EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000002577 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 7767 bases
Position: chrCCOE01000440.1:1004361-1012127
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000003311	KH_1	PF00013.29	2.6e-50	1	3
ENSACIP00000003311	KH_1	PF00013.29	2.6e-50	2	3
ENSACIP00000003311	KH_1	PF00013.29	2.6e-50	3	3
ENSACIP00000003341	KH_1	PF00013.29	3.6e-50	1	3
ENSACIP00000003341	KH_1	PF00013.29	3.6e-50	2	3
ENSACIP00000003341	KH_1	PF00013.29	3.6e-50	3	3
ENSACIP00000003354	KH_1	PF00013.29	6.3e-32	1	2
ENSACIP00000003354	KH_1	PF00013.29	6.3e-32	2	2
ENSACIP00000003311	KH_2	PF07650.17	3.3e-11	1	1
ENSACIP00000003354	KH_2	PF07650.17	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000003467	-	639	-	ENSACIP00000003354	212 (aa)	-	-
ENSACIT00000003453	-	1014	-	ENSACIP00000003341	337 (aa)	-	-
ENSACIT00000003423	-	981	-	ENSACIP00000003311	326 (aa)	-	-

Gene Model

Click here to download ENSACIG00000002577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000002577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000002577	zgc:110045	95	73.585	ENSACIG00000002739	-	99	67.544
ENSACIG00000002577	zgc:110045	81	40.000	ENSACIG00000014814	hnrpkl	62	43.836
ENSACIG00000002577	zgc:110045	95	69.820	ENSACIG00000010933	pcbp3	95	80.925
ENSACIG00000002577	zgc:110045	67	35.821	ENSACIG00000007544	-	52	39.394
ENSACIG00000002577	zgc:110045	87	40.909	ENSACIG00000017818	nova1	93	34.247
ENSACIG00000002577	zgc:110045	86	59.596	ENSACIG00000020434	-	72	59.596
ENSACIG00000002577	zgc:110045	96	64.759	ENSACIG00000000035	pcbp2	97	64.759
ENSACIG00000002577	zgc:110045	87	57.460	ENSACIG00000015264	pcbp4	66	57.500
ENSACIG00000002577	zgc:110045	68	36.145	ENSACIG00000005212	-	56	36.145
ENSACIG00000002577	zgc:110045	89	39.706	ENSACIG00000009298	khsrp	59	40.000
ENSACIG00000002577	zgc:110045	96	62.769	ENSACIG00000016893	PCBP2	97	62.769
ENSACIG00000002577	zgc:110045	91	31.034	ENSACIG00000001392	igf2bp3	60	31.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000002577	zgc:110045	97	73.239	ENSG00000183570	PCBP3	99	66.298	Homo_sapiens
ENSACIG00000002577	zgc:110045	99	94.009	ENSAPOG00000023735	zgc:110045	94	94.009	Acanthochromis_polyacanthus
ENSACIG00000002577	zgc:110045	91	95.455	ENSAOCG00000005266	zgc:110045	99	93.720	Amphiprion_ocellaris
ENSACIG00000002577	zgc:110045	99	93.088	ENSAPEG00000000729	zgc:110045	73	93.088	Amphiprion_percula
ENSACIG00000002577	zgc:110045	82	97.170	ENSATEG00000011191	zgc:110045	65	97.170	Anabas_testudineus
ENSACIG00000002577	zgc:110045	99	93.088	ENSACLG00000019285	zgc:110045	73	93.088	Astatotilapia_calliptera
ENSACIG00000002577	zgc:110045	96	73.934	ENSBTAG00000030775	PCBP3	99	67.232	Bos_taurus
ENSACIG00000002577	zgc:110045	96	73.148	ENSCAFG00000011907	PCBP3	91	68.605	Canis_familiaris
ENSACIG00000002577	zgc:110045	96	75.238	ENSCHIG00000015841	PCBP3	90	69.027	Capra_hircus
ENSACIG00000002577	zgc:110045	97	73.094	ENSTSYG00000005254	PCBP3	91	73.094	Carlito_syrichta
ENSACIG00000002577	zgc:110045	99	54.192	ENSCAPG00000006767	PCBP3	83	54.192	Cavia_aperea
