EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000002171 (Gene tree)
Gene ID: -
Gene Symbol: srrm4
Alias: ZnSR100|im:7136231|si:dkey-1k23.1
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 57145 bases
Position: chrCCOE01000077.1:212159-269303
Accession: ZDB-GENE-050208-34
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000002681	SRRM_C	PF15230.6	5.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000002778	-	1272	-	ENSACIP00000002681	423 (aa)	-	-

Gene Model

Click here to download ENSACIG00000002171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000002171's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000002171	srrm4	94	67.073	ENSATEG00000005330	srrm4	100	67.143	Anabas_testudineus
ENSACIG00000002171	srrm4	92	79.254	ENSACLG00000023532	srrm4	98	78.322	Astatotilapia_calliptera
ENSACIG00000002171	srrm4	90	55.446	ENSCSEG00000007689	-	88	52.473	Cynoglossus_semilaevis
ENSACIG00000002171	srrm4	65	89.474	ENSELUG00000004986	srrm4	66	69.643	Esox_lucius
ENSACIG00000002171	srrm4	75	67.069	ENSFHEG00000005091	srrm4	87	64.350	Fundulus_heteroclitus
ENSACIG00000002171	srrm4	59	46.918	ENSGMOG00000006714	srrm4	56	48.551	Gadus_morhua
ENSACIG00000002171	srrm4	90	88.235	ENSHBUG00000010505	srrm4	68	88.235	Haplochromis_burtoni
ENSACIG00000002171	srrm4	95	67.757	ENSMAMG00000004280	srrm4	99	63.318	Mastacembelus_armatus
ENSACIG00000002171	srrm4	92	79.254	ENSMZEG00005021733	srrm4	98	78.322	Maylandia_zebra
ENSACIG00000002171	srrm4	78	77.215	ENSMALG00000001422	srrm4	63	77.215	Monopterus_albus
ENSACIG00000002171	srrm4	92	68.803	ENSNBRG00000015313	srrm4	98	70.085	Neolamprologus_brichardi
ENSACIG00000002171	srrm4	74	76.124	ENSONIG00000010552	srrm4	68	88.235	Oreochromis_niloticus
ENSACIG00000002171	srrm4	83	72.180	ENSORLG00020009749	srrm4	89	49.265	Oryzias_latipes_hni
ENSACIG00000002171	srrm4	95	54.060	ENSPMGG00000008387	srrm4	85	51.451	Periophthalmus_magnuspinnatus
ENSACIG00000002171	srrm4	93	63.232	ENSPLAG00000002006	srrm4	99	59.765	Poecilia_latipinna
ENSACIG00000002171	srrm4	93	63.380	ENSPREG00000004567	srrm4	99	59.629	Poecilia_reticulata
ENSACIG00000002171	srrm4	92	78.111	ENSPNYG00000007785	srrm4	98	76.959	Pundamilia_nyererei
ENSACIG00000002171	srrm4	93	58.784	ENSSMAG00000012257	srrm4	70	68.750	Scophthalmus_maximus
ENSACIG00000002171	srrm4	94	68.090	ENSSDUG00000017519	srrm4	99	67.890	Seriola_dumerili
ENSACIG00000002171	srrm4	96	65.198	ENSSLDG00000015130	srrm4	99	65.256	Seriola_lalandi_dorsalis
ENSACIG00000002171	srrm4	94	65.885	ENSSPAG00000016190	srrm4	99	71.687	Stegastes_partitus
ENSACIG00000002171	srrm4	92	74.324	ENSXMAG00000002658	srrm4	67	74.324	Xiphophorus_maculatus