EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000003147 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B (1 of many)
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 1342 bases
Position: chrCCOE01000925.1:500075-501416
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000003974	FDF	PF09532.10	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000004106	LSM14B (1 of many)-201	678	-	ENSACIP00000003974	225 (aa)	-	-

Gene Model

Click here to download ENSACIG00000003147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000003147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000003147	LSM14B	87	42.342	ENSACIG00000012266	lsm14b	59	43.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000003147	LSM14B	88	41.597	ENSG00000149657	LSM14B	62	41.909	Homo_sapiens
ENSACIG00000003147	LSM14B	87	41.597	ENSAPOG00000001780	lsm14b	61	40.984	Acanthochromis_polyacanthus
ENSACIG00000003147	LSM14B	87	41.597	ENSAOCG00000012380	lsm14b	61	42.213	Amphiprion_ocellaris
ENSACIG00000003147	LSM14B	97	51.311	ENSAOCG00000006667	LSM14B	63	50.199	Amphiprion_ocellaris
ENSACIG00000003147	LSM14B	87	41.256	ENSAPEG00000023633	lsm14b	61	44.348	Amphiprion_percula
ENSACIG00000003147	LSM14B	86	64.748	ENSATEG00000015895	LSM14B	82	47.970	Anabas_testudineus
ENSACIG00000003147	LSM14B	87	42.174	ENSATEG00000016603	lsm14b	61	43.220	Anabas_testudineus
ENSACIG00000003147	LSM14B	88	41.224	ENSACAG00000016195	LSM14B	62	43.145	Anolis_carolinensis
ENSACIG00000003147	LSM14B	88	41.772	ENSANAG00000037915	LSM14B	62	40.833	Aotus_nancymaae
ENSACIG00000003147	LSM14B	87	35.983	ENSACLG00000019663	lsm14b	61	39.592	Astatotilapia_calliptera
ENSACIG00000003147	LSM14B	90	48.780	ENSACLG00000011955	-	79	46.888	Astatotilapia_calliptera
ENSACIG00000003147	LSM14B	90	45.415	ENSACLG00000008384	-	77	44.196	Astatotilapia_calliptera
ENSACIG00000003147	LSM14B	90	51.220	ENSACLG00000019624	-	69	54.545	Astatotilapia_calliptera
ENSACIG00000003147	LSM14B	88	40.084	ENSCJAG00000014434	LSM14B	62	40.833	Callithrix_jacchus
ENSACIG00000003147	LSM14B	88	41.176	ENSCAFG00020022150	LSM14B	62	42.324	Canis_lupus_dingo
ENSACIG00000003147	LSM14B	88	40.833	ENSCHIG00000010284	-	62	41.975	Capra_hircus
ENSACIG00000003147	LSM14B	99	36.145	ENSCHIG00000022681	-	61	35.556	Capra_hircus
ENSACIG00000003147	LSM14B	88	41.772	ENSTSYG00000031914	LSM14B	62	43.333	Carlito_syrichta
ENSACIG00000003147	LSM14B	88	42.194	ENSCAPG00000013059	LSM14B	69	42.500	Cavia_aperea
ENSACIG00000003147	LSM14B	88	42.616	ENSCPOG00000038080	LSM14B	69	42.917	Cavia_porcellus
ENSACIG00000003147	LSM14B	88	42.194	ENSCCAG00000021267	LSM14B	62	41.250	Cebus_capucinus
ENSACIG00000003147	LSM14B	88	41.597	ENSCATG00000036006	LSM14B	62	41.494	Cercocebus_atys
ENSACIG00000003147	LSM14B	88	43.460	ENSCLAG00000003186	LSM14B	90	37.276	Chinchilla_lanigera
ENSACIG00000003147	LSM14B	88	41.597	ENSCANG00000036986	LSM14B	69	41.494	Colobus_angolensis_palliatus
ENSACIG00000003147	LSM14B	88	40.928	ENSCGRG00001018399	Lsm14b	62	40.833	Cricetulus_griseus_chok1gshd
ENSACIG00000003147	LSM14B	74	44.886	ENSCGRG00000002484	-	81	45.251	Cricetulus_griseus_crigri
ENSACIG00000003147	LSM14B	85	40.506	ENSCSEG00000004722	lsm14b	61	38.776	Cynoglossus_semilaevis
ENSACIG00000003147	LSM14B	50	43.860	ENSCSEG00000019080	-	69	45.902	Cynoglossus_semilaevis
ENSACIG00000003147	LSM14B	96	54.825	ENSCVAG00000012433	-	90	50.235	Cyprinodon_variegatus
ENSACIG00000003147	LSM14B	88	41.702	ENSDARG00000025386	lsm14b	62	42.797	Danio_rerio
