EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000002032 (Gene tree)
Gene ID: -
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein 48 (U11/U12)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 5689 bases
Position: chrCCOE01000220.1:703167-708855
Accession: ZDB-GENE-030131-4482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000002518	zf-U11-48K	PF05253.12	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000002610	-	993	-	ENSACIP00000002518	330 (aa)	-	-

Gene Model

Click here to download ENSACIG00000002032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000002032's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000002032	snrnp48	82	45.936	ENSG00000168566	SNRNP48	83	45.936	Homo_sapiens
ENSACIG00000002032	snrnp48	96	75.305	ENSAPOG00000021430	snrnp48	96	75.153	Acanthochromis_polyacanthus
ENSACIG00000002032	snrnp48	96	43.605	ENSAMEG00000017349	SNRNP48	83	46.713	Ailuropoda_melanoleuca
ENSACIG00000002032	snrnp48	96	74.924	ENSAOCG00000010562	snrnp48	96	75.077	Amphiprion_ocellaris
ENSACIG00000002032	snrnp48	96	74.618	ENSAPEG00000003231	snrnp48	96	74.769	Amphiprion_percula
ENSACIG00000002032	snrnp48	92	74.051	ENSATEG00000020210	snrnp48	94	73.968	Anabas_testudineus
ENSACIG00000002032	snrnp48	81	46.875	ENSACAG00000002811	SNRNP48	80	48.235	Anolis_carolinensis
ENSACIG00000002032	snrnp48	82	46.290	ENSANAG00000033538	SNRNP48	83	46.290	Aotus_nancymaae
ENSACIG00000002032	snrnp48	94	54.545	ENSAMXG00000015309	snrnp48	90	56.376	Astyanax_mexicanus
ENSACIG00000002032	snrnp48	91	40.841	ENSBTAG00000001123	SNRNP48	84	45.918	Bos_taurus
ENSACIG00000002032	snrnp48	82	46.975	ENSCJAG00000021330	SNRNP48	83	46.290	Callithrix_jacchus
ENSACIG00000002032	snrnp48	96	43.155	ENSCAFG00000009574	SNRNP48	69	46.127	Canis_familiaris
ENSACIG00000002032	snrnp48	96	43.155	ENSCAFG00020013203	SNRNP48	82	46.127	Canis_lupus_dingo
ENSACIG00000002032	snrnp48	96	41.739	ENSCHIG00000015216	SNRNP48	83	46.367	Capra_hircus
ENSACIG00000002032	snrnp48	79	46.909	ENSTSYG00000000698	SNRNP48	80	46.909	Carlito_syrichta
ENSACIG00000002032	snrnp48	86	44.164	ENSCAPG00000006768	SNRNP48	87	48.529	Cavia_aperea
ENSACIG00000002032	snrnp48	96	42.363	ENSCPOG00000007910	SNRNP48	88	46.026	Cavia_porcellus
ENSACIG00000002032	snrnp48	82	46.290	ENSCCAG00000035652	SNRNP48	83	46.290	Cebus_capucinus
ENSACIG00000002032	snrnp48	96	42.442	ENSCATG00000033947	SNRNP48	83	45.936	Cercocebus_atys
ENSACIG00000002032	snrnp48	98	41.311	ENSCLAG00000003765	SNRNP48	98	43.824	Chinchilla_lanigera
ENSACIG00000002032	snrnp48	82	46.290	ENSCSAG00000007409	SNRNP48	83	46.290	Chlorocebus_sabaeus
ENSACIG00000002032	snrnp48	80	43.791	ENSCPBG00000019146	SNRNP48	75	48.374	Chrysemys_picta_bellii
ENSACIG00000002032	snrnp48	82	46.290	ENSCANG00000030017	SNRNP48	83	46.290	Colobus_angolensis_palliatus
ENSACIG00000002032	snrnp48	96	41.964	ENSCGRG00001001076	-	89	44.444	Cricetulus_griseus_chok1gshd
ENSACIG00000002032	snrnp48	84	39.236	ENSCGRG00001008805	-	84	39.338	Cricetulus_griseus_chok1gshd
ENSACIG00000002032	snrnp48	96	41.964	ENSCGRG00000007781	Snrnp48	89	44.444	Cricetulus_griseus_crigri
