EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000002053 (Gene tree)
Gene ID: -
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 2010 bases
Position: chrCCOE01001453.1:284454-286463
Accession: ZDB-GENE-050417-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000002544	MRP-S27	PF10037.9	7.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000002636	-	942	-	ENSACIP00000002544	313 (aa)	-	-

Gene Model

Click here to download ENSACIG00000002053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000002053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000002053	ptcd2	100	40.974	ENSG00000049883	PTCD2	100	35.749	Homo_sapiens
ENSACIG00000002053	ptcd2	100	71.264	ENSAPOG00000020682	ptcd2	90	71.264	Acanthochromis_polyacanthus
ENSACIG00000002053	ptcd2	100	40.115	ENSAMEG00000007194	PTCD2	89	40.115	Ailuropoda_melanoleuca
ENSACIG00000002053	ptcd2	100	71.552	ENSAOCG00000006616	ptcd2	89	71.552	Amphiprion_ocellaris
ENSACIG00000002053	ptcd2	100	71.839	ENSAPEG00000022926	ptcd2	89	71.839	Amphiprion_percula
ENSACIG00000002053	ptcd2	100	46.418	ENSACAG00000009747	PTCD2	88	46.418	Anolis_carolinensis
ENSACIG00000002053	ptcd2	100	40.974	ENSANAG00000029353	PTCD2	89	40.974	Aotus_nancymaae
ENSACIG00000002053	ptcd2	100	80.460	ENSACLG00000027742	ptcd2	89	80.460	Astatotilapia_calliptera
ENSACIG00000002053	ptcd2	100	47.564	ENSAMXG00000029404	ptcd2	92	47.564	Astyanax_mexicanus
ENSACIG00000002053	ptcd2	100	42.407	ENSBTAG00000014675	PTCD2	90	42.407	Bos_taurus
ENSACIG00000002053	ptcd2	100	40.115	ENSCJAG00000016364	PTCD2	89	40.115	Callithrix_jacchus
ENSACIG00000002053	ptcd2	100	43.266	ENSCAFG00000007982	PTCD2	81	43.266	Canis_familiaris
ENSACIG00000002053	ptcd2	100	43.266	ENSCAFG00020019147	PTCD2	97	43.266	Canis_lupus_dingo
ENSACIG00000002053	ptcd2	100	42.120	ENSCHIG00000017118	PTCD2	90	42.120	Capra_hircus
ENSACIG00000002053	ptcd2	100	41.261	ENSCPOG00000040168	PTCD2	90	41.261	Cavia_porcellus
ENSACIG00000002053	ptcd2	92	41.667	ENSCCAG00000021996	-	87	42.652	Cebus_capucinus
ENSACIG00000002053	ptcd2	100	41.547	ENSCCAG00000029389	-	89	41.547	Cebus_capucinus
ENSACIG00000002053	ptcd2	100	42.120	ENSCATG00000019069	PTCD2	90	42.120	Cercocebus_atys
ENSACIG00000002053	ptcd2	100	41.547	ENSCLAG00000000072	PTCD2	90	41.547	Chinchilla_lanigera
ENSACIG00000002053	ptcd2	100	41.834	ENSCSAG00000015623	PTCD2	90	41.834	Chlorocebus_sabaeus
ENSACIG00000002053	ptcd2	79	49.412	ENSCHOG00000010634	PTCD2	79	49.412	Choloepus_hoffmanni
ENSACIG00000002053	ptcd2	100	43.840	ENSCPBG00000000216	PTCD2	88	43.840	Chrysemys_picta_bellii
ENSACIG00000002053	ptcd2	100	41.834	ENSCANG00000035636	PTCD2	89	41.834	Colobus_angolensis_palliatus
ENSACIG00000002053	ptcd2	100	43.553	ENSCGRG00001015289	Ptcd2	76	43.553	Cricetulus_griseus_chok1gshd
ENSACIG00000002053	ptcd2	100	43.553	ENSCGRG00000006193	Ptcd2	76	43.553	Cricetulus_griseus_crigri