ENSACIG00000002577	zgc:110045	96	73.934	ENSCPOG00000003648	PCBP3	91	67.826	Cavia_porcellus
ENSACIG00000002577	zgc:110045	96	73.934	ENSCCAG00000024561	PCBP3	99	63.873	Cebus_capucinus
ENSACIG00000002577	zgc:110045	96	73.934	ENSCATG00000038419	PCBP3	99	68.857	Cercocebus_atys
ENSACIG00000002577	zgc:110045	96	73.934	ENSCLAG00000006667	PCBP3	91	67.826	Chinchilla_lanigera
ENSACIG00000002577	zgc:110045	96	73.934	ENSCANG00000026757	PCBP3	99	66.298	Colobus_angolensis_palliatus
ENSACIG00000002577	zgc:110045	96	73.148	ENSCGRG00001006836	Pcbp3	91	67.826	Cricetulus_griseus_chok1gshd
ENSACIG00000002577	zgc:110045	96	73.148	ENSCGRG00000001837	Pcbp3	91	67.826	Cricetulus_griseus_crigri
ENSACIG00000002577	zgc:110045	99	91.244	ENSCSEG00000010020	zgc:110045	98	91.244	Cynoglossus_semilaevis
ENSACIG00000002577	zgc:110045	95	91.262	ENSCVAG00000004726	zgc:110045	93	91.262	Cyprinodon_variegatus
ENSACIG00000002577	zgc:110045	99	76.147	ENSDARG00000057141	zgc:110045	97	76.147	Danio_rerio
ENSACIG00000002577	zgc:110045	96	73.934	ENSDNOG00000049518	PCBP3	92	67.723	Dasypus_novemcinctus
ENSACIG00000002577	zgc:110045	96	70.742	ENSDORG00000003640	Pcbp3	93	70.742	Dipodomys_ordii
ENSACIG00000002577	zgc:110045	93	71.845	ENSEBUG00000009697	zgc:110045	87	74.860	Eptatretus_burgeri
ENSACIG00000002577	zgc:110045	96	73.460	ENSEASG00005007068	PCBP3	91	67.742	Equus_asinus_asinus
ENSACIG00000002577	zgc:110045	96	73.460	ENSECAG00000012413	PCBP3	91	67.742	Equus_caballus
ENSACIG00000002577	zgc:110045	99	81.735	ENSELUG00000019784	zgc:110045	93	69.048	Esox_lucius
ENSACIG00000002577	zgc:110045	96	73.934	ENSFCAG00000014812	PCBP3	91	67.536	Felis_catus
ENSACIG00000002577	zgc:110045	96	73.934	ENSFDAG00000009117	PCBP3	91	67.560	Fukomys_damarensis
ENSACIG00000002577	zgc:110045	91	91.542	ENSFHEG00000018838	-	98	88.263	Fundulus_heteroclitus
ENSACIG00000002577	zgc:110045	92	85.577	ENSGMOG00000005953	zgc:110045	92	85.526	Gadus_morhua
ENSACIG00000002577	zgc:110045	99	93.088	ENSGAFG00000017864	zgc:110045	96	93.088	Gambusia_affinis
ENSACIG00000002577	zgc:110045	97	90.233	ENSGACG00000003044	zgc:110045	100	84.257	Gasterosteus_aculeatus
ENSACIG00000002577	zgc:110045	96	73.934	ENSGGOG00000003683	PCBP3	92	67.826	Gorilla_gorilla
ENSACIG00000002577	zgc:110045	99	93.088	ENSHBUG00000012495	zgc:110045	94	93.088	Haplochromis_burtoni
ENSACIG00000002577	zgc:110045	96	75.610	ENSHGLG00000018620	PCBP3	91	69.207	Heterocephalus_glaber_female
ENSACIG00000002577	zgc:110045	96	75.610	ENSHGLG00100013590	PCBP3	91	69.207	Heterocephalus_glaber_male
ENSACIG00000002577	zgc:110045	100	89.140	ENSHCOG00000000818	zgc:110045	100	89.140	Hippocampus_comes
ENSACIG00000002577	zgc:110045	99	73.394	ENSIPUG00000003932	zgc:110045	81	73.394	Ictalurus_punctatus
ENSACIG00000002577	zgc:110045	96	73.148	ENSSTOG00000007178	PCBP3	91	67.826	Ictidomys_tridecemlineatus
ENSACIG00000002577	zgc:110045	96	74.641	ENSJJAG00000021192	Pcbp3	91	68.116	Jaculus_jaculus
ENSACIG00000002577	zgc:110045	88	91.282	ENSKMAG00000016179	-	98	90.050	Kryptolebias_marmoratus
