EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000001939 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: zgc:56289
Full Name: RAD54 like
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 12630 bases
Position: chrCCOE01001595.1:414473-427102
Accession: ZDB-GENE-040426-968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000002425	ResIII	PF04851.15	4.9e-09	1	1
ENSACIP00000002425	DEAD	PF00270.29	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000002515	-	2232	-	ENSACIP00000002425	743 (aa)	-	-

Gene Model

Click here to download ENSACIG00000001939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000001939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000001939	rad54l	67	31.412	ENSACIG00000001164	chd1l	51	30.677
ENSACIG00000001939	rad54l	78	47.138	ENSACIG00000013005	rad54b	66	47.138

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000001939	rad54l	99	78.389	ENSG00000085999	RAD54L	94	85.938	Homo_sapiens
ENSACIG00000001939	rad54l	99	86.198	ENSAPOG00000011643	rad54l	100	86.198	Acanthochromis_polyacanthus
ENSACIG00000001939	rad54l	99	76.676	ENSAMEG00000013902	RAD54L	99	76.676	Ailuropoda_melanoleuca
ENSACIG00000001939	rad54l	99	89.660	ENSAOCG00000017576	rad54l	99	89.660	Amphiprion_ocellaris
ENSACIG00000001939	rad54l	96	89.311	ENSAPEG00000020658	rad54l	98	89.311	Amphiprion_percula
ENSACIG00000001939	rad54l	94	89.601	ENSATEG00000006767	rad54l	100	89.601	Anabas_testudineus
ENSACIG00000001939	rad54l	94	81.831	ENSAPLG00000006389	RAD54L	99	81.831	Anas_platyrhynchos
ENSACIG00000001939	rad54l	99	79.515	ENSACAG00000002312	RAD54L	99	79.515	Anolis_carolinensis
ENSACIG00000001939	rad54l	99	78.016	ENSANAG00000035439	RAD54L	99	77.987	Aotus_nancymaae
ENSACIG00000001939	rad54l	99	91.057	ENSACLG00000018711	rad54l	99	91.057	Astatotilapia_calliptera
ENSACIG00000001939	rad54l	99	85.155	ENSAMXG00000012777	rad54l	99	85.155	Astyanax_mexicanus
ENSACIG00000001939	rad54l	99	77.346	ENSBTAG00000019901	RAD54L	99	77.346	Bos_taurus
ENSACIG00000001939	rad54l	91	58.651	WBGene00004298	rad-54	83	58.651	Caenorhabditis_elegans
ENSACIG00000001939	rad54l	99	75.871	ENSCJAG00000021080	RAD54L	94	77.540	Callithrix_jacchus
ENSACIG00000001939	rad54l	99	77.450	ENSCAFG00000004272	RAD54L	99	77.450	Canis_familiaris
ENSACIG00000001939	rad54l	99	77.480	ENSCAFG00020015066	RAD54L	99	77.480	Canis_lupus_dingo
ENSACIG00000001939	rad54l	99	77.242	ENSCHIG00000020118	RAD54L	99	77.242	Capra_hircus
ENSACIG00000001939	rad54l	99	77.078	ENSTSYG00000002032	RAD54L	99	77.078	Carlito_syrichta
ENSACIG00000001939	rad54l	99	77.718	ENSCPOG00000006768	RAD54L	99	77.718	Cavia_porcellus
ENSACIG00000001939	rad54l	99	78.523	ENSCCAG00000025783	RAD54L	99	78.523	Cebus_capucinus
ENSACIG00000001939	rad54l	99	77.852	ENSCATG00000030589	RAD54L	99	77.852	Cercocebus_atys
ENSACIG00000001939	rad54l	99	77.987	ENSCLAG00000004645	RAD54L	99	77.987	Chinchilla_lanigera
ENSACIG00000001939	rad54l	99	77.852	ENSCSAG00000001229	RAD54L	99	77.852	Chlorocebus_sabaeus
ENSACIG00000001939	rad54l	99	80.458	ENSCPBG00000005675	RAD54L	99	80.458	Chrysemys_picta_bellii
ENSACIG00000001939	rad54l	99	62.661	ENSCING00000024456	-	99	62.532	Ciona_intestinalis