ENSACIG00000002032	snrnp48	94	60.312	ENSCSEG00000000722	snrnp48	90	60.443	Cynoglossus_semilaevis
ENSACIG00000002032	snrnp48	92	71.019	ENSCVAG00000019829	snrnp48	77	72.910	Cyprinodon_variegatus
ENSACIG00000002032	snrnp48	93	49.845	ENSDARG00000039989	snrnp48	89	52.333	Danio_rerio
ENSACIG00000002032	snrnp48	84	45.517	ENSDNOG00000014978	SNRNP48	96	34.507	Dasypus_novemcinctus
ENSACIG00000002032	snrnp48	96	42.450	ENSDORG00000015140	Snrnp48	97	43.243	Dipodomys_ordii
ENSACIG00000002032	snrnp48	83	46.853	ENSEASG00005012021	SNRNP48	88	46.382	Equus_asinus_asinus
ENSACIG00000002032	snrnp48	83	45.965	ENSECAG00000026937	SNRNP48	88	45.545	Equus_caballus
ENSACIG00000002032	snrnp48	82	30.282	ENSEEUG00000015437	SNRNP48	88	30.769	Erinaceus_europaeus
ENSACIG00000002032	snrnp48	88	57.143	ENSELUG00000009766	snrnp48	80	58.885	Esox_lucius
ENSACIG00000002032	snrnp48	82	46.479	ENSFCAG00000018853	SNRNP48	83	46.479	Felis_catus
ENSACIG00000002032	snrnp48	68	52.966	ENSFALG00000007797	SNRNP48	85	50.000	Ficedula_albicollis
ENSACIG00000002032	snrnp48	96	41.787	ENSFDAG00000009231	SNRNP48	88	45.545	Fukomys_damarensis
ENSACIG00000002032	snrnp48	60	77.228	ENSFHEG00000014647	snrnp48	93	74.627	Fundulus_heteroclitus
ENSACIG00000002032	snrnp48	89	56.386	ENSGMOG00000018599	-	95	57.947	Gadus_morhua
ENSACIG00000002032	snrnp48	75	49.808	ENSGALG00000013005	SNRNP48	90	50.566	Gallus_gallus
ENSACIG00000002032	snrnp48	95	70.859	ENSGAFG00000021639	snrnp48	94	70.717	Gambusia_affinis
ENSACIG00000002032	snrnp48	74	71.888	ENSGACG00000017756	-	96	67.391	Gasterosteus_aculeatus
ENSACIG00000002032	snrnp48	80	45.425	ENSGAGG00000000865	SNRNP48	78	48.374	Gopherus_agassizii
ENSACIG00000002032	snrnp48	82	46.290	ENSGGOG00000013220	SNRNP48	83	46.290	Gorilla_gorilla
ENSACIG00000002032	snrnp48	93	81.013	ENSHBUG00000017066	snrnp48	92	81.013	Haplochromis_burtoni
ENSACIG00000002032	snrnp48	82	46.127	ENSHGLG00000015241	SNRNP48	88	45.695	Heterocephalus_glaber_female
ENSACIG00000002032	snrnp48	82	46.127	ENSHGLG00100010027	SNRNP48	88	45.695	Heterocephalus_glaber_male
ENSACIG00000002032	snrnp48	75	71.146	ENSHCOG00000014066	snrnp48	88	66.776	Hippocampus_comes
ENSACIG00000002032	snrnp48	82	46.831	ENSSTOG00000014635	SNRNP48	88	46.358	Ictidomys_tridecemlineatus
ENSACIG00000002032	snrnp48	82	45.936	ENSJJAG00000011495	Snrnp48	87	45.515	Jaculus_jaculus
ENSACIG00000002032	snrnp48	95	71.118	ENSKMAG00000016514	snrnp48	93	72.871	Kryptolebias_marmoratus
ENSACIG00000002032	snrnp48	95	72.360	ENSLBEG00000026249	snrnp48	93	72.240	Labrus_bergylta
ENSACIG00000002032	snrnp48	94	46.307	ENSLACG00000003958	SNRNP48	89	49.196	Latimeria_chalumnae
ENSACIG00000002032	snrnp48	81	56.028	ENSLOCG00000004187	snrnp48	82	55.830	Lepisosteus_oculatus
ENSACIG00000002032	snrnp48	84	44.983	ENSLAFG00000011152	SNRNP48	81	45.324	Loxodonta_africana
ENSACIG00000002032	snrnp48	82	46.290	ENSMFAG00000045216	SNRNP48	83	46.290	Macaca_fascicularis
ENSACIG00000002032	snrnp48	82	46.290	ENSMMUG00000014785	SNRNP48	83	46.290	Macaca_mulatta
