EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000002467 (Gene tree)
Gene ID: -
Gene Symbol: nop53
Alias: fb60b03|gltscr2|wu:fb60b03|zgc:123178
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 8050 bases
Position: chrCCOE01000293.1:294153-302202
Accession: ZDB-GENE-051120-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000003205	Nop53	PF07767.11	3.8e-65	1	1
ENSACIP00000003160	Nop53	PF07767.11	8.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000003315	-	1008	-	ENSACIP00000003205	335 (aa)	-	-
ENSACIT00000003270	-	1035	-	ENSACIP00000003160	344 (aa)	-	-

Gene Model

Click here to download ENSACIG00000002467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000002467's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000002467	nop53	98	46.910	ENSG00000105373	NOP53	97	68.675	Homo_sapiens
ENSACIG00000002467	nop53	98	72.434	ENSAPOG00000006446	nop53	74	72.727	Acanthochromis_polyacanthus
ENSACIG00000002467	nop53	98	43.011	ENSAMEG00000015214	NOP53	74	40.318	Ailuropoda_melanoleuca
ENSACIG00000002467	nop53	98	74.194	ENSAOCG00000007002	nop53	74	74.780	Amphiprion_ocellaris
ENSACIG00000002467	nop53	98	75.073	ENSAPEG00000024564	nop53	74	75.660	Amphiprion_percula
ENSACIG00000002467	nop53	93	74.383	ENSATEG00000021860	nop53	73	74.691	Anabas_testudineus
ENSACIG00000002467	nop53	74	53.846	ENSACAG00000011362	-	93	53.114	Anolis_carolinensis
ENSACIG00000002467	nop53	98	43.258	ENSANAG00000007933	NOP53	78	42.697	Aotus_nancymaae
ENSACIG00000002467	nop53	96	82.090	ENSACLG00000011832	nop53	72	82.687	Astatotilapia_calliptera
ENSACIG00000002467	nop53	99	56.286	ENSAMXG00000014883	nop53	75	56.571	Astyanax_mexicanus
ENSACIG00000002467	nop53	98	46.133	ENSBTAG00000021192	NOP53	67	43.923	Bos_taurus
ENSACIG00000002467	nop53	98	46.111	ENSCJAG00000011385	NOP53	74	45.556	Callithrix_jacchus
ENSACIG00000002467	nop53	98	46.006	ENSCAFG00000004080	NOP53	74	45.730	Canis_familiaris
ENSACIG00000002467	nop53	98	47.765	ENSCHIG00000009393	NOP53	74	45.531	Capra_hircus
ENSACIG00000002467	nop53	98	41.573	ENSTSYG00000036631	NOP53	72	39.942	Carlito_syrichta
ENSACIG00000002467	nop53	98	46.218	ENSCAPG00000013148	NOP53	89	46.218	Cavia_aperea
ENSACIG00000002467	nop53	98	45.938	ENSCPOG00000015665	NOP53	74	45.938	Cavia_porcellus
ENSACIG00000002467	nop53	98	46.348	ENSCCAG00000025477	NOP53	73	46.067	Cebus_capucinus
ENSACIG00000002467	nop53	98	46.348	ENSCATG00000032842	NOP53	73	44.944	Cercocebus_atys
ENSACIG00000002467	nop53	98	45.278	ENSCLAG00000001860	NOP53	74	44.722	Chinchilla_lanigera
ENSACIG00000002467	nop53	98	46.067	ENSCSAG00000002928	NOP53	73	44.944	Chlorocebus_sabaeus
ENSACIG00000002467	nop53	99	48.045	ENSCPBG00000009047	NOP53	85	48.045	Chrysemys_picta_bellii
ENSACIG00000002467	nop53	77	37.324	ENSCING00000021395	-	69	37.324	Ciona_intestinalis
ENSACIG00000002467	nop53	77	37.589	ENSCSAVG00000006009	-	68	39.085	Ciona_savignyi
ENSACIG00000002467	nop53	98	43.804	ENSCANG00000039648	NOP53	71	43.020	Colobus_angolensis_palliatus