ENSACIG00000001939	rad54l	99	62.435	ENSCSAVG00000010859	-	99	62.565	Ciona_savignyi
ENSACIG00000001939	rad54l	99	77.852	ENSCANG00000034891	RAD54L	99	77.852	Colobus_angolensis_palliatus
ENSACIG00000001939	rad54l	99	77.389	ENSCGRG00001014807	Rad54l	99	77.389	Cricetulus_griseus_chok1gshd
ENSACIG00000001939	rad54l	99	77.389	ENSCGRG00000016038	Rad54l	99	77.389	Cricetulus_griseus_crigri
ENSACIG00000001939	rad54l	99	85.521	ENSCSEG00000001983	rad54l	99	85.521	Cynoglossus_semilaevis
ENSACIG00000001939	rad54l	77	87.097	ENSCVAG00000019561	rad54l	100	87.097	Cyprinodon_variegatus
ENSACIG00000001939	rad54l	99	83.762	ENSDARG00000018623	rad54l	99	83.762	Danio_rerio
ENSACIG00000001939	rad54l	99	76.510	ENSDNOG00000003395	RAD54L	99	76.510	Dasypus_novemcinctus
ENSACIG00000001939	rad54l	99	70.159	ENSDORG00000002632	Rad54l	99	70.292	Dipodomys_ordii
ENSACIG00000001939	rad54l	99	54.692	FBgn0002989	okr	93	54.692	Drosophila_melanogaster
ENSACIG00000001939	rad54l	77	76.368	ENSETEG00000000550	RAD54L	78	76.368	Echinops_telfairi
ENSACIG00000001939	rad54l	99	77.078	ENSEASG00005004511	RAD54L	99	77.212	Equus_asinus_asinus
ENSACIG00000001939	rad54l	99	77.450	ENSECAG00000008760	RAD54L	99	77.718	Equus_caballus
ENSACIG00000001939	rad54l	99	74.362	ENSEEUG00000008113	RAD54L	99	74.362	Erinaceus_europaeus
ENSACIG00000001939	rad54l	99	86.309	ENSELUG00000002295	rad54l	99	86.309	Esox_lucius
ENSACIG00000001939	rad54l	99	76.913	ENSFCAG00000003444	RAD54L	99	76.913	Felis_catus
ENSACIG00000001939	rad54l	99	79.542	ENSFALG00000009480	RAD54L	99	79.542	Ficedula_albicollis
ENSACIG00000001939	rad54l	99	77.987	ENSFDAG00000007806	RAD54L	99	77.987	Fukomys_damarensis
ENSACIG00000001939	rad54l	66	78.411	ENSFHEG00000009824	rad54l	83	78.411	Fundulus_heteroclitus
ENSACIG00000001939	rad54l	99	84.168	ENSGMOG00000014568	rad54l	100	84.168	Gadus_morhua
ENSACIG00000001939	rad54l	99	79.515	ENSGALG00000010356	RAD54L	92	79.515	Gallus_gallus
ENSACIG00000001939	rad54l	90	84.101	ENSGAFG00000011110	rad54l	99	84.101	Gambusia_affinis
ENSACIG00000001939	rad54l	99	88.140	ENSGACG00000003111	rad54l	98	88.140	Gasterosteus_aculeatus
ENSACIG00000001939	rad54l	99	79.439	ENSGAGG00000014089	RAD54L	97	79.439	Gopherus_agassizii
ENSACIG00000001939	rad54l	99	77.987	ENSGGOG00000010602	RAD54L	99	77.987	Gorilla_gorilla
ENSACIG00000001939	rad54l	99	91.192	ENSHBUG00000007793	rad54l	99	91.192	Haplochromis_burtoni
ENSACIG00000001939	rad54l	99	77.718	ENSHGLG00000000753	RAD54L	99	77.718	Heterocephalus_glaber_female
ENSACIG00000001939	rad54l	99	77.584	ENSHGLG00100016987	RAD54L	99	77.584	Heterocephalus_glaber_male
ENSACIG00000001939	rad54l	99	83.356	ENSIPUG00000015999	rad54l	100	85.940	Ictalurus_punctatus
ENSACIG00000001939	rad54l	99	77.315	ENSSTOG00000029125	RAD54L	99	77.315	Ictidomys_tridecemlineatus
ENSACIG00000001939	rad54l	99	64.611	ENSJJAG00000000235	-	99	64.477	Jaculus_jaculus
ENSACIG00000001939	rad54l	99	86.198	ENSKMAG00000009944	rad54l	99	86.198	Kryptolebias_marmoratus
ENSACIG00000001939	rad54l	99	88.451	ENSLBEG00000014617	rad54l	99	88.451	Labrus_bergylta
ENSACIG00000001939	rad54l	99	84.005	ENSLOCG00000004144	rad54l	99	85.714	Lepisosteus_oculatus
ENSACIG00000001939	rad54l	99	77.212	ENSLAFG00000007583	RAD54L	100	77.614	Loxodonta_africana