ENSACIG00000002053	ptcd2	100	68.391	ENSCVAG00000001285	ptcd2	88	68.391	Cyprinodon_variegatus
ENSACIG00000002053	ptcd2	100	49.856	ENSDARG00000035391	ptcd2	90	49.856	Danio_rerio
ENSACIG00000002053	ptcd2	100	41.834	ENSDNOG00000008719	PTCD2	90	41.834	Dasypus_novemcinctus
ENSACIG00000002053	ptcd2	100	41.834	ENSDORG00000004921	Ptcd2	89	41.834	Dipodomys_ordii
ENSACIG00000002053	ptcd2	100	40.462	ENSETEG00000016542	PTCD2	89	40.462	Echinops_telfairi
ENSACIG00000002053	ptcd2	100	42.693	ENSEASG00005018038	PTCD2	90	42.693	Equus_asinus_asinus
ENSACIG00000002053	ptcd2	100	42.693	ENSECAG00000007022	PTCD2	89	42.693	Equus_caballus
ENSACIG00000002053	ptcd2	100	42.571	ENSEEUG00000014031	PTCD2	89	42.571	Erinaceus_europaeus
ENSACIG00000002053	ptcd2	100	57.307	ENSELUG00000003584	ptcd2	90	57.307	Esox_lucius
ENSACIG00000002053	ptcd2	94	44.164	ENSFCAG00000045432	PTCD2	73	44.164	Felis_catus
ENSACIG00000002053	ptcd2	95	43.438	ENSFALG00000010299	PTCD2	96	43.438	Ficedula_albicollis
ENSACIG00000002053	ptcd2	100	40.974	ENSFDAG00000018461	PTCD2	90	40.974	Fukomys_damarensis
ENSACIG00000002053	ptcd2	100	58.120	ENSGMOG00000003637	ptcd2	90	58.120	Gadus_morhua
ENSACIG00000002053	ptcd2	100	42.693	ENSGALG00000038260	PTCD2	91	42.693	Gallus_gallus
ENSACIG00000002053	ptcd2	100	46.418	ENSGAGG00000021952	PTCD2	88	46.418	Gopherus_agassizii
ENSACIG00000002053	ptcd2	100	40.974	ENSGGOG00000010695	PTCD2	89	40.974	Gorilla_gorilla
ENSACIG00000002053	ptcd2	100	80.747	ENSHBUG00000009191	ptcd2	89	80.747	Haplochromis_burtoni
ENSACIG00000002053	ptcd2	100	42.407	ENSHGLG00000001234	PTCD2	90	42.407	Heterocephalus_glaber_female
ENSACIG00000002053	ptcd2	100	42.407	ENSHGLG00100015419	PTCD2	90	42.407	Heterocephalus_glaber_male
ENSACIG00000002053	ptcd2	100	65.616	ENSHCOG00000001703	ptcd2	90	65.616	Hippocampus_comes
ENSACIG00000002053	ptcd2	92	52.632	ENSIPUG00000006080	ptcd2	89	51.734	Ictalurus_punctatus
ENSACIG00000002053	ptcd2	100	40.286	ENSSTOG00000006596	PTCD2	90	40.286	Ictidomys_tridecemlineatus
ENSACIG00000002053	ptcd2	100	43.714	ENSJJAG00000024388	Ptcd2	90	43.714	Jaculus_jaculus
ENSACIG00000002053	ptcd2	98	56.140	ENSKMAG00000009329	ptcd2	89	56.140	Kryptolebias_marmoratus
ENSACIG00000002053	ptcd2	100	66.667	ENSLBEG00000024871	ptcd2	88	66.667	Labrus_bergylta
ENSACIG00000002053	ptcd2	100	50.286	ENSLOCG00000011122	ptcd2	90	51.143	Lepisosteus_oculatus
ENSACIG00000002053	ptcd2	81	46.350	ENSLAFG00000004115	PTCD2	87	46.350	Loxodonta_africana
ENSACIG00000002053	ptcd2	100	42.693	ENSMFAG00000031516	PTCD2	89	42.693	Macaca_fascicularis
ENSACIG00000002053	ptcd2	100	42.407	ENSMNEG00000007537	PTCD2	90	42.407	Macaca_nemestrina
ENSACIG00000002053	ptcd2	100	42.120	ENSMLEG00000031093	PTCD2	89	42.120	Mandrillus_leucophaeus
ENSACIG00000002053	ptcd2	100	70.977	ENSMAMG00000018529	ptcd2	90	70.977	Mastacembelus_armatus
ENSACIG00000002053	ptcd2	100	80.460	ENSMZEG00005003625	ptcd2	89	80.460	Maylandia_zebra
