EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000001764 (Gene tree)
Gene ID: -
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein 200 (U5)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 12537 bases
Position: chrCCOE01001313.1:102767-115303
Accession: ZDB-GENE-081105-64
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000002273	ResIII	PF04851.15	6.6e-26	1	2
ENSACIP00000002273	ResIII	PF04851.15	6.6e-26	2	2
ENSACIP00000002273	DEAD	PF00270.29	2.2e-53	1	2
ENSACIP00000002273	DEAD	PF00270.29	2.2e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000002359	-	5712	-	ENSACIP00000002273	1903 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000001764	snrnp200	70	31.522	ENSACIG00000021553	hfm1	68	31.522
ENSACIG00000001764	snrnp200	93	42.534	ENSACIG00000004551	ascc3	72	47.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001764	snrnp200	98	90.257	ENSG00000144028	SNRNP200	97	90.257	Homo_sapiens
ENSACIG00000001764	snrnp200	98	97.964	ENSAPOG00000010223	snrnp200	97	97.964	Acanthochromis_polyacanthus
ENSACIG00000001764	snrnp200	98	90.310	ENSAMEG00000008996	SNRNP200	97	90.310	Ailuropoda_melanoleuca
ENSACIG00000001764	snrnp200	98	97.856	ENSAOCG00000024593	snrnp200	100	97.213	Amphiprion_ocellaris
ENSACIG00000001764	snrnp200	98	97.213	ENSAPEG00000012554	snrnp200	100	97.213	Amphiprion_percula
ENSACIG00000001764	snrnp200	98	97.803	ENSATEG00000022522	snrnp200	97	97.803	Anabas_testudineus
ENSACIG00000001764	snrnp200	98	90.364	ENSAPLG00000004313	SNRNP200	98	90.364	Anas_platyrhynchos
ENSACIG00000001764	snrnp200	97	89.442	ENSACAG00000000434	SNRNP200	97	89.442	Anolis_carolinensis
ENSACIG00000001764	snrnp200	98	87.080	ENSANAG00000036625	SNRNP200	97	87.080	Aotus_nancymaae
ENSACIG00000001764	snrnp200	98	98.607	ENSACLG00000011188	snrnp200	97	98.607	Astatotilapia_calliptera
ENSACIG00000001764	snrnp200	98	94.370	ENSAMXG00000005684	snrnp200	97	94.319	Astyanax_mexicanus
ENSACIG00000001764	snrnp200	98	89.936	ENSBTAG00000000848	SNRNP200	97	89.936	Bos_taurus
ENSACIG00000001764	snrnp200	98	90.203	ENSCJAG00000007514	SNRNP200	97	90.203	Callithrix_jacchus
ENSACIG00000001764	snrnp200	98	89.387	ENSCAFG00020019979	SNRNP200	99	91.778	Canis_lupus_dingo
ENSACIG00000001764	snrnp200	98	90.150	ENSCHIG00000020611	SNRNP200	97	90.150	Capra_hircus
ENSACIG00000001764	snrnp200	98	90.310	ENSTSYG00000010467	SNRNP200	97	90.310	Carlito_syrichta
ENSACIG00000001764	snrnp200	98	89.856	ENSCAPG00000017234	SNRNP200	98	89.856	Cavia_aperea
ENSACIG00000001764	snrnp200	98	90.096	ENSCPOG00000006776	SNRNP200	97	90.096	Cavia_porcellus
ENSACIG00000001764	snrnp200	98	90.203	ENSCCAG00000033962	SNRNP200	97	90.203	Cebus_capucinus
ENSACIG00000001764	snrnp200	98	90.257	ENSCATG00000015790	SNRNP200	97	90.257	Cercocebus_atys