ENSACIG00000001939	rad54l	99	77.852	ENSMFAG00000031241	RAD54L	99	77.852	Macaca_fascicularis
ENSACIG00000001939	rad54l	99	77.852	ENSMMUG00000011568	RAD54L	99	77.852	Macaca_mulatta
ENSACIG00000001939	rad54l	99	77.852	ENSMNEG00000038562	RAD54L	99	77.852	Macaca_nemestrina
ENSACIG00000001939	rad54l	99	77.987	ENSMLEG00000038145	RAD54L	99	77.987	Mandrillus_leucophaeus
ENSACIG00000001939	rad54l	99	86.024	ENSMAMG00000022180	rad54l	99	88.183	Mastacembelus_armatus
ENSACIG00000001939	rad54l	99	90.921	ENSMZEG00005018081	rad54l	99	90.921	Maylandia_zebra
ENSACIG00000001939	rad54l	99	79.622	ENSMGAG00000010634	RAD54L	99	79.622	Meleagris_gallopavo
ENSACIG00000001939	rad54l	99	77.658	ENSMAUG00000020076	Rad54l	99	77.658	Mesocricetus_auratus
ENSACIG00000001939	rad54l	99	77.987	ENSMICG00000003266	RAD54L	99	77.987	Microcebus_murinus
ENSACIG00000001939	rad54l	99	77.927	ENSMOCG00000001778	Rad54l	99	77.927	Microtus_ochrogaster
ENSACIG00000001939	rad54l	99	84.522	ENSMALG00000021148	rad54l	100	84.522	Monopterus_albus
ENSACIG00000001939	rad54l	99	73.368	MGP_CAROLIEiJ_G0026325	Rad54l	99	73.368	Mus_caroli
ENSACIG00000001939	rad54l	99	77.315	ENSMUSG00000028702	Rad54l	99	77.315	Mus_musculus
ENSACIG00000001939	rad54l	99	77.285	MGP_PahariEiJ_G0028657	Rad54l	99	77.285	Mus_pahari
ENSACIG00000001939	rad54l	99	77.450	MGP_SPRETEiJ_G0027297	Rad54l	99	77.450	Mus_spretus
ENSACIG00000001939	rad54l	99	76.841	ENSMPUG00000012883	RAD54L	99	76.841	Mustela_putorius_furo
ENSACIG00000001939	rad54l	99	77.748	ENSMLUG00000003763	RAD54L	99	77.748	Myotis_lucifugus
ENSACIG00000001939	rad54l	99	77.419	ENSNGAG00000024213	Rad54l	99	77.419	Nannospalax_galili
ENSACIG00000001939	rad54l	99	77.852	ENSNLEG00000016548	RAD54L	99	77.852	Nomascus_leucogenys
ENSACIG00000001939	rad54l	91	77.893	ENSMEUG00000006793	RAD54L	100	77.893	Notamacropus_eugenii
ENSACIG00000001939	rad54l	90	79.791	ENSOPRG00000016016	RAD54L	90	79.791	Ochotona_princeps
ENSACIG00000001939	rad54l	99	77.718	ENSODEG00000008519	RAD54L	99	77.718	Octodon_degus
ENSACIG00000001939	rad54l	99	91.057	ENSONIG00000007659	rad54l	100	90.214	Oreochromis_niloticus
ENSACIG00000001939	rad54l	99	76.913	ENSOCUG00000005229	RAD54L	99	76.913	Oryctolagus_cuniculus
ENSACIG00000001939	rad54l	99	83.853	ENSORLG00000002958	rad54l	99	83.989	Oryzias_latipes
ENSACIG00000001939	rad54l	99	83.853	ENSORLG00020006554	rad54l	99	86.892	Oryzias_latipes_hni
ENSACIG00000001939	rad54l	99	83.967	ENSORLG00015002907	rad54l	99	83.989	Oryzias_latipes_hsok
ENSACIG00000001939	rad54l	99	83.696	ENSOMEG00000007770	rad54l	99	83.696	Oryzias_melastigma
ENSACIG00000001939	rad54l	99	77.108	ENSOARG00000002264	RAD54L	99	77.108	Ovis_aries
ENSACIG00000001939	rad54l	99	78.121	ENSPPAG00000031222	RAD54L	99	78.121	Pan_paniscus
ENSACIG00000001939	rad54l	99	76.779	ENSPPRG00000010317	RAD54L	99	76.510	Panthera_pardus
ENSACIG00000001939	rad54l	99	76.779	ENSPTIG00000012200	RAD54L	99	76.510	Panthera_tigris_altaica
ENSACIG00000001939	rad54l	99	78.121	ENSPTRG00000000689	RAD54L	99	78.121	Pan_troglodytes
ENSACIG00000001939	rad54l	99	77.987	ENSPANG00000016295	RAD54L	99	77.987	Papio_anubis
ENSACIG00000001939	rad54l	99	77.823	ENSPKIG00000016172	rad54l	99	77.823	Paramormyrops_kingsleyae
