EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000002588 (Gene tree)
Gene ID: -
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1 ribosome biogenesis factor
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 27531 bases
Position: chrCCOE01000098.1:458421-485951
Accession: ZDB-GENE-060720-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000003363	AARP2CN	PF08142.12	7e-32	1	1
ENSACIP00000003396	AARP2CN	PF08142.12	8.4e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000003476	-	3579	-	ENSACIP00000003363	1192 (aa)	-	-
ENSACIT00000003509	-	3675	-	ENSACIP00000003396	1224 (aa)	-	-

Gene Model

Click here to download ENSACIG00000002588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000002588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000002588	bms1	85	77.500	ENSG00000165733	BMS1	86	69.044	Homo_sapiens
ENSACIG00000002588	bms1	88	79.178	ENSAPOG00000002296	bms1	100	79.011	Acanthochromis_polyacanthus
ENSACIG00000002588	bms1	85	77.612	ENSAMEG00000016834	BMS1	77	80.217	Ailuropoda_melanoleuca
ENSACIG00000002588	bms1	99	80.265	ENSAOCG00000018088	bms1	100	80.032	Amphiprion_ocellaris
ENSACIG00000002588	bms1	99	80.166	ENSAPEG00000014673	bms1	100	79.711	Amphiprion_percula
ENSACIG00000002588	bms1	100	78.537	ENSATEG00000023465	bms1	100	77.910	Anabas_testudineus
ENSACIG00000002588	bms1	81	77.307	ENSAPLG00000003759	BMS1	86	71.025	Anas_platyrhynchos
ENSACIG00000002588	bms1	89	76.368	ENSACAG00000004537	-	78	79.404	Anolis_carolinensis
ENSACIG00000002588	bms1	94	67.846	ENSANAG00000023432	BMS1	86	68.071	Aotus_nancymaae
ENSACIG00000002588	bms1	100	82.864	ENSACLG00000001294	bms1	99	84.127	Astatotilapia_calliptera
ENSACIG00000002588	bms1	92	75.520	ENSAMXG00000011236	bms1	90	87.228	Astyanax_mexicanus
ENSACIG00000002588	bms1	85	78.500	ENSBTAG00000012878	BMS1	76	81.199	Bos_taurus
ENSACIG00000002588	bms1	84	54.523	WBGene00022021	Y61A9LA.10	93	57.500	Caenorhabditis_elegans
ENSACIG00000002588	bms1	94	68.489	ENSCJAG00000021705	BMS1	86	68.720	Callithrix_jacchus
ENSACIG00000002588	bms1	94	68.058	ENSCAFG00000007114	BMS1	77	80.381	Canis_familiaris
ENSACIG00000002588	bms1	94	68.058	ENSCAFG00020025282	BMS1	77	80.381	Canis_lupus_dingo
ENSACIG00000002588	bms1	85	78.500	ENSCHIG00000023251	BMS1	76	81.199	Capra_hircus
ENSACIG00000002588	bms1	92	66.408	ENSCAPG00000008652	BMS1	76	77.929	Cavia_aperea
ENSACIG00000002588	bms1	94	68.006	ENSCPOG00000000502	BMS1	77	79.564	Cavia_porcellus
ENSACIG00000002588	bms1	94	58.521	ENSCCAG00000024969	-	86	58.995	Cebus_capucinus
ENSACIG00000002588	bms1	97	66.411	ENSCATG00000030625	-	77	79.837	Cercocebus_atys
ENSACIG00000002588	bms1	83	53.924	ENSCATG00000008695	-	77	58.296	Cercocebus_atys
ENSACIG00000002588	bms1	94	68.167	ENSCLAG00000002446	BMS1	97	62.160	Chinchilla_lanigera
ENSACIG00000002588	bms1	97	66.258	ENSCSAG00000011118	BMS1	86	68.720	Chlorocebus_sabaeus
ENSACIG00000002588	bms1	85	76.000	ENSCHOG00000011055	BMS1	76	79.292	Choloepus_hoffmanni
ENSACIG00000002588	bms1	96	68.850	ENSCPBG00000025581	BMS1	87	69.663	Chrysemys_picta_bellii
ENSACIG00000002588	bms1	83	63.613	ENSCING00000003181	-	93	64.516	Ciona_intestinalis