ENSACIG00000001764	snrnp200	98	90.096	ENSCLAG00000004116	SNRNP200	97	90.096	Chinchilla_lanigera
ENSACIG00000001764	snrnp200	98	90.257	ENSCSAG00000017369	SNRNP200	97	90.257	Chlorocebus_sabaeus
ENSACIG00000001764	snrnp200	74	92.105	ENSCHOG00000012981	-	55	92.105	Choloepus_hoffmanni
ENSACIG00000001764	snrnp200	98	90.005	ENSCPBG00000022571	SNRNP200	97	90.005	Chrysemys_picta_bellii
ENSACIG00000001764	snrnp200	98	75.934	ENSCING00000005082	-	97	76.147	Ciona_intestinalis
ENSACIG00000001764	snrnp200	94	90.173	ENSCANG00000033932	SNRNP200	99	90.123	Colobus_angolensis_palliatus
ENSACIG00000001764	snrnp200	98	90.257	ENSCGRG00001022610	Snrnp200	97	90.257	Cricetulus_griseus_chok1gshd
ENSACIG00000001764	snrnp200	98	89.685	ENSCGRG00000016472	Snrnp200	97	89.685	Cricetulus_griseus_crigri
ENSACIG00000001764	snrnp200	98	96.086	ENSCSEG00000016399	snrnp200	97	96.034	Cynoglossus_semilaevis
ENSACIG00000001764	snrnp200	98	90.890	ENSCVAG00000017631	snrnp200	97	90.890	Cyprinodon_variegatus
ENSACIG00000001764	snrnp200	98	94.477	ENSDARG00000077536	snrnp200	97	94.427	Danio_rerio
ENSACIG00000001764	snrnp200	98	88.704	ENSDNOG00000011227	SNRNP200	97	88.704	Dasypus_novemcinctus
ENSACIG00000001764	snrnp200	98	87.553	ENSDORG00000005861	Snrnp200	97	87.553	Dipodomys_ordii
ENSACIG00000001764	snrnp200	98	73.003	FBgn0263599	l(3)72Ab	97	73.110	Drosophila_melanogaster
ENSACIG00000001764	snrnp200	93	95.192	ENSETEG00000000162	SNRNP200	67	95.192	Echinops_telfairi
ENSACIG00000001764	snrnp200	82	80.538	ENSEBUG00000016524	snrnp200	95	80.538	Eptatretus_burgeri
ENSACIG00000001764	snrnp200	98	89.078	ENSEASG00005001884	SNRNP200	97	88.972	Equus_asinus_asinus
ENSACIG00000001764	snrnp200	98	90.514	ENSECAG00000019675	SNRNP200	97	90.257	Equus_caballus
ENSACIG00000001764	snrnp200	90	88.934	ENSEEUG00000012178	SNRNP200	89	89.013	Erinaceus_europaeus
ENSACIG00000001764	snrnp200	98	95.983	ENSELUG00000018948	snrnp200	97	95.983	Esox_lucius
ENSACIG00000001764	snrnp200	98	90.310	ENSFCAG00000010699	SNRNP200	97	90.310	Felis_catus
ENSACIG00000001764	snrnp200	92	84.800	ENSFALG00000001368	-	93	84.800	Ficedula_albicollis
ENSACIG00000001764	snrnp200	98	90.043	ENSFDAG00000004683	SNRNP200	97	90.043	Fukomys_damarensis
ENSACIG00000001764	snrnp200	98	93.837	ENSFHEG00000003786	snrnp200	97	93.837	Fundulus_heteroclitus
ENSACIG00000001764	snrnp200	98	94.593	ENSGMOG00000004881	snrnp200	97	94.433	Gadus_morhua
ENSACIG00000001764	snrnp200	98	94.105	ENSGAFG00000010807	snrnp200	97	94.105	Gambusia_affinis
ENSACIG00000001764	snrnp200	98	97.111	ENSGACG00000011474	snrnp200	97	97.111	Gasterosteus_aculeatus
ENSACIG00000001764	snrnp200	91	93.594	ENSGAGG00000016069	SNRNP200	97	90.336	Gopherus_agassizii
ENSACIG00000001764	snrnp200	98	90.257	ENSGGOG00000005174	SNRNP200	97	92.262	Gorilla_gorilla