ENSACIG00000002577	zgc:110045	100	88.728	ENSLBEG00000023074	zgc:110045	100	88.728	Labrus_bergylta
ENSACIG00000002577	zgc:110045	96	74.286	ENSLAFG00000020835	PCBP3	99	68.314	Loxodonta_africana
ENSACIG00000002577	zgc:110045	96	73.934	ENSMFAG00000034574	PCBP3	99	68.857	Macaca_fascicularis
ENSACIG00000002577	zgc:110045	96	73.934	ENSMMUG00000003825	PCBP3	99	66.049	Macaca_mulatta
ENSACIG00000002577	zgc:110045	96	73.934	ENSMNEG00000035551	PCBP3	99	68.857	Macaca_nemestrina
ENSACIG00000002577	zgc:110045	96	73.934	ENSMLEG00000038785	PCBP3	99	68.857	Mandrillus_leucophaeus
ENSACIG00000002577	zgc:110045	99	92.627	ENSMAMG00000014389	zgc:110045	97	92.627	Mastacembelus_armatus
ENSACIG00000002577	zgc:110045	99	93.088	ENSMZEG00005011785	zgc:110045	73	93.088	Maylandia_zebra
ENSACIG00000002577	zgc:110045	94	76.961	ENSMAUG00000007036	Pcbp3	89	69.970	Mesocricetus_auratus
ENSACIG00000002577	zgc:110045	96	73.460	ENSMICG00000012679	PCBP3	91	67.536	Microcebus_murinus
ENSACIG00000002577	zgc:110045	96	73.148	ENSMOCG00000016127	Pcbp3	91	67.826	Microtus_ochrogaster
ENSACIG00000002577	zgc:110045	91	93.782	ENSMMOG00000008399	zgc:110045	99	93.069	Mola_mola
ENSACIG00000002577	zgc:110045	90	94.241	ENSMALG00000008763	zgc:110045	100	92.537	Monopterus_albus
ENSACIG00000002577	zgc:110045	96	74.057	MGP_CAROLIEiJ_G0015475	Pcbp3	92	74.057	Mus_caroli
ENSACIG00000002577	zgc:110045	97	73.239	ENSMUSG00000001120	Pcbp3	92	74.057	Mus_musculus
ENSACIG00000002577	zgc:110045	96	74.057	MGP_PahariEiJ_G0030889	Pcbp3	92	74.057	Mus_pahari
ENSACIG00000002577	zgc:110045	96	74.057	MGP_SPRETEiJ_G0016288	Pcbp3	92	74.057	Mus_spretus
ENSACIG00000002577	zgc:110045	96	73.934	ENSMLUG00000003074	PCBP3	91	66.572	Myotis_lucifugus
ENSACIG00000002577	zgc:110045	96	73.148	ENSNGAG00000005416	Pcbp3	91	67.826	Nannospalax_galili
ENSACIG00000002577	zgc:110045	99	93.088	ENSNBRG00000017646	zgc:110045	73	93.088	Neolamprologus_brichardi
ENSACIG00000002577	zgc:110045	96	73.934	ENSNLEG00000002639	PCBP3	91	67.826	Nomascus_leucogenys
ENSACIG00000002577	zgc:110045	97	69.697	ENSMEUG00000012960	PCBP3	99	62.431	Notamacropus_eugenii
ENSACIG00000002577	zgc:110045	96	76.847	ENSODEG00000012873	PCBP3	91	69.436	Octodon_degus
ENSACIG00000002577	zgc:110045	99	93.548	ENSONIG00000010370	zgc:110045	77	93.548	Oreochromis_niloticus
ENSACIG00000002577	zgc:110045	96	70.306	ENSOANG00000006265	PCBP3	90	67.315	Ornithorhynchus_anatinus
ENSACIG00000002577	zgc:110045	99	92.627	ENSORLG00000014385	-	72	88.644	Oryzias_latipes
ENSACIG00000002577	zgc:110045	99	96.651	ENSORLG00020003139	zgc:110045	89	96.651	Oryzias_latipes_hni
ENSACIG00000002577	zgc:110045	99	92.627	ENSOMEG00000015459	-	72	88.644	Oryzias_melastigma
ENSACIG00000002577	zgc:110045	96	68.981	ENSOARG00000012704	PCBP3	91	65.889	Ovis_aries
ENSACIG00000002577	zgc:110045	96	73.934	ENSPPAG00000021940	PCBP3	91	67.826	Pan_paniscus
ENSACIG00000002577	zgc:110045	96	73.934	ENSPPRG00000003933	PCBP3	91	67.536	Panthera_pardus
ENSACIG00000002577	zgc:110045	99	56.395	ENSPTIG00000012038	PCBP3	90	56.891	Panthera_tigris_altaica
ENSACIG00000002577	zgc:110045	99	51.966	ENSPTRG00000014010	PCBP3	99	51.966	Pan_troglodytes
