EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000002623 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 1241 bases
Position: chrCCOE01001657.1:90909-92149
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000003287	RRM_1	PF00076.22	4.3e-34	1	2
ENSACIP00000003287	RRM_1	PF00076.22	4.3e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000003399	-	576	-	ENSACIP00000003287	191 (aa)	-	-

Gene Model

Click here to download ENSACIG00000002623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000002623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000002623	-	90	46.821	ENSACIG00000018649	srsf4	89	49.593
ENSACIG00000002623	-	93	68.362	ENSACIG00000015765	srsf9	66	68.605
ENSACIG00000002623	-	84	50.867	ENSACIG00000010742	srsf5b	79	51.145
ENSACIG00000002623	-	85	44.379	ENSACIG00000020091	-	94	37.405
ENSACIG00000002623	-	85	43.275	ENSACIG00000023658	-	51	43.275
ENSACIG00000002623	-	87	45.556	ENSACIG00000011892	srsf5a	96	41.727
ENSACIG00000002623	-	95	87.912	ENSACIG00000008091	srsf1a	77	87.293

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000002623	-	98	93.299	ENSACLG00000021693	-	76	93.717	Astatotilapia_calliptera
ENSACIG00000002623	-	96	88.043	ENSACLG00000005676	-	73	87.293	Astatotilapia_calliptera
ENSACIG00000002623	-	91	62.295	WBGene00004700	rsp-3	71	60.870	Caenorhabditis_elegans
ENSACIG00000002623	-	90	71.345	ENSCING00000007375	-	71	69.006	Ciona_intestinalis
ENSACIG00000002623	-	63	66.116	ENSCING00000000257	-	69	64.463	Ciona_intestinalis
ENSACIG00000002623	-	63	63.333	ENSCSAVG00000003567	-	70	61.667	Ciona_savignyi
ENSACIG00000002623	-	90	71.930	ENSCSAVG00000006093	-	85	69.591	Ciona_savignyi
ENSACIG00000002623	-	90	67.429	FBgn0283477	SF2	68	66.857	Drosophila_melanogaster
ENSACIG00000002623	-	96	77.174	ENSEBUG00000009582	-	78	75.543	Eptatretus_burgeri
ENSACIG00000002623	-	96	91.444	ENSFHEG00000017425	-	98	91.444	Fundulus_heteroclitus
ENSACIG00000002623	-	97	88.172	ENSGMOG00000010606	-	98	87.634	Gadus_morhua
ENSACIG00000002623	-	96	91.489	ENSGAFG00000000609	-	75	91.489	Gambusia_affinis
ENSACIG00000002623	-	96	88.587	ENSGAFG00000012721	-	73	87.845	Gambusia_affinis
ENSACIG00000002623	-	96	87.500	ENSGACG00000011094	-	97	86.885	Gasterosteus_aculeatus
ENSACIG00000002623	-	96	95.263	ENSHBUG00000015576	-	76	94.211	Haplochromis_burtoni
ENSACIG00000002623	-	65	64.800	ENSHBUG00000015600	-	92	59.690	Haplochromis_burtoni
ENSACIG00000002623	-	95	83.784	ENSHCOG00000008016	-	72	83.243	Hippocampus_comes
ENSACIG00000002623	-	95	89.560	ENSMFAG00000034223	-	61	88.462	Macaca_fascicularis
ENSACIG00000002623	-	96	88.043	ENSMZEG00005007947	-	73	87.293	Maylandia_zebra
ENSACIG00000002623	-	98	94.271	ENSMZEG00005019071	-	99	94.737	Maylandia_zebra
ENSACIG00000002623	-	96	91.848	ENSMMOG00000018849	-	74	91.848	Mola_mola
ENSACIG00000002623	-	96	94.764	ENSNBRG00000008134	-	73	94.764	Neolamprologus_brichardi
ENSACIG00000002623	-	96	88.043	ENSNBRG00000019981	-	73	87.293	Neolamprologus_brichardi
ENSACIG00000002623	-	87	66.867	ENSOPRG00000004745	-	96	66.867	Ochotona_princeps
ENSACIG00000002623	-	96	94.271	ENSONIG00000004857	-	76	94.271	Oreochromis_niloticus
ENSACIG00000002623	-	91	54.335	ENSOCUG00000026856	-	96	56.069	Oryctolagus_cuniculus
ENSACIG00000002623	-	98	95.187	ENSORLG00000005314	-	75	95.187	Oryzias_latipes
ENSACIG00000002623	-	98	95.187	ENSORLG00015015497	-	75	95.187	Oryzias_latipes_hsok
ENSACIG00000002623	-	98	93.229	ENSOMEG00000017711	-	75	93.229	Oryzias_melastigma
ENSACIG00000002623	-	96	88.587	ENSPLAG00000019553	-	92	85.946	Poecilia_latipinna
ENSACIG00000002623	-	96	88.587	ENSPLAG00000019613	-	72	87.978	Poecilia_latipinna
ENSACIG00000002623	-	96	92.473	ENSPREG00000016792	-	75	92.473	Poecilia_reticulata
ENSACIG00000002623	-	96	88.043	ENSPNYG00000017115	-	73	87.293	Pundamilia_nyererei
ENSACIG00000002623	-	98	93.299	ENSPNYG00000020651	-	73	94.764	Pundamilia_nyererei
ENSACIG00000002623	-	95	91.758	ENSSFOG00015004989	-	66	90.659	Scleropages_formosus
ENSACIG00000002623	-	95	89.286	ENSSDUG00000003887	-	75	89.286	Seriola_dumerili
ENSACIG00000002623	-	96	84.783	ENSTRUG00000017058	-	75	85.870	Takifugu_rubripes
ENSACIG00000002623	-	96	81.622	ENSTNIG00000009993	-	75	81.081	Tetraodon_nigroviridis
ENSACIG00000002623	-	96	88.587	ENSXCOG00000009643	-	74	87.709	Xiphophorus_couchianus
ENSACIG00000002623	-	96	91.979	ENSXCOG00000017888	-	75	91.979	Xiphophorus_couchianus
ENSACIG00000002623	-	96	91.979	ENSXMAG00000010797	-	75	91.979	Xiphophorus_maculatus