ENSACIG00000001764	snrnp200	98	95.842	ENSHBUG00000011322	snrnp200	99	95.842	Haplochromis_burtoni
ENSACIG00000001764	snrnp200	98	90.096	ENSHGLG00000006654	SNRNP200	97	90.096	Heterocephalus_glaber_female
ENSACIG00000001764	snrnp200	98	90.096	ENSHGLG00100018594	SNRNP200	97	90.096	Heterocephalus_glaber_male
ENSACIG00000001764	snrnp200	98	90.257	ENSSTOG00000016351	SNRNP200	97	90.257	Ictidomys_tridecemlineatus
ENSACIG00000001764	snrnp200	98	90.203	ENSJJAG00000023659	Snrnp200	97	90.203	Jaculus_jaculus
ENSACIG00000001764	snrnp200	98	93.967	ENSKMAG00000003665	snrnp200	97	93.967	Kryptolebias_marmoratus
ENSACIG00000001764	snrnp200	98	97.535	ENSLBEG00000021585	snrnp200	97	97.535	Labrus_bergylta
ENSACIG00000001764	snrnp200	80	92.328	ENSLACG00000000226	SNRNP200	99	92.328	Latimeria_chalumnae
ENSACIG00000001764	snrnp200	98	93.951	ENSLOCG00000015198	snrnp200	97	93.951	Lepisosteus_oculatus
ENSACIG00000001764	snrnp200	98	89.936	ENSLAFG00000015626	SNRNP200	97	89.936	Loxodonta_africana
ENSACIG00000001764	snrnp200	98	90.203	ENSMFAG00000040174	SNRNP200	99	91.860	Macaca_fascicularis
ENSACIG00000001764	snrnp200	98	90.203	ENSMMUG00000023261	SNRNP200	97	90.203	Macaca_mulatta
ENSACIG00000001764	snrnp200	98	90.150	ENSMNEG00000032398	SNRNP200	97	90.150	Macaca_nemestrina
ENSACIG00000001764	snrnp200	98	90.257	ENSMLEG00000019083	SNRNP200	99	91.860	Mandrillus_leucophaeus
ENSACIG00000001764	snrnp200	98	97.108	ENSMAMG00000007851	snrnp200	97	97.108	Mastacembelus_armatus
ENSACIG00000001764	snrnp200	98	95.842	ENSMZEG00005010787	snrnp200	99	95.842	Maylandia_zebra
ENSACIG00000001764	snrnp200	97	90.108	ENSMGAG00000001831	SNRNP200	99	90.114	Meleagris_gallopavo
ENSACIG00000001764	snrnp200	98	90.310	ENSMAUG00000011825	Snrnp200	97	90.310	Mesocricetus_auratus
ENSACIG00000001764	snrnp200	98	90.310	ENSMICG00000004710	SNRNP200	98	91.549	Microcebus_murinus
ENSACIG00000001764	snrnp200	98	88.330	ENSMOCG00000011814	Snrnp200	97	88.330	Microtus_ochrogaster
ENSACIG00000001764	snrnp200	98	95.016	ENSMMOG00000014167	snrnp200	97	95.016	Mola_mola
ENSACIG00000001764	snrnp200	98	90.257	ENSMODG00000008475	SNRNP200	97	90.257	Monodelphis_domestica
ENSACIG00000001764	snrnp200	98	97.213	ENSMALG00000001973	snrnp200	97	97.213	Monopterus_albus
ENSACIG00000001764	snrnp200	98	90.150	MGP_CAROLIEiJ_G0024250	Snrnp200	97	90.150	Mus_caroli
ENSACIG00000001764	snrnp200	98	90.203	ENSMUSG00000003660	Snrnp200	97	90.203	Mus_musculus
ENSACIG00000001764	snrnp200	98	90.203	MGP_PahariEiJ_G0025695	Snrnp200	97	90.203	Mus_pahari
ENSACIG00000001764	snrnp200	95	95.172	MGP_SPRETEiJ_G0025170	Snrnp200	96	95.172	Mus_spretus
ENSACIG00000001764	snrnp200	98	90.257	ENSMPUG00000008949	SNRNP200	97	90.257	Mustela_putorius_furo