ENSACIG00000002577	zgc:110045	96	73.934	ENSPANG00000023631	PCBP3	99	68.857	Papio_anubis
ENSACIG00000002577	zgc:110045	94	82.803	ENSPMGG00000021588	-	72	82.803	Periophthalmus_magnuspinnatus
ENSACIG00000002577	zgc:110045	98	60.766	ENSPMGG00000022531	-	96	60.766	Periophthalmus_magnuspinnatus
ENSACIG00000002577	zgc:110045	99	70.175	ENSPEMG00000000587	Pcbp3	91	70.175	Peromyscus_maniculatus_bairdii
ENSACIG00000002577	zgc:110045	67	64.167	ENSPMAG00000004719	zgc:110045	94	64.167	Petromyzon_marinus
ENSACIG00000002577	zgc:110045	97	92.056	ENSPFOG00000002348	zgc:110045	93	92.056	Poecilia_formosa
ENSACIG00000002577	zgc:110045	99	96.172	ENSPLAG00000017488	zgc:110045	95	96.172	Poecilia_latipinna
ENSACIG00000002577	zgc:110045	99	93.088	ENSPMEG00000012762	zgc:110045	96	93.088	Poecilia_mexicana
ENSACIG00000002577	zgc:110045	99	91.705	ENSPREG00000001797	zgc:110045	97	91.324	Poecilia_reticulata
ENSACIG00000002577	zgc:110045	86	77.596	ENSPPYG00000011525	-	92	66.406	Pongo_abelii
ENSACIG00000002577	zgc:110045	93	56.054	ENSPCAG00000001454	PCBP3	98	54.252	Procavia_capensis
ENSACIG00000002577	zgc:110045	96	73.460	ENSPCOG00000013797	PCBP3	99	63.739	Propithecus_coquereli
ENSACIG00000002577	zgc:110045	96	68.559	ENSPVAG00000000832	PCBP3	73	75.635	Pteropus_vampyrus
ENSACIG00000002577	zgc:110045	100	96.698	ENSPNYG00000004637	zgc:110045	100	96.698	Pundamilia_nyererei
ENSACIG00000002577	zgc:110045	99	76.959	ENSPNAG00000004501	zgc:110045	97	76.959	Pygocentrus_nattereri
ENSACIG00000002577	zgc:110045	96	73.934	ENSRROG00000034567	PCBP3	99	62.162	Rhinopithecus_roxellana
ENSACIG00000002577	zgc:110045	96	73.934	ENSSBOG00000005789	PCBP3	92	68.263	Saimiri_boliviensis_boliviensis
ENSACIG00000002577	zgc:110045	99	93.088	ENSSMAG00000013541	zgc:110045	91	93.953	Scophthalmus_maximus
ENSACIG00000002577	zgc:110045	92	96.875	ENSSDUG00000019371	zgc:110045	66	96.875	Seriola_dumerili
ENSACIG00000002577	zgc:110045	99	93.548	ENSSLDG00000021064	zgc:110045	73	93.548	Seriola_lalandi_dorsalis
ENSACIG00000002577	zgc:110045	65	80.292	ENSSARG00000007629	-	100	62.201	Sorex_araneus
ENSACIG00000002577	zgc:110045	99	94.009	ENSSPAG00000000563	zgc:110045	94	94.009	Stegastes_partitus
ENSACIG00000002577	zgc:110045	96	73.934	ENSSSCG00000023041	PCBP3	91	67.449	Sus_scrofa
ENSACIG00000002577	zgc:110045	90	88.442	ENSTRUG00000017789	zgc:110045	98	88.442	Takifugu_rubripes
ENSACIG00000002577	zgc:110045	86	81.959	ENSTNIG00000003546	zgc:110045	98	82.828	Tetraodon_nigroviridis
ENSACIG00000002577	zgc:110045	96	56.019	ENSTBEG00000011882	-	73	55.230	Tupaia_belangeri
ENSACIG00000002577	zgc:110045	96	75.962	ENSUAMG00000006491	PCBP3	99	70.468	Ursus_americanus
ENSACIG00000002577	zgc:110045	99	66.862	ENSUMAG00000025403	PCBP3	91	66.862	Ursus_maritimus
ENSACIG00000002577	zgc:110045	96	72.059	ENSVVUG00000023862	PCBP3	99	64.706	Vulpes_vulpes
ENSACIG00000002577	zgc:110045	85	87.845	ENSXCOG00000005968	zgc:110045	87	96.933	Xiphophorus_couchianus
ENSACIG00000002577	zgc:110045	99	92.166	ENSXMAG00000008030	zgc:110045	71	92.166	Xiphophorus_maculatus