	zgc:171480	80	60.377	Pygocentrus_nattereri
ENSACIG00000001646	zgc:171480	96	54.478	ENSSFOG00015015668	mrpl55	100	54.478	Scleropages_formosus
ENSACIG00000001646	zgc:171480	99	67.857	ENSSMAG00000005429	zgc:171480	99	67.857	Scophthalmus_maximus
ENSACIG00000001646	zgc:171480	98	67.857	ENSSDUG00000022556	zgc:171480	95	67.857	Seriola_dumerili
ENSACIG00000001646	zgc:171480	98	67.143	ENSSLDG00000019598	zgc:171480	95	67.143	Seriola_lalandi_dorsalis
ENSACIG00000001646	zgc:171480	76	50.485	ENSSPUG00000000735	-	82	50.485	Sphenodon_punctatus
ENSACIG00000001646	zgc:171480	97	71.631	ENSSPAG00000011598	zgc:171480	100	71.631	Stegastes_partitus
ENSACIG00000001646	zgc:171480	75	69.608	ENSTRUG00000003082	zgc:171480	72	69.608	Takifugu_rubripes
ENSACIG00000001646	zgc:171480	68	75.269	ENSXCOG00000005887	zgc:171480	76	75.269	Xiphophorus_couchianus
ENSACIG00000001646	zgc:171480	76	72.816	ENSXMAG00000007937	zgc:171480	100	57.857	Xiphophorus_maculatus