ENSACIG00000001764	snrnp200	98	87.152	ENSMLUG00000027511	-	97	87.152	Myotis_lucifugus
ENSACIG00000001764	snrnp200	98	89.792	ENSMLUG00000010493	SNRNP200	97	89.792	Myotis_lucifugus
ENSACIG00000001764	snrnp200	98	90.257	ENSNGAG00000021993	Snrnp200	97	90.257	Nannospalax_galili
ENSACIG00000001764	snrnp200	91	98.379	ENSNBRG00000017960	snrnp200	98	98.379	Neolamprologus_brichardi
ENSACIG00000001764	snrnp200	98	85.449	ENSNLEG00000000025	SNRNP200	97	85.449	Nomascus_leucogenys
ENSACIG00000001764	snrnp200	97	88.828	ENSMEUG00000010532	SNRNP200	71	88.828	Notamacropus_eugenii
ENSACIG00000001764	snrnp200	96	89.173	ENSOPRG00000015464	SNRNP200	96	89.136	Ochotona_princeps
ENSACIG00000001764	snrnp200	98	90.043	ENSODEG00000008366	SNRNP200	97	90.043	Octodon_degus
ENSACIG00000001764	snrnp200	98	98.392	ENSONIG00000010714	snrnp200	97	98.392	Oreochromis_niloticus
ENSACIG00000001764	snrnp200	98	90.310	ENSOCUG00000009864	SNRNP200	97	90.310	Oryctolagus_cuniculus
ENSACIG00000001764	snrnp200	98	96.409	ENSORLG00000012286	snrnp200	99	96.618	Oryzias_latipes
ENSACIG00000001764	snrnp200	98	96.517	ENSORLG00020004648	snrnp200	97	96.517	Oryzias_latipes_hni
ENSACIG00000001764	snrnp200	98	96.570	ENSORLG00015019114	snrnp200	99	96.698	Oryzias_latipes_hsok
ENSACIG00000001764	snrnp200	98	96.838	ENSOMEG00000011834	snrnp200	97	96.838	Oryzias_melastigma
ENSACIG00000001764	snrnp200	98	90.310	ENSOGAG00000006879	SNRNP200	97	90.310	Otolemur_garnettii
ENSACIG00000001764	snrnp200	98	89.834	ENSOARG00000013949	SNRNP200	97	89.834	Ovis_aries
ENSACIG00000001764	snrnp200	98	90.257	ENSPPAG00000041559	SNRNP200	97	90.257	Pan_paniscus
ENSACIG00000001764	snrnp200	98	90.310	ENSPPRG00000004435	SNRNP200	97	90.310	Panthera_pardus
ENSACIG00000001764	snrnp200	98	89.829	ENSPTIG00000006380	SNRNP200	97	89.829	Panthera_tigris_altaica
ENSACIG00000001764	snrnp200	98	90.257	ENSPTRG00000012230	SNRNP200	97	90.257	Pan_troglodytes
ENSACIG00000001764	snrnp200	98	90.203	ENSPANG00000006017	SNRNP200	97	90.203	Papio_anubis
ENSACIG00000001764	snrnp200	98	94.644	ENSPKIG00000014762	snrnp200	99	94.823	Paramormyrops_kingsleyae
ENSACIG00000001764	snrnp200	98	89.085	ENSPSIG00000008580	SNRNP200	97	89.085	Pelodiscus_sinensis
ENSACIG00000001764	snrnp200	98	90.150	ENSPCIG00000023050	SNRNP200	97	90.150	Phascolarctos_cinereus
ENSACIG00000001764	snrnp200	98	96.733	ENSPFOG00000015110	snrnp200	97	96.733	Poecilia_formosa
ENSACIG00000001764	snrnp200	97	96.810	ENSPLAG00000006711	snrnp200	99	96.810	Poecilia_latipinna
ENSACIG00000001764	snrnp200	97	96.645	ENSPMEG00000021166	snrnp200	99	96.645	Poecilia_mexicana
ENSACIG00000001764	snrnp200	98	96.624	ENSPREG00000008875	snrnp200	97	96.624	Poecilia_reticulata
ENSACIG00000001764	snrnp200	98	90.257	ENSPPYG00000012068	SNRNP200	97	90.257	Pongo_abelii
