EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000003102 (Gene tree)
Gene ID: -
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: RAB42%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4162 bases
Position: chrCCOE01000163.1:807755-811916
Accession: ZDB-GENE-040426-1983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000003915	MMR_HSR1	PF01926.23	6.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000004042	-	657	-	ENSACIP00000003915	218 (aa)	-	-

Gene Model

Click here to download ENSACIG00000003102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000003102's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000003102	rab42a	69	33.113	ENSACIG00000000100	kras	53	32.317
ENSACIG00000003102	rab42a	79	43.605	ENSACIG00000019049	rab1ab	93	44.604
ENSACIG00000003102	rab42a	67	36.054	ENSACIG00000008620	rab34a	65	36.054
ENSACIG00000003102	rab42a	67	42.763	ENSACIG00000013119	-	75	42.763
ENSACIG00000003102	rab42a	78	42.442	ENSACIG00000020616	rab12	70	42.442
ENSACIG00000003102	rab42a	87	64.249	ENSACIG00000016958	si:dkey-34d22.5	87	64.249
ENSACIG00000003102	rab42a	75	39.521	ENSACIG00000007739	rab9b	81	39.521
ENSACIG00000003102	rab42a	74	34.337	ENSACIG00000022381	-	79	34.337
ENSACIG00000003102	rab42a	100	55.046	ENSACIG00000000154	RAB39B	100	55.046
ENSACIG00000003102	rab42a	69	33.775	ENSACIG00000000699	hrasb	85	32.927
ENSACIG00000003102	rab42a	76	35.758	ENSACIG00000009617	rab18a	77	35.758
ENSACIG00000003102	rab42a	85	34.184	ENSACIG00000007154	rab6ba	91	34.184
ENSACIG00000003102	rab42a	72	39.490	ENSACIG00000014605	rab6a	75	39.490
ENSACIG00000003102	rab42a	84	41.530	ENSACIG00000024376	-	83	41.530
ENSACIG00000003102	rab42a	80	43.429	ENSACIG00000024374	rab11ba	71	43.429
ENSACIG00000003102	rab42a	85	31.720	ENSACIG00000009071	rheb	94	31.720
ENSACIG00000003102	rab42a	75	43.636	ENSACIG00000019803	rab25a	77	43.636
ENSACIG00000003102	rab42a	78	33.529	ENSACIG00000017824	rras	85	33.529
ENSACIG00000003102	rab42a	75	39.521	ENSACIG00000018043	rab9a	82	39.521
ENSACIG00000003102	rab42a	76	42.424	ENSACIG00000008102	rab18b	80	42.424
ENSACIG00000003102	rab42a	74	34.940	ENSACIG00000022208	-	79	34.940
ENSACIG00000003102	rab42a	94	39.806	ENSACIG00000017403	rab11al	84	42.623
ENSACIG00000003102	rab42a	100	55.046	ENSACIG00000023837	-	94	58.209
ENSACIG00000003102	rab42a	65	35.461	ENSACIG00000020496	rab23	75	33.974
ENSACIG00000003102	rab42a	96	37.383	ENSACIG00000010619	rab15	76	42.331
ENSACIG00000003102	rab42a	78	42.604	ENSACIG00000008584	rab13	80	42.604
ENSACIG00000003102	rab42a	63	45.652	ENSACIG00000019631	rab11bb	71	45.652
ENSACIG00000003102	rab42a	72	41.250	ENSACIG00000022520	rab33a	71	41.250
ENSACIG00000003102	rab42a	82	41.011	ENSACIG00000014625	-	87	41.011
ENSACIG00000003102	rab42a	93	39.216	ENSACIG00000003092	rab11a	91	39.899
ENSACIG00000003102	rab42a	74	34.337	ENSACIG00000013630	RAB7A	79	34.337