ENSACIG00000002032	snrnp48	82	46.290	ENSMNEG00000042269	SNRNP48	83	46.290	Macaca_nemestrina
ENSACIG00000002032	snrnp48	82	46.290	ENSMLEG00000034004	SNRNP48	83	46.290	Mandrillus_leucophaeus
ENSACIG00000002032	snrnp48	95	71.384	ENSMAMG00000018673	snrnp48	82	71.246	Mastacembelus_armatus
ENSACIG00000002032	snrnp48	81	48.288	ENSMGAG00000006037	SNRNP48	97	47.782	Meleagris_gallopavo
ENSACIG00000002032	snrnp48	96	41.246	ENSMAUG00000011944	Snrnp48	89	43.564	Mesocricetus_auratus
ENSACIG00000002032	snrnp48	95	41.691	ENSMICG00000012497	SNRNP48	83	46.127	Microcebus_murinus
ENSACIG00000002032	snrnp48	96	42.308	ENSMOCG00000015555	Snrnp48	89	45.667	Microtus_ochrogaster
ENSACIG00000002032	snrnp48	55	73.158	ENSMMOG00000003072	-	60	73.158	Mola_mola
ENSACIG00000002032	snrnp48	83	45.918	ENSMODG00000009996	SNRNP48	85	44.551	Monodelphis_domestica
ENSACIG00000002032	snrnp48	95	73.209	ENSMALG00000005725	snrnp48	93	73.101	Monopterus_albus
ENSACIG00000002032	snrnp48	96	41.667	MGP_CAROLIEiJ_G0018441	Snrnp48	89	44.371	Mus_caroli
ENSACIG00000002032	snrnp48	96	41.667	ENSMUSG00000021431	Snrnp48	89	44.371	Mus_musculus
ENSACIG00000002032	snrnp48	96	42.857	MGP_PahariEiJ_G0019509	Snrnp48	89	45.695	Mus_pahari
ENSACIG00000002032	snrnp48	96	41.667	MGP_SPRETEiJ_G0019321	Snrnp48	89	44.371	Mus_spretus
ENSACIG00000002032	snrnp48	96	41.547	ENSNGAG00000004849	Snrnp48	88	45.333	Nannospalax_galili
ENSACIG00000002032	snrnp48	93	81.329	ENSNBRG00000012127	snrnp48	92	81.329	Neolamprologus_brichardi
ENSACIG00000002032	snrnp48	82	46.290	ENSNLEG00000011667	SNRNP48	83	46.290	Nomascus_leucogenys
ENSACIG00000002032	snrnp48	82	45.000	ENSOPRG00000015471	SNRNP48	92	43.960	Ochotona_princeps
ENSACIG00000002032	snrnp48	93	81.013	ENSONIG00000001520	snrnp48	92	81.013	Oreochromis_niloticus
ENSACIG00000002032	snrnp48	52	34.483	ENSOANG00000019888	-	96	35.961	Ornithorhynchus_anatinus
ENSACIG00000002032	snrnp48	78	45.318	ENSOCUG00000005168	SNRNP48	92	45.390	Oryctolagus_cuniculus
ENSACIG00000002032	snrnp48	87	75.084	ENSORLG00000015654	snrnp48	92	74.448	Oryzias_latipes
ENSACIG00000002032	snrnp48	87	72.635	ENSORLG00020015976	snrnp48	79	73.502	Oryzias_latipes_hni
ENSACIG00000002032	snrnp48	87	72.973	ENSORLG00015022379	snrnp48	79	73.817	Oryzias_latipes_hsok
ENSACIG00000002032	snrnp48	93	72.871	ENSOMEG00000022007	snrnp48	93	73.186	Oryzias_melastigma
ENSACIG00000002032	snrnp48	95	41.846	ENSOGAG00000005275	SNRNP48	97	42.424	Otolemur_garnettii
ENSACIG00000002032	snrnp48	81	45.614	ENSOARG00000017319	SNRNP48	85	50.000	Ovis_aries
ENSACIG00000002032	snrnp48	82	46.975	ENSPPAG00000032873	SNRNP48	83	46.290	Pan_paniscus
ENSACIG00000002032	snrnp48	82	47.018	ENSPPRG00000004283	SNRNP48	83	47.018	Panthera_pardus
ENSACIG00000002032	snrnp48	68	50.435	ENSPTIG00000013502	SNRNP48	79	50.435	Panthera_tigris_altaica
ENSACIG00000002032	snrnp48	82	46.975	ENSPTRG00000017703	SNRNP48	83	46.290	Pan_troglodytes
ENSACIG00000002032	snrnp48	82	46.290	ENSPANG00000000771	SNRNP48	83	46.290	Papio_anubis
ENSACIG00000002032	snrnp48	85	55.140	ENSPKIG00000013703	snrnp48	61	58.621	Paramormyrops_kingsleyae