ENSACIG00000002588	bms1	75	52.273	ENSCSAVG00000004113	-	84	58.671	Ciona_savignyi
ENSACIG00000002588	bms1	96	69.044	ENSCANG00000011609	BMS1	87	69.044	Colobus_angolensis_palliatus
ENSACIG00000002588	bms1	90	78.295	ENSCGRG00001019461	Bms1	77	79.837	Cricetulus_griseus_chok1gshd
ENSACIG00000002588	bms1	90	78.295	ENSCGRG00000009016	Bms1	77	79.837	Cricetulus_griseus_crigri
ENSACIG00000002588	bms1	61	72.959	ENSCSEG00000002469	bms1	100	74.940	Cynoglossus_semilaevis
ENSACIG00000002588	bms1	100	77.023	ENSCVAG00000008371	bms1	99	78.002	Cyprinodon_variegatus
ENSACIG00000002588	bms1	100	71.173	ENSDARG00000054154	bms1	97	71.739	Danio_rerio
ENSACIG00000002588	bms1	94	68.182	ENSDNOG00000015761	BMS1	76	80.654	Dasypus_novemcinctus
ENSACIG00000002588	bms1	85	77.250	ENSDORG00000002982	Bms1	78	79.564	Dipodomys_ordii
ENSACIG00000002588	bms1	86	63.568	FBgn0036686	CG7728	85	64.754	Drosophila_melanogaster
ENSACIG00000002588	bms1	78	76.000	ENSETEG00000009554	BMS1	67	78.747	Echinops_telfairi
ENSACIG00000002588	bms1	85	77.500	ENSEASG00005006894	BMS1	77	80.381	Equus_asinus_asinus
ENSACIG00000002588	bms1	94	68.277	ENSECAG00000001358	BMS1	87	68.994	Equus_caballus
ENSACIG00000002588	bms1	100	71.372	ENSELUG00000001756	bms1	97	72.419	Esox_lucius
ENSACIG00000002588	bms1	92	77.500	ENSFCAG00000011220	BMS1	77	80.109	Felis_catus
ENSACIG00000002588	bms1	95	69.071	ENSFALG00000006882	BMS1	84	77.556	Ficedula_albicollis
ENSACIG00000002588	bms1	99	63.688	ENSFDAG00000001422	BMS1	77	79.019	Fukomys_damarensis
ENSACIG00000002588	bms1	100	78.282	ENSFHEG00000003367	bms1	100	77.642	Fundulus_heteroclitus
ENSACIG00000002588	bms1	99	69.825	ENSGMOG00000000718	bms1	97	75.962	Gadus_morhua
ENSACIG00000002588	bms1	95	69.243	ENSGALG00000002624	BMS1	88	69.726	Gallus_gallus
ENSACIG00000002588	bms1	99	80.635	ENSGACG00000015334	bms1	100	72.162	Gasterosteus_aculeatus
ENSACIG00000002588	bms1	98	68.590	ENSGAGG00000003467	BMS1	99	63.201	Gopherus_agassizii
ENSACIG00000002588	bms1	100	82.756	ENSHBUG00000022628	bms1	99	84.422	Haplochromis_burtoni
ENSACIG00000002588	bms1	95	68.167	ENSHGLG00000000477	BMS1	97	62.379	Heterocephalus_glaber_female
ENSACIG00000002588	bms1	95	68.167	ENSHGLG00100002176	BMS1	97	62.379	Heterocephalus_glaber_male
ENSACIG00000002588	bms1	99	75.417	ENSHCOG00000017604	bms1	99	74.874	Hippocampus_comes
ENSACIG00000002588	bms1	95	84.289	ENSIPUG00000017855	bms1	92	84.673	Ictalurus_punctatus
ENSACIG00000002588	bms1	85	78.250	ENSSTOG00000015063	BMS1	87	69.044	Ictidomys_tridecemlineatus
ENSACIG00000002588	bms1	86	77.750	ENSJJAG00000017328	Bms1	78	80.109	Jaculus_jaculus
ENSACIG00000002588	bms1	66	71.638	ENSKMAG00000021982	bms1	97	71.201	Kryptolebias_marmoratus
ENSACIG00000002588	bms1	100	73.291	ENSLBEG00000028208	bms1	100	73.844	Labrus_bergylta
ENSACIG00000002588	bms1	97	65.524	ENSLACG00000001600	BMS1	88	67.617	Latimeria_chalumnae
ENSACIG00000002588	bms1	55	72.340	ENSLOCG00000012914	bms1	97	70.453	Lepisosteus_oculatus
ENSACIG00000002588	bms1	97	66.881	ENSLAFG00000006250	BMS1	77	79.292	Loxodonta_africana
ENSACIG00000002588	bms1	87	65.891	ENSMFAG00000037771	BMS1	83	80.109	Macaca_fascicularis