ENSACIG00000003102	rab42a	75	39.634	ENSACIG00000023222	-	70	39.634
ENSACIG00000003102	rab42a	75	39.521	ENSACIG00000006558	-	82	39.521
ENSACIG00000003102	rab42a	55	30.400	ENSACIG00000013244	arl14	57	30.400
ENSACIG00000003102	rab42a	78	33.918	ENSACIG00000014012	rab22a	87	33.918
ENSACIG00000003102	rab42a	72	37.821	ENSACIG00000014094	rab6bb	74	38.562
ENSACIG00000003102	rab42a	72	38.217	ENSACIG00000010914	RAB41	73	38.217
ENSACIG00000003102	rab42a	67	43.243	ENSACIG00000021459	zgc:101559	64	43.243
ENSACIG00000003102	rab42a	69	45.395	ENSACIG00000021855	rab33ba	63	45.395
ENSACIG00000003102	rab42a	58	33.071	ENSACIG00000015128	si:ch73-116o1.2	67	33.094
ENSACIG00000003102	rab42a	75	35.976	ENSACIG00000010896	rab5c	75	35.976
ENSACIG00000003102	rab42a	78	33.526	ENSACIG00000004859	rab34b	71	33.526
ENSACIG00000003102	rab42a	72	38.994	ENSACIG00000011024	si:dkey-13a21.4	77	38.994
ENSACIG00000003102	rab42a	78	33.526	ENSACIG00000000642	rab36	65	33.526
ENSACIG00000003102	rab42a	72	45.223	ENSACIG00000003157	-	82	45.223
ENSACIG00000003102	rab42a	83	40.000	ENSACIG00000017414	rab25b	86	40.000
ENSACIG00000003102	rab42a	75	39.024	ENSACIG00000009306	RAB15	77	39.024
ENSACIG00000003102	rab42a	76	37.349	ENSACIG00000006949	RAB17	72	37.349
ENSACIG00000003102	rab42a	79	42.775	ENSACIG00000009006	zgc:171927	80	42.775
ENSACIG00000003102	rab42a	75	35.366	ENSACIG00000019251	rab5aa	75	35.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000003102	rab42a	100	97.248	ENSAPOG00000009188	rab42a	100	97.248	Acanthochromis_polyacanthus
ENSACIG00000003102	rab42a	100	96.789	ENSAOCG00000012921	rab42a	83	96.789	Amphiprion_ocellaris
ENSACIG00000003102	rab42a	100	96.789	ENSAPEG00000007713	rab42a	83	96.789	Amphiprion_percula
ENSACIG00000003102	rab42a	100	94.495	ENSATEG00000009052	rab42a	100	94.495	Anabas_testudineus
ENSACIG00000003102	rab42a	100	97.248	ENSACLG00000007514	rab42a	100	97.248	Astatotilapia_calliptera
ENSACIG00000003102	rab42a	100	91.284	ENSAMXG00000032729	rab42a	100	90.367	Astyanax_mexicanus
ENSACIG00000003102	rab42a	100	93.578	ENSCSEG00000010582	rab42a	100	93.578	Cynoglossus_semilaevis
ENSACIG00000003102	rab42a	100	47.032	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSACIG00000003102	rab42a	100	90.826	ENSDARG00000034215	rab42a	100	89.908	Danio_rerio
ENSACIG00000003102	rab42a	100	90.367	ENSELUG00000010345	rab42a	100	90.367	Esox_lucius
ENSACIG00000003102	rab42a	100	95.872	ENSFHEG00000013106	rab42a	100	95.872	Fundulus_heteroclitus
ENSACIG00000003102	rab42a	100	94.954	ENSGAFG00000002141	rab42a	100	94.954	Gambusia_affinis
ENSACIG00000003102	rab42a	100	97.248	ENSHBUG00000015126	rab42a	82	97.248	Haplochromis_burtoni
ENSACIG00000003102	rab42a	100	88.073	ENSIPUG00000011376	rab42a	100	87.156	Ictalurus_punctatus
ENSACIG00000003102	rab42a	100	96.330	ENSKMAG00000007267	rab42a	100	96.330	Kryptolebias_marmoratus