ENSACIG00000002032	snrnp48	80	42.617	ENSPSIG00000002213	SNRNP48	76	46.939	Pelodiscus_sinensis
ENSACIG00000002032	snrnp48	76	65.251	ENSPMGG00000008120	snrnp48	92	65.251	Periophthalmus_magnuspinnatus
ENSACIG00000002032	snrnp48	96	42.730	ENSPEMG00000008872	Snrnp48	89	45.215	Peromyscus_maniculatus_bairdii
ENSACIG00000002032	snrnp48	95	70.859	ENSPFOG00000003578	snrnp48	94	70.717	Poecilia_formosa
ENSACIG00000002032	snrnp48	70	72.034	ENSPLAG00000002290	snrnp48	99	63.380	Poecilia_latipinna
ENSACIG00000002032	snrnp48	95	71.166	ENSPMEG00000018033	snrnp48	94	71.028	Poecilia_mexicana
ENSACIG00000002032	snrnp48	95	70.859	ENSPREG00000018541	snrnp48	94	71.340	Poecilia_reticulata
ENSACIG00000002032	snrnp48	82	46.643	ENSPPYG00000016209	SNRNP48	83	46.643	Pongo_abelii
ENSACIG00000002032	snrnp48	71	35.772	ENSPCAG00000011991	SNRNP48	93	36.145	Procavia_capensis
ENSACIG00000002032	snrnp48	82	45.230	ENSPVAG00000002854	SNRNP48	82	45.230	Pteropus_vampyrus
ENSACIG00000002032	snrnp48	92	81.029	ENSPNYG00000015399	snrnp48	96	80.872	Pundamilia_nyererei
ENSACIG00000002032	snrnp48	96	42.433	ENSRNOG00000013756	Snrnp48	93	44.514	Rattus_norvegicus
ENSACIG00000002032	snrnp48	82	46.290	ENSRBIG00000043856	SNRNP48	95	45.033	Rhinopithecus_bieti
ENSACIG00000002032	snrnp48	82	46.290	ENSRROG00000043229	SNRNP48	83	46.290	Rhinopithecus_roxellana
ENSACIG00000002032	snrnp48	82	46.290	ENSSBOG00000019486	SNRNP48	83	46.290	Saimiri_boliviensis_boliviensis
ENSACIG00000002032	snrnp48	81	45.704	ENSSHAG00000014483	SNRNP48	89	44.481	Sarcophilus_harrisii
ENSACIG00000002032	snrnp48	72	57.540	ENSSFOG00015006610	snrnp48	73	55.049	Scleropages_formosus
ENSACIG00000002032	snrnp48	95	74.845	ENSSDUG00000014953	snrnp48	93	74.763	Seriola_dumerili
ENSACIG00000002032	snrnp48	95	75.155	ENSSLDG00000005989	snrnp48	93	75.079	Seriola_lalandi_dorsalis
ENSACIG00000002032	snrnp48	68	50.000	ENSSPUG00000006257	SNRNP48	68	50.420	Sphenodon_punctatus
ENSACIG00000002032	snrnp48	96	74.924	ENSSPAG00000006454	snrnp48	96	75.077	Stegastes_partitus
ENSACIG00000002032	snrnp48	76	47.552	ENSTGUG00000007575	SNRNP48	77	51.440	Taeniopygia_guttata
ENSACIG00000002032	snrnp48	95	65.839	ENSTRUG00000007031	snrnp48	88	66.555	Takifugu_rubripes
ENSACIG00000002032	snrnp48	100	62.611	ENSTNIG00000012977	-	91	64.013	Tetraodon_nigroviridis
ENSACIG00000002032	snrnp48	76	46.565	ENSTBEG00000015620	SNRNP48	77	46.565	Tupaia_belangeri
ENSACIG00000002032	snrnp48	91	42.169	ENSTTRG00000016715	SNRNP48	83	46.127	Tursiops_truncatus
ENSACIG00000002032	snrnp48	96	43.881	ENSUAMG00000003690	SNRNP48	83	46.996	Ursus_americanus
ENSACIG00000002032	snrnp48	68	50.000	ENSVPAG00000003557	SNRNP48	79	50.000	Vicugna_pacos
ENSACIG00000002032	snrnp48	96	43.155	ENSVVUG00000004996	SNRNP48	82	46.127	Vulpes_vulpes
ENSACIG00000002032	snrnp48	88	42.718	ENSXETG00000020447	snrnp48	86	45.455	Xenopus_tropicalis
ENSACIG00000002032	snrnp48	95	61.755	ENSXCOG00000004478	snrnp48	93	64.151	Xiphophorus_couchianus
ENSACIG00000002032	snrnp48	95	71.037	ENSXMAG00000013595	snrnp48	94	70.717	Xiphophorus_maculatus