ENSACIG00000001764	snrnp200	96	94.872	ENSPCAG00000008536	SNRNP200	83	94.872	Procavia_capensis
ENSACIG00000001764	snrnp200	98	90.257	ENSPCOG00000024608	SNRNP200	97	90.257	Propithecus_coquereli
ENSACIG00000001764	snrnp200	93	91.041	ENSPVAG00000005860	SNRNP200	89	90.921	Pteropus_vampyrus
ENSACIG00000001764	snrnp200	98	93.109	ENSPNYG00000017476	snrnp200	97	93.109	Pundamilia_nyererei
ENSACIG00000001764	snrnp200	98	89.663	ENSPNAG00000010998	snrnp200	97	89.663	Pygocentrus_nattereri
ENSACIG00000001764	snrnp200	98	90.310	ENSRNOG00000012157	Snrnp200	97	90.310	Rattus_norvegicus
ENSACIG00000001764	snrnp200	98	90.257	ENSRBIG00000044690	-	97	90.257	Rhinopithecus_bieti
ENSACIG00000001764	snrnp200	98	90.257	ENSRROG00000037952	-	97	90.257	Rhinopithecus_roxellana
ENSACIG00000001764	snrnp200	98	90.203	ENSSBOG00000035471	SNRNP200	97	92.035	Saimiri_boliviensis_boliviensis
ENSACIG00000001764	snrnp200	97	90.162	ENSSHAG00000000758	SNRNP200	99	90.168	Sarcophilus_harrisii
ENSACIG00000001764	snrnp200	98	94.965	ENSSFOG00015018826	snrnp200	97	94.965	Scleropages_formosus
ENSACIG00000001764	snrnp200	98	97.750	ENSSMAG00000005463	snrnp200	99	97.750	Scophthalmus_maximus
ENSACIG00000001764	snrnp200	98	98.124	ENSSDUG00000021410	snrnp200	97	98.124	Seriola_dumerili
ENSACIG00000001764	snrnp200	98	98.178	ENSSLDG00000010884	snrnp200	97	98.178	Seriola_lalandi_dorsalis
ENSACIG00000001764	snrnp200	94	87.311	ENSSARG00000010728	SNRNP200	92	87.252	Sorex_araneus
ENSACIG00000001764	snrnp200	98	90.257	ENSSPUG00000003726	-	97	90.257	Sphenodon_punctatus
ENSACIG00000001764	snrnp200	99	97.310	ENSSPAG00000001842	snrnp200	99	97.310	Stegastes_partitus
ENSACIG00000001764	snrnp200	99	90.058	ENSSSCG00000008127	SNRNP200	99	90.058	Sus_scrofa
ENSACIG00000001764	snrnp200	96	81.944	ENSTGUG00000014475	-	98	81.870	Taeniopygia_guttata
ENSACIG00000001764	snrnp200	98	96.249	ENSTRUG00000001307	snrnp200	97	96.249	Takifugu_rubripes
ENSACIG00000001764	snrnp200	98	90.972	ENSTNIG00000004320	snrnp200	97	82.567	Tetraodon_nigroviridis
ENSACIG00000001764	snrnp200	78	92.958	ENSTBEG00000003329	-	54	92.958	Tupaia_belangeri
ENSACIG00000001764	snrnp200	98	90.096	ENSTTRG00000004983	SNRNP200	97	90.096	Tursiops_truncatus
ENSACIG00000001764	snrnp200	81	82.569	ENSUAMG00000008395	-	90	82.263	Ursus_americanus
ENSACIG00000001764	snrnp200	98	90.310	ENSUMAG00000012385	SNRNP200	97	90.310	Ursus_maritimus
ENSACIG00000001764	snrnp200	83	92.946	ENSVPAG00000006434	SNRNP200	53	92.946	Vicugna_pacos
ENSACIG00000001764	snrnp200	99	89.499	ENSVVUG00000026247	SNRNP200	99	89.499	Vulpes_vulpes
ENSACIG00000001764	snrnp200	98	89.984	ENSXETG00000001243	snrnp200	97	89.984	Xenopus_tropicalis
ENSACIG00000001764	snrnp200	99	96.277	ENSXMAG00000002058	snrnp200	98	96.277	Xiphophorus_maculatus