ENSACIG00000002053	ptcd2	100	42.693	ENSMGAG00000005033	PTCD2	99	42.693	Meleagris_gallopavo
ENSACIG00000002053	ptcd2	100	51.176	ENSMAUG00000020253	Ptcd2	89	37.427	Mesocricetus_auratus
ENSACIG00000002053	ptcd2	100	42.120	ENSMICG00000004535	PTCD2	89	42.120	Microcebus_murinus
ENSACIG00000002053	ptcd2	100	43.266	ENSMOCG00000019985	Ptcd2	91	43.266	Microtus_ochrogaster
ENSACIG00000002053	ptcd2	100	43.553	ENSMODG00000001695	PTCD2	90	43.553	Monodelphis_domestica
ENSACIG00000002053	ptcd2	100	68.966	ENSMALG00000022372	ptcd2	90	68.966	Monopterus_albus
ENSACIG00000002053	ptcd2	100	42.120	MGP_CAROLIEiJ_G0018829	Ptcd2	91	42.120	Mus_caroli
ENSACIG00000002053	ptcd2	100	41.547	ENSMUSG00000021650	Ptcd2	91	41.547	Mus_musculus
ENSACIG00000002053	ptcd2	100	42.407	MGP_PahariEiJ_G0015904	Ptcd2	91	42.407	Mus_pahari
ENSACIG00000002053	ptcd2	100	42.120	MGP_SPRETEiJ_G0019711	Ptcd2	91	42.120	Mus_spretus
ENSACIG00000002053	ptcd2	100	41.547	ENSMPUG00000014401	PTCD2	90	41.547	Mustela_putorius_furo
ENSACIG00000002053	ptcd2	100	41.547	ENSMLUG00000007374	PTCD2	89	41.547	Myotis_lucifugus
ENSACIG00000002053	ptcd2	100	40.401	ENSNGAG00000005027	Ptcd2	90	40.401	Nannospalax_galili
ENSACIG00000002053	ptcd2	100	79.885	ENSNBRG00000008174	ptcd2	90	79.885	Neolamprologus_brichardi
ENSACIG00000002053	ptcd2	94	84.868	ENSNBRG00000000092	-	95	84.868	Neolamprologus_brichardi
ENSACIG00000002053	ptcd2	100	40.401	ENSNLEG00000004516	PTCD2	89	40.401	Nomascus_leucogenys
ENSACIG00000002053	ptcd2	70	57.233	ENSMEUG00000014012	-	61	54.070	Notamacropus_eugenii
ENSACIG00000002053	ptcd2	100	40.974	ENSOPRG00000007290	PTCD2	89	40.974	Ochotona_princeps
ENSACIG00000002053	ptcd2	100	43.266	ENSODEG00000016417	PTCD2	90	43.266	Octodon_degus
ENSACIG00000002053	ptcd2	81	83.577	ENSONIG00000011269	ptcd2	79	83.577	Oreochromis_niloticus
ENSACIG00000002053	ptcd2	100	42.120	ENSOCUG00000007970	PTCD2	90	42.120	Oryctolagus_cuniculus
ENSACIG00000002053	ptcd2	100	66.092	ENSORLG00000003851	ptcd2	88	66.092	Oryzias_latipes
ENSACIG00000002053	ptcd2	100	65.517	ENSORLG00020009823	ptcd2	90	65.517	Oryzias_latipes_hni
ENSACIG00000002053	ptcd2	100	65.015	ENSORLG00015016777	ptcd2	98	65.015	Oryzias_latipes_hsok
ENSACIG00000002053	ptcd2	100	66.379	ENSOMEG00000012396	ptcd2	84	66.379	Oryzias_melastigma
ENSACIG00000002053	ptcd2	100	42.980	ENSOGAG00000008390	PTCD2	89	42.980	Otolemur_garnettii
ENSACIG00000002053	ptcd2	100	42.407	ENSOARG00000005087	PTCD2	89	42.407	Ovis_aries
ENSACIG00000002053	ptcd2	100	40.974	ENSPPAG00000028480	PTCD2	89	40.974	Pan_paniscus
ENSACIG00000002053	ptcd2	100	40.688	ENSPTRG00000016968	PTCD2	89	40.688	Pan_troglodytes
ENSACIG00000002053	ptcd2	100	42.407	ENSPANG00000006611	PTCD2	89	42.407	Papio_anubis
ENSACIG00000002053	ptcd2	100	54.728	ENSPKIG00000019896	ptcd2	90	54.728	Paramormyrops_kingsleyae
ENSACIG00000002053	ptcd2	89	47.138	ENSPSIG00000014559	PTCD2	90	47.138	Pelodiscus_sinensis