ENSACIG00000001939	rad54l	98	80.518	ENSPSIG00000003258	RAD54L	99	80.518	Pelodiscus_sinensis
ENSACIG00000001939	rad54l	99	79.675	ENSPMGG00000016335	rad54l	99	79.675	Periophthalmus_magnuspinnatus
ENSACIG00000001939	rad54l	99	77.658	ENSPEMG00000011422	Rad54l	99	77.658	Peromyscus_maniculatus_bairdii
ENSACIG00000001939	rad54l	99	69.946	ENSPMAG00000007719	rad54l	99	69.946	Petromyzon_marinus
ENSACIG00000001939	rad54l	99	78.869	ENSPCIG00000029032	RAD54L	99	78.869	Phascolarctos_cinereus
ENSACIG00000001939	rad54l	86	86.006	ENSPFOG00000013732	rad54l	100	86.006	Poecilia_formosa
ENSACIG00000001939	rad54l	82	84.578	ENSPLAG00000023416	rad54l	99	84.578	Poecilia_latipinna
ENSACIG00000001939	rad54l	91	84.421	ENSPMEG00000008299	rad54l	99	84.398	Poecilia_mexicana
ENSACIG00000001939	rad54l	99	83.897	ENSPREG00000019955	rad54l	99	83.897	Poecilia_reticulata
ENSACIG00000001939	rad54l	99	66.354	ENSPPYG00000001398	RAD54L	99	65.952	Pongo_abelii
ENSACIG00000001939	rad54l	79	77.670	ENSPCAG00000005323	RAD54L	80	77.670	Procavia_capensis
ENSACIG00000001939	rad54l	99	77.584	ENSPCOG00000015423	RAD54L	99	77.584	Propithecus_coquereli
ENSACIG00000001939	rad54l	99	85.333	ENSPNYG00000002942	rad54l	99	85.333	Pundamilia_nyererei
ENSACIG00000001939	rad54l	99	85.270	ENSPNAG00000012483	rad54l	99	85.270	Pygocentrus_nattereri
ENSACIG00000001939	rad54l	99	77.181	ENSRNOG00000013148	Rad54l	99	77.181	Rattus_norvegicus
ENSACIG00000001939	rad54l	99	77.987	ENSRBIG00000043495	RAD54L	99	77.987	Rhinopithecus_bieti
ENSACIG00000001939	rad54l	99	77.987	ENSRROG00000020844	RAD54L	99	77.987	Rhinopithecus_roxellana
ENSACIG00000001939	rad54l	80	49.845	YGL163C	RAD54	71	50.155	Saccharomyces_cerevisiae
ENSACIG00000001939	rad54l	99	78.389	ENSSBOG00000024672	RAD54L	99	78.389	Saimiri_boliviensis_boliviensis
ENSACIG00000001939	rad54l	99	78.523	ENSSHAG00000000110	RAD54L	99	78.523	Sarcophilus_harrisii
ENSACIG00000001939	rad54l	99	88.498	ENSSDUG00000019147	rad54l	99	88.498	Seriola_dumerili
ENSACIG00000001939	rad54l	99	88.769	ENSSLDG00000012330	rad54l	99	88.769	Seriola_lalandi_dorsalis
ENSACIG00000001939	rad54l	83	76.688	ENSSARG00000006689	RAD54L	99	76.688	Sorex_araneus
ENSACIG00000001939	rad54l	99	88.076	ENSSPAG00000011016	rad54l	99	88.076	Stegastes_partitus
ENSACIG00000001939	rad54l	99	77.047	ENSSSCG00000003905	RAD54L	99	77.047	Sus_scrofa
ENSACIG00000001939	rad54l	99	79.408	ENSTGUG00000008233	RAD54L	99	79.812	Taeniopygia_guttata
ENSACIG00000001939	rad54l	99	81.916	ENSTRUG00000008410	rad54l	100	81.916	Takifugu_rubripes
ENSACIG00000001939	rad54l	99	80.514	ENSTNIG00000004716	rad54l	100	80.514	Tetraodon_nigroviridis
ENSACIG00000001939	rad54l	99	71.946	ENSTTRG00000006315	RAD54L	99	71.946	Tursiops_truncatus
ENSACIG00000001939	rad54l	99	76.518	ENSUAMG00000011824	RAD54L	99	76.518	Ursus_americanus
ENSACIG00000001939	rad54l	99	75.439	ENSUMAG00000023603	RAD54L	99	75.439	Ursus_maritimus
ENSACIG00000001939	rad54l	99	77.584	ENSVVUG00000007201	RAD54L	99	77.584	Vulpes_vulpes
ENSACIG00000001939	rad54l	96	74.825	ENSXETG00000004369	rad54l	99	74.825	Xenopus_tropicalis
ENSACIG00000001939	rad54l	55	80.637	ENSXCOG00000016028	rad54l	82	83.069	Xiphophorus_couchianus