ENSACIG00000002588	bms1	76	64.170	ENSMMUG00000007426	-	84	63.745	Macaca_mulatta
ENSACIG00000002588	bms1	73	57.644	ENSMLEG00000029084	-	77	57.853	Mandrillus_leucophaeus
ENSACIG00000002588	bms1	100	76.776	ENSMAMG00000020855	bms1	100	75.060	Mastacembelus_armatus
ENSACIG00000002588	bms1	100	82.864	ENSMZEG00005005663	bms1	99	84.127	Maylandia_zebra
ENSACIG00000002588	bms1	90	68.910	ENSMGAG00000001170	BMS1	78	79.009	Meleagris_gallopavo
ENSACIG00000002588	bms1	90	78.295	ENSMAUG00000002195	Bms1	93	65.079	Mesocricetus_auratus
ENSACIG00000002588	bms1	98	65.158	ENSMICG00000009977	BMS1	77	79.837	Microcebus_murinus
ENSACIG00000002588	bms1	89	78.295	ENSMOCG00000002038	Bms1	82	79.837	Microtus_ochrogaster
ENSACIG00000002588	bms1	99	76.628	ENSMMOG00000000977	bms1	100	75.951	Mola_mola
ENSACIG00000002588	bms1	92	78.304	ENSMODG00000001177	BMS1	77	80.978	Monodelphis_domestica
ENSACIG00000002588	bms1	100	75.631	ENSMALG00000009680	bms1	100	76.461	Monopterus_albus
ENSACIG00000002588	bms1	67	76.131	MGP_CAROLIEiJ_G0028785	-	72	79.019	Mus_caroli
ENSACIG00000002588	bms1	90	77.778	ENSMUSG00000030138	Bms1	78	79.292	Mus_musculus
ENSACIG00000002588	bms1	84	77.778	MGP_PahariEiJ_G0022539	Bms1	82	79.292	Mus_pahari
ENSACIG00000002588	bms1	90	77.519	MGP_SPRETEiJ_G0029816	Bms1	82	79.019	Mus_spretus
ENSACIG00000002588	bms1	94	68.760	ENSMPUG00000017276	BMS1	77	80.381	Mustela_putorius_furo
ENSACIG00000002588	bms1	92	68.336	ENSMLUG00000003260	BMS1	77	79.133	Myotis_lucifugus
ENSACIG00000002588	bms1	99	57.108	ENSNGAG00000015258	Bms1	82	68.344	Nannospalax_galili
ENSACIG00000002588	bms1	96	66.937	ENSNLEG00000015791	BMS1	87	66.937	Nomascus_leucogenys
ENSACIG00000002588	bms1	85	78.000	ENSOPRG00000005195	BMS1	77	80.381	Ochotona_princeps
ENSACIG00000002588	bms1	85	78.250	ENSODEG00000005554	BMS1	97	62.220	Octodon_degus
ENSACIG00000002588	bms1	100	84.405	ENSONIG00000007227	bms1	99	84.641	Oreochromis_niloticus
ENSACIG00000002588	bms1	99	63.846	ENSOANG00000000662	-	87	66.987	Ornithorhynchus_anatinus
ENSACIG00000002588	bms1	94	68.810	ENSOCUG00000005354	BMS1	77	80.381	Oryctolagus_cuniculus
ENSACIG00000002588	bms1	99	76.993	ENSORLG00000014655	bms1	99	77.471	Oryzias_latipes
ENSACIG00000002588	bms1	99	75.873	ENSORLG00020016246	bms1	99	75.929	Oryzias_latipes_hni
ENSACIG00000002588	bms1	99	76.214	ENSORLG00015014183	bms1	99	76.499	Oryzias_latipes_hsok
ENSACIG00000002588	bms1	99	77.348	ENSOMEG00000015042	bms1	99	78.086	Oryzias_melastigma
ENSACIG00000002588	bms1	94	68.489	ENSOGAG00000006511	BMS1	76	79.675	Otolemur_garnettii
ENSACIG00000002588	bms1	85	77.723	ENSOARG00000003900	BMS1	77	80.323	Ovis_aries
ENSACIG00000002588	bms1	85	77.250	ENSPPAG00000027837	BMS1	86	67.404	Pan_paniscus
ENSACIG00000002588	bms1	99	64.672	ENSPPRG00000001311	BMS1	77	80.109	Panthera_pardus
ENSACIG00000002588	bms1	89	77.500	ENSPTIG00000009652	BMS1	76	80.109	Panthera_tigris_altaica
ENSACIG00000002588	bms1	85	77.250	ENSPTRG00000002441	BMS1	86	69.206	Pan_troglodytes
ENSACIG00000002588	bms1	88	81.931	ENSPKIG00000008165	bms1	86	75.517	Paramormyrops_kingsleyae
ENSACIG00000002588	bms1	85	77.805	ENSPSIG00000006481	BMS1	77	80.541	Pelodiscus_sinensis