ENSACIG00000003102	rab42a	100	97.248	ENSLBEG00000001193	rab42a	100	97.248	Labrus_bergylta
ENSACIG00000003102	rab42a	100	65.138	ENSLACG00000012755	-	95	68.657	Latimeria_chalumnae
ENSACIG00000003102	rab42a	100	83.486	ENSLOCG00000003453	rab42a	95	88.060	Lepisosteus_oculatus
ENSACIG00000003102	rab42a	100	50.685	ENSLOCG00000015825	-	93	54.545	Lepisosteus_oculatus
ENSACIG00000003102	rab42a	100	97.706	ENSMAMG00000002296	rab42a	100	97.706	Mastacembelus_armatus
ENSACIG00000003102	rab42a	100	97.248	ENSMZEG00005012460	rab42a	82	97.248	Maylandia_zebra
ENSACIG00000003102	rab42a	100	93.119	ENSMMOG00000014358	rab42a	100	93.119	Mola_mola
ENSACIG00000003102	rab42a	100	97.706	ENSNBRG00000021487	rab42a	82	97.706	Neolamprologus_brichardi
ENSACIG00000003102	rab42a	100	96.330	ENSORLG00000022335	rab42a	100	96.330	Oryzias_latipes
ENSACIG00000003102	rab42a	100	96.330	ENSORLG00020013895	rab42a	100	96.330	Oryzias_latipes_hni
ENSACIG00000003102	rab42a	100	96.330	ENSORLG00015004273	rab42a	100	96.330	Oryzias_latipes_hsok
ENSACIG00000003102	rab42a	100	96.330	ENSOMEG00000020418	rab42a	100	96.330	Oryzias_melastigma
ENSACIG00000003102	rab42a	99	47.005	ENSPKIG00000015234	-	93	49.485	Paramormyrops_kingsleyae
ENSACIG00000003102	rab42a	100	78.995	ENSPKIG00000021215	-	93	82.915	Paramormyrops_kingsleyae
ENSACIG00000003102	rab42a	90	96.954	ENSPMGG00000024112	rab42a	90	96.954	Periophthalmus_magnuspinnatus
ENSACIG00000003102	rab42a	100	94.037	ENSPFOG00000004838	rab42a	82	94.037	Poecilia_formosa
ENSACIG00000003102	rab42a	100	94.495	ENSPLAG00000005628	rab42a	100	94.495	Poecilia_latipinna
ENSACIG00000003102	rab42a	100	94.037	ENSPMEG00000019497	rab42a	100	94.037	Poecilia_mexicana
ENSACIG00000003102	rab42a	100	94.954	ENSPREG00000013962	rab42a	100	94.954	Poecilia_reticulata
ENSACIG00000003102	rab42a	100	97.248	ENSPNYG00000010325	rab42a	82	97.248	Pundamilia_nyererei
ENSACIG00000003102	rab42a	100	90.826	ENSPNAG00000016567	rab42a	100	89.908	Pygocentrus_nattereri
ENSACIG00000003102	rab42a	100	85.321	ENSSFOG00015020732	rab42a	100	84.862	Scleropages_formosus
ENSACIG00000003102	rab42a	100	45.662	ENSSFOG00015016000	-	90	49.485	Scleropages_formosus
ENSACIG00000003102	rab42a	100	94.495	ENSSMAG00000020311	rab42a	100	94.495	Scophthalmus_maximus
ENSACIG00000003102	rab42a	100	97.706	ENSSDUG00000011851	rab42a	100	97.706	Seriola_dumerili
ENSACIG00000003102	rab42a	100	97.706	ENSSLDG00000020354	rab42a	100	97.706	Seriola_lalandi_dorsalis
ENSACIG00000003102	rab42a	100	98.624	ENSSPAG00000016167	rab42a	100	98.624	Stegastes_partitus
ENSACIG00000003102	rab42a	100	96.330	ENSTRUG00000010224	rab42a	100	96.330	Takifugu_rubripes
ENSACIG00000003102	rab42a	100	95.413	ENSXCOG00000003428	rab42a	100	95.413	Xiphophorus_couchianus
ENSACIG00000003102	rab42a	100	95.413	ENSXMAG00000028376	rab42a	100	95.413	Xiphophorus_maculatus