ENSACIG00000002467	nop53	98	46.111	ENSCGRG00001019033	Nop53	74	43.611	Cricetulus_griseus_chok1gshd
ENSACIG00000002467	nop53	98	69.027	ENSCSEG00000014834	nop53	74	69.027	Cynoglossus_semilaevis
ENSACIG00000002467	nop53	98	74.203	ENSCVAG00000005940	nop53	74	74.709	Cyprinodon_variegatus
ENSACIG00000002467	nop53	99	62.682	ENSDARG00000100452	nop53	86	68.387	Danio_rerio
ENSACIG00000002467	nop53	98	46.629	ENSDNOG00000005165	NOP53	67	45.506	Dasypus_novemcinctus
ENSACIG00000002467	nop53	99	40.113	ENSEBUG00000012747	nop53	76	39.548	Eptatretus_burgeri
ENSACIG00000002467	nop53	98	43.750	ENSEASG00005004345	NOP53	70	45.531	Equus_asinus_asinus
ENSACIG00000002467	nop53	98	43.164	ENSECAG00000026850	NOP53	71	44.904	Equus_caballus
ENSACIG00000002467	nop53	98	61.243	ENSELUG00000001525	nop53	74	61.834	Esox_lucius
ENSACIG00000002467	nop53	98	44.628	ENSFCAG00000010861	NOP53	74	42.975	Felis_catus
ENSACIG00000002467	nop53	98	43.323	ENSFDAG00000010478	NOP53	70	43.440	Fukomys_damarensis
ENSACIG00000002467	nop53	98	74.487	ENSFHEG00000017763	nop53	72	74.780	Fundulus_heteroclitus
ENSACIG00000002467	nop53	99	64.545	ENSGMOG00000014299	nop53	75	64.545	Gadus_morhua
ENSACIG00000002467	nop53	99	48.066	ENSGALG00000039473	NOP53	61	47.514	Gallus_gallus
ENSACIG00000002467	nop53	99	73.837	ENSGAFG00000013301	nop53	77	74.336	Gambusia_affinis
ENSACIG00000002467	nop53	98	69.909	ENSGACG00000005766	nop53	73	69.909	Gasterosteus_aculeatus
ENSACIG00000002467	nop53	98	46.067	ENSGGOG00000005462	NOP53	76	44.944	Gorilla_gorilla
ENSACIG00000002467	nop53	98	44.633	ENSGGOG00000024728	-	76	43.785	Gorilla_gorilla
ENSACIG00000002467	nop53	96	82.090	ENSHBUG00000023625	nop53	76	82.687	Haplochromis_burtoni
ENSACIG00000002467	nop53	98	46.518	ENSHGLG00000018240	NOP53	74	45.404	Heterocephalus_glaber_female
ENSACIG00000002467	nop53	71	59.821	ENSHGLG00100015613	NOP53	63	60.377	Heterocephalus_glaber_male
ENSACIG00000002467	nop53	97	67.697	ENSHCOG00000017133	nop53	74	67.978	Hippocampus_comes
ENSACIG00000002467	nop53	99	60.704	ENSIPUG00000008154	nop53	66	61.584	Ictalurus_punctatus
ENSACIG00000002467	nop53	98	46.629	ENSSTOG00000022092	NOP53	74	45.225	Ictidomys_tridecemlineatus
ENSACIG00000002467	nop53	98	43.733	ENSJJAG00000007854	Nop53	74	43.733	Jaculus_jaculus
ENSACIG00000002467	nop53	93	73.292	ENSKMAG00000020756	nop53	73	73.602	Kryptolebias_marmoratus
ENSACIG00000002467	nop53	98	71.176	ENSLBEG00000011432	nop53	74	71.471	Labrus_bergylta
ENSACIG00000002467	nop53	99	49.020	ENSLACG00000018320	NOP53	89	48.459	Latimeria_chalumnae
ENSACIG00000002467	nop53	99	56.322	ENSLOCG00000014178	nop53	76	56.812	Lepisosteus_oculatus
ENSACIG00000002467	nop53	98	46.910	ENSMFAG00000045103	NOP53	73	45.506	Macaca_fascicularis
ENSACIG00000002467	nop53	98	46.348	ENSMMUG00000013348	NOP53	96	63.736	Macaca_mulatta
ENSACIG00000002467	nop53	98	46.910	ENSMNEG00000042540	NOP53	71	45.506	Macaca_nemestrina
ENSACIG00000002467	nop53	98	41.808	ENSMLEG00000032475	NOP53	72	40.580	Mandrillus_leucophaeus