ENSACIG00000002053	ptcd2	100	44.160	ENSPEMG00000000884	Ptcd2	91	44.160	Peromyscus_maniculatus_bairdii
ENSACIG00000002053	ptcd2	100	42.693	ENSPCIG00000029047	PTCD2	90	42.693	Phascolarctos_cinereus
ENSACIG00000002053	ptcd2	100	66.954	ENSPLAG00000010456	ptcd2	90	66.954	Poecilia_latipinna
ENSACIG00000002053	ptcd2	100	67.241	ENSPREG00000021797	ptcd2	88	67.241	Poecilia_reticulata
ENSACIG00000002053	ptcd2	100	37.389	ENSPPYG00000015543	PTCD2	88	37.389	Pongo_abelii
ENSACIG00000002053	ptcd2	62	48.000	ENSPCAG00000006806	PTCD2	62	48.000	Procavia_capensis
ENSACIG00000002053	ptcd2	100	42.241	ENSPVAG00000010935	PTCD2	89	42.241	Pteropus_vampyrus
ENSACIG00000002053	ptcd2	100	80.172	ENSPNYG00000003122	ptcd2	89	80.172	Pundamilia_nyererei
ENSACIG00000002053	ptcd2	100	57.550	ENSPNAG00000021490	ptcd2	90	58.405	Pygocentrus_nattereri
ENSACIG00000002053	ptcd2	100	42.980	ENSRNOG00000028403	Ptcd2	91	42.980	Rattus_norvegicus
ENSACIG00000002053	ptcd2	100	38.109	ENSRBIG00000032929	PTCD2	88	38.109	Rhinopithecus_bieti
ENSACIG00000002053	ptcd2	100	42.120	ENSRROG00000000080	PTCD2	90	42.120	Rhinopithecus_roxellana
ENSACIG00000002053	ptcd2	100	40.401	ENSSBOG00000018911	PTCD2	90	40.401	Saimiri_boliviensis_boliviensis
ENSACIG00000002053	ptcd2	100	40.688	ENSSHAG00000003833	PTCD2	89	40.688	Sarcophilus_harrisii
ENSACIG00000002053	ptcd2	100	52.299	ENSSFOG00015015415	ptcd2	90	52.299	Scleropages_formosus
ENSACIG00000002053	ptcd2	100	63.218	ENSSMAG00000010350	ptcd2	90	63.218	Scophthalmus_maximus
ENSACIG00000002053	ptcd2	100	70.115	ENSSDUG00000008142	ptcd2	86	70.115	Seriola_dumerili
ENSACIG00000002053	ptcd2	100	70.115	ENSSLDG00000015284	ptcd2	90	70.115	Seriola_lalandi_dorsalis
ENSACIG00000002053	ptcd2	81	38.433	ENSSARG00000004983	PTCD2	86	38.433	Sorex_araneus
ENSACIG00000002053	ptcd2	100	43.266	ENSSPUG00000000176	PTCD2	87	43.266	Sphenodon_punctatus
ENSACIG00000002053	ptcd2	100	63.506	ENSSPAG00000008591	ptcd2	89	63.506	Stegastes_partitus
ENSACIG00000002053	ptcd2	100	42.693	ENSSSCG00000016975	PTCD2	80	43.887	Sus_scrofa
ENSACIG00000002053	ptcd2	99	43.804	ENSTGUG00000005705	PTCD2	99	43.804	Taeniopygia_guttata
ENSACIG00000002053	ptcd2	100	40.974	ENSTBEG00000016559	PTCD2	89	40.974	Tupaia_belangeri
ENSACIG00000002053	ptcd2	100	43.678	ENSTTRG00000011851	PTCD2	89	43.678	Tursiops_truncatus
ENSACIG00000002053	ptcd2	100	40.401	ENSUAMG00000007583	PTCD2	81	40.401	Ursus_americanus
ENSACIG00000002053	ptcd2	100	40.401	ENSUMAG00000007666	PTCD2	90	40.401	Ursus_maritimus
ENSACIG00000002053	ptcd2	100	41.547	ENSVPAG00000009597	PTCD2	89	41.547	Vicugna_pacos
ENSACIG00000002053	ptcd2	100	42.693	ENSVVUG00000007299	-	97	40.000	Vulpes_vulpes
ENSACIG00000002053	ptcd2	100	42.286	ENSXETG00000031652	PTCD2	91	42.286	Xenopus_tropicalis
ENSACIG00000002053	ptcd2	100	66.954	ENSXMAG00000005940	ptcd2	82	66.954	Xiphophorus_maculatus