ENSACIG00000002588	bms1	99	66.263	ENSPEMG00000022467	Bms1	86	66.935	Peromyscus_maniculatus_bairdii
ENSACIG00000002588	bms1	85	77.307	ENSPCIG00000001339	BMS1	85	73.803	Phascolarctos_cinereus
ENSACIG00000002588	bms1	95	81.081	ENSPFOG00000015180	bms1	99	76.168	Poecilia_formosa
ENSACIG00000002588	bms1	99	77.319	ENSPMEG00000023176	bms1	94	76.710	Poecilia_mexicana
ENSACIG00000002588	bms1	94	82.714	ENSPREG00000002695	bms1	98	77.430	Poecilia_reticulata
ENSACIG00000002588	bms1	51	66.862	ENSPPYG00000002836	-	78	66.934	Pongo_abelii
ENSACIG00000002588	bms1	70	75.510	ENSPCAG00000014528	BMS1	64	75.510	Procavia_capensis
ENSACIG00000002588	bms1	90	64.783	ENSPCOG00000023834	-	87	66.880	Propithecus_coquereli
ENSACIG00000002588	bms1	92	76.750	ENSPVAG00000000725	BMS1	77	79.564	Pteropus_vampyrus
ENSACIG00000002588	bms1	100	83.672	ENSPNYG00000018866	bms1	100	83.753	Pundamilia_nyererei
ENSACIG00000002588	bms1	94	77.476	ENSPNAG00000000676	bms1	97	71.059	Pygocentrus_nattereri
ENSACIG00000002588	bms1	70	76.000	ENSRNOG00000006576	Bms1	78	78.747	Rattus_norvegicus
ENSACIG00000002588	bms1	96	68.720	ENSRROG00000040101	BMS1	85	70.850	Rhinopithecus_roxellana
ENSACIG00000002588	bms1	76	47.149	YPL217C	-	78	48.804	Saccharomyces_cerevisiae
ENSACIG00000002588	bms1	94	69.368	ENSSBOG00000035778	BMS1	87	69.044	Saimiri_boliviensis_boliviensis
ENSACIG00000002588	bms1	90	77.805	ENSSHAG00000005062	BMS1	87	69.144	Sarcophilus_harrisii
ENSACIG00000002588	bms1	96	76.715	ENSSFOG00015022313	bms1	91	88.140	Scleropages_formosus
ENSACIG00000002588	bms1	50	82.907	ENSSMAG00000019966	bms1	90	91.948	Scophthalmus_maximus
ENSACIG00000002588	bms1	94	84.244	ENSSDUG00000016875	bms1	100	77.813	Seriola_dumerili
ENSACIG00000002588	bms1	99	77.607	ENSSLDG00000015199	bms1	100	76.485	Seriola_lalandi_dorsalis
ENSACIG00000002588	bms1	61	66.260	ENSSARG00000014407	BMS1	75	74.000	Sorex_araneus
ENSACIG00000002588	bms1	85	78.500	ENSSPUG00000014454	BMS1	88	68.710	Sphenodon_punctatus
ENSACIG00000002588	bms1	85	78.500	ENSSSCG00000010198	BMS1	87	69.305	Sus_scrofa
ENSACIG00000002588	bms1	85	78.173	ENSTGUG00000006302	-	99	61.960	Taeniopygia_guttata
ENSACIG00000002588	bms1	99	69.554	ENSTRUG00000008028	bms1	99	68.806	Takifugu_rubripes
ENSACIG00000002588	bms1	99	71.763	ENSTNIG00000006216	bms1	79	86.523	Tetraodon_nigroviridis
ENSACIG00000002588	bms1	63	71.429	ENSTBEG00000001673	-	63	71.478	Tupaia_belangeri
ENSACIG00000002588	bms1	95	68.760	ENSTTRG00000007983	BMS1	77	81.199	Tursiops_truncatus
ENSACIG00000002588	bms1	85	78.000	ENSUAMG00000023996	BMS1	77	80.654	Ursus_americanus
ENSACIG00000002588	bms1	85	78.000	ENSUMAG00000016523	BMS1	77	80.654	Ursus_maritimus
ENSACIG00000002588	bms1	66	78.088	ENSVPAG00000007477	BMS1	83	71.519	Vicugna_pacos
ENSACIG00000002588	bms1	94	68.058	ENSVVUG00000021305	BMS1	97	63.093	Vulpes_vulpes
ENSACIG00000002588	bms1	98	61.557	ENSXETG00000008158	bms1	99	61.396	Xenopus_tropicalis
ENSACIG00000002588	bms1	99	76.942	ENSXCOG00000000506	bms1	93	89.313	Xiphophorus_couchianus
ENSACIG00000002588	bms1	99	77.169	ENSXMAG00000014236	bms1	99	77.637	Xiphophorus_maculatus