ENSACIG00000002467	nop53	98	73.256	ENSMAMG00000012652	nop53	74	73.837	Mastacembelus_armatus
ENSACIG00000002467	nop53	96	82.090	ENSMZEG00005005033	nop53	78	82.687	Maylandia_zebra
ENSACIG00000002467	nop53	98	45.810	ENSMAUG00000012617	Nop53	74	44.413	Mesocricetus_auratus
ENSACIG00000002467	nop53	98	47.339	ENSMICG00000005580	NOP53	77	45.098	Microcebus_murinus
ENSACIG00000002467	nop53	98	47.887	ENSMOCG00000008367	Nop53	73	46.328	Microtus_ochrogaster
ENSACIG00000002467	nop53	98	72.810	ENSMMOG00000006515	nop53	74	72.107	Mola_mola
ENSACIG00000002467	nop53	98	48.571	ENSMODG00000008721	NOP53	69	47.429	Monodelphis_domestica
ENSACIG00000002467	nop53	98	73.529	ENSMALG00000020350	nop53	76	73.874	Monopterus_albus
ENSACIG00000002467	nop53	98	45.028	MGP_CAROLIEiJ_G0029218	Nop53	80	54.000	Mus_caroli
ENSACIG00000002467	nop53	98	45.304	ENSMUSG00000041560	Nop53	74	45.304	Mus_musculus
ENSACIG00000002467	nop53	98	46.133	MGP_PahariEiJ_G0021074	-	80	54.000	Mus_pahari
ENSACIG00000002467	nop53	98	46.409	MGP_SPRETEiJ_G0030298	Nop53	80	54.000	Mus_spretus
ENSACIG00000002467	nop53	98	45.730	ENSMPUG00000004456	NOP53	74	45.455	Mustela_putorius_furo
ENSACIG00000002467	nop53	70	56.693	ENSMLUG00000027066	-	99	46.992	Myotis_lucifugus
ENSACIG00000002467	nop53	98	47.701	ENSNGAG00000019894	Nop53	73	46.991	Nannospalax_galili
ENSACIG00000002467	nop53	90	77.460	ENSNBRG00000002057	nop53	70	78.594	Neolamprologus_brichardi
ENSACIG00000002467	nop53	94	38.806	ENSNLEG00000028326	-	80	36.716	Nomascus_leucogenys
ENSACIG00000002467	nop53	98	47.191	ENSNLEG00000003143	NOP53	73	45.787	Nomascus_leucogenys
ENSACIG00000002467	nop53	98	42.136	ENSMEUG00000002525	-	96	42.136	Notamacropus_eugenii
ENSACIG00000002467	nop53	98	43.889	ENSODEG00000006707	NOP53	74	43.056	Octodon_degus
ENSACIG00000002467	nop53	96	83.631	ENSONIG00000016624	nop53	72	84.821	Oreochromis_niloticus
ENSACIG00000002467	nop53	98	71.261	ENSORLG00000008659	nop53	75	70.674	Oryzias_latipes
ENSACIG00000002467	nop53	96	72.372	ENSORLG00020019916	nop53	74	71.772	Oryzias_latipes_hni
ENSACIG00000002467	nop53	98	71.930	ENSORLG00015001315	nop53	74	71.930	Oryzias_latipes_hsok
ENSACIG00000002467	nop53	98	71.802	ENSOMEG00000018244	nop53	74	71.802	Oryzias_melastigma
ENSACIG00000002467	nop53	98	70.149	ENSOGAG00000024300	NOP53	77	38.995	Otolemur_garnettii
ENSACIG00000002467	nop53	98	42.899	ENSPPAG00000032995	-	74	42.604	Pan_paniscus
ENSACIG00000002467	nop53	98	44.663	ENSPPAG00000002927	-	73	43.539	Pan_paniscus
ENSACIG00000002467	nop53	98	43.503	ENSPPAG00000029337	-	76	41.243	Pan_paniscus
ENSACIG00000002467	nop53	98	44.628	ENSPPRG00000008954	NOP53	74	44.353	Panthera_pardus
ENSACIG00000002467	nop53	98	44.126	ENSPTRG00000043520	-	73	43.391	Pan_troglodytes
ENSACIG00000002467	nop53	98	46.348	ENSPTRG00000011215	NOP53	73	45.225	Pan_troglodytes
ENSACIG00000002467	nop53	98	43.220	ENSPTRG00000052493	-	76	40.960	Pan_troglodytes
ENSACIG00000002467	nop53	98	46.629	ENSPANG00000002964	NOP53	73	45.506	Papio_anubis
ENSACIG00000002467	nop53	98	56.936	ENSPKIG00000000127	nop53	74	58.824	Paramormyrops_kingsleyae
ENSACIG00000002467	nop53	98	70.029	ENSPMGG00000021579	nop53	76	70.029	Periophthalmus_magnuspinnatus
ENSACIG00000002467	nop53	98	47.222	ENSPEMG00000006856	Nop53	74	45.833	Peromyscus_maniculatus_bairdii
ENSACIG00000002467	nop53	98	46.154	ENSPCIG00000016718	NOP53	75	45.869	Phascolarctos_cinereus
ENSACIG00000002467	nop53	99	73.775	ENSPFOG00000002839	nop53	74	73.775	Poecilia_formosa
ENSACIG00000002467	nop53	99	73.775	ENSPLAG00000006675	nop53	74	73.775	Poecilia_latipinna
ENSACIG00000002467	nop53	99	74.203	ENSPMEG00000009589	nop53	74	74.493	Poecilia_mexicana
ENSACIG00000002467	nop53	99	70.091	ENSPREG00000008711	nop53	74	69.486	Poecilia_reticulata
ENSACIG00000002467	nop53	98	42.978	ENSPPYG00000010181	NOP53	71	41.618	Pongo_abelii
ENSACIG00000002467	nop53	98	47.191	ENSPCAG00000007692	NOP53	75	45.225	Procavia_capensis
ENSACIG00000002467	nop53	98	41.246	ENSPCOG00000016124	NOP53	70	43.620	Propithecus_coquereli
ENSACIG00000002467	nop53	70	47.909	ENSPVAG00000014671	NOP53	54	45.247	Pteropus_vampyrus
ENSACIG00000002467	nop53	96	81.791	ENSPNYG00000001341	nop53	72	82.388	Pundamilia_nyererei
ENSACIG00000002467	nop53	96	60.479	ENSPNAG00000012520	nop53	75	60.641	Pygocentrus_nattereri
ENSACIG00000002467	nop53	98	47.500	ENSRNOG00000013023	Nop53	74	45.278	Rattus_norvegicus
ENSACIG00000002467	nop53	98	46.910	ENSRBIG00000036427	NOP53	73	45.787	Rhinopithecus_bieti
ENSACIG00000002467	nop53	98	46.910	ENSRROG00000042298	NOP53	74	45.787	Rhinopithecus_roxellana
ENSACIG00000002467	nop53	98	46.629	ENSSBOG00000033115	NOP53	73	45.225	Saimiri_boliviensis_boliviensis
ENSACIG00000002467	nop53	98	47.009	ENSSHAG00000002239	NOP53	86	43.490	Sarcophilus_harrisii
ENSACIG00000002467	nop53	98	57.353	ENSSFOG00015007062	gltscr2	75	57.941	Scleropages_formosus
ENSACIG00000002467	nop53	98	68.406	ENSSMAG00000000212	nop53	75	69.275	Scophthalmus_maximus
ENSACIG00000002467	nop53	98	73.824	ENSSDUG00000010575	nop53	74	74.412	Seriola_dumerili
ENSACIG00000002467	nop53	98	73.235	ENSSLDG00000000140	nop53	74	73.824	Seriola_lalandi_dorsalis
ENSACIG00000002467	nop53	96	47.093	ENSSARG00000014109	NOP53	72	45.349	Sorex_araneus
ENSACIG00000002467	nop53	99	43.314	ENSSPUG00000004420	NOP53	78	42.286	Sphenodon_punctatus
ENSACIG00000002467	nop53	98	73.469	ENSSPAG00000000318	nop53	80	74.052	Stegastes_partitus
ENSACIG00000002467	nop53	98	46.307	ENSSSCG00000022774	NOP53	73	44.886	Sus_scrofa
ENSACIG00000002467	nop53	98	71.848	ENSTRUG00000004944	nop53	74	72.434	Takifugu_rubripes
ENSACIG00000002467	nop53	98	46.832	ENSTTRG00000011831	NOP53	74	44.628	Tursiops_truncatus
ENSACIG00000002467	nop53	98	44.384	ENSUAMG00000028254	NOP53	73	41.873	Ursus_americanus
ENSACIG00000002467	nop53	90	60.714	ENSXETG00000002782	nop53	75	46.746	Xenopus_tropicalis
ENSACIG00000002467	nop53	99	72.303	ENSXCOG00000004436	nop53	75	72.303	Xiphophorus_couchianus
ENSACIG00000002467	nop53	99	73.178	ENSXMAG00000002589	nop53	77	73.373	Xiphophorus_maculatus