ENSACIG00000003147	LSM14B	88	37.681	ENSDNOG00000025246	LSM14B	90	37.276	Dasypus_novemcinctus
ENSACIG00000003147	LSM14B	88	42.194	ENSDORG00000016683	Lsm14b	60	42.500	Dipodomys_ordii
ENSACIG00000003147	LSM14B	77	37.799	ENSETEG00000011188	-	89	37.981	Echinops_telfairi
ENSACIG00000003147	LSM14B	91	36.287	ENSETEG00000001869	-	62	34.043	Echinops_telfairi
ENSACIG00000003147	LSM14B	88	47.196	ENSEASG00005023218	LSM14B	88	47.465	Equus_asinus_asinus
ENSACIG00000003147	LSM14B	88	42.083	ENSECAG00000010659	LSM14B	62	42.798	Equus_caballus
ENSACIG00000003147	LSM14B	96	43.426	ENSELUG00000005780	lsm14b	62	41.736	Esox_lucius
ENSACIG00000003147	LSM14B	87	42.500	ENSELUG00000016299	LSM14B	62	42.276	Esox_lucius
ENSACIG00000003147	LSM14B	88	43.750	ENSFCAG00000003248	LSM14B	62	42.387	Felis_catus
ENSACIG00000003147	LSM14B	88	42.194	ENSFDAG00000002214	LSM14B	69	42.083	Fukomys_damarensis
ENSACIG00000003147	LSM14B	88	37.500	ENSFHEG00000006237	lsm14b	61	37.860	Fundulus_heteroclitus
ENSACIG00000003147	LSM14B	97	47.768	ENSGMOG00000017115	lsm14b	56	47.596	Gadus_morhua
ENSACIG00000003147	LSM14B	88	43.033	ENSGALG00000005125	LSM14B	62	42.105	Gallus_gallus
ENSACIG00000003147	LSM14B	100	58.772	ENSGAFG00000013723	LSM14B	89	59.024	Gambusia_affinis
ENSACIG00000003147	LSM14B	87	33.473	ENSGAFG00000020318	lsm14b	62	34.959	Gambusia_affinis
ENSACIG00000003147	LSM14B	88	43.154	ENSGACG00000009973	lsm14b	62	39.516	Gasterosteus_aculeatus
ENSACIG00000003147	LSM14B	74	38.095	ENSGAGG00000004106	LSM14B	71	37.356	Gopherus_agassizii
ENSACIG00000003147	LSM14B	88	41.597	ENSGGOG00000005630	LSM14B	65	41.909	Gorilla_gorilla
ENSACIG00000003147	LSM14B	88	41.772	ENSHGLG00000015055	LSM14B	62	42.083	Heterocephalus_glaber_female
ENSACIG00000003147	LSM14B	88	41.277	ENSHGLG00100015273	LSM14B	70	41.597	Heterocephalus_glaber_male
ENSACIG00000003147	LSM14B	100	48.718	ENSHCOG00000018747	LSM14B	64	47.791	Hippocampus_comes
ENSACIG00000003147	LSM14B	86	46.734	ENSHCOG00000004867	lsm14b	87	47.826	Hippocampus_comes
ENSACIG00000003147	LSM14B	87	43.460	ENSIPUG00000014946	lsm14b	59	44.444	Ictalurus_punctatus
ENSACIG00000003147	LSM14B	88	41.772	ENSSTOG00000020482	LSM14B	69	42.083	Ictidomys_tridecemlineatus
ENSACIG00000003147	LSM14B	88	41.772	ENSJJAG00000012728	Lsm14b	62	41.667	Jaculus_jaculus
ENSACIG00000003147	LSM14B	74	42.654	ENSKMAG00000012834	-	50	53.659	Kryptolebias_marmoratus
ENSACIG00000003147	LSM14B	97	57.798	ENSLBEG00000007951	LSM14B	88	59.901	Labrus_bergylta
ENSACIG00000003147	LSM14B	88	42.194	ENSLAFG00000007492	LSM14B	68	42.500	Loxodonta_africana
ENSACIG00000003147	LSM14B	88	41.597	ENSMFAG00000041479	LSM14B	62	41.494	Macaca_fascicularis
ENSACIG00000003147	LSM14B	88	41.597	ENSMMUG00000014084	LSM14B	62	41.494	Macaca_mulatta
ENSACIG00000003147	LSM14B	88	41.597	ENSMNEG00000045573	LSM14B	62	41.494	Macaca_nemestrina
ENSACIG00000003147	LSM14B	88	41.597	ENSMLEG00000040895	LSM14B	69	41.494	Mandrillus_leucophaeus
ENSACIG00000003147	LSM14B	97	52.107	ENSMAMG00000024124	LSM14B	62	49.590	Mastacembelus_armatus
ENSACIG00000003147	LSM14B	87	37.759	ENSMAMG00000020539	lsm14b	62	41.532	Mastacembelus_armatus
ENSACIG00000003147	LSM14B	90	56.154	ENSMZEG00005026001	LSM14B	65	55.512	Maylandia_zebra
ENSACIG00000003147	LSM14B	87	36.975	ENSMZEG00005000987	lsm14b	61	40.909	Maylandia_zebra
ENSACIG00000003147	LSM14B	90	45.188	ENSMZEG00005026087	-	67	49.741	Maylandia_zebra
ENSACIG00000003147	LSM14B	90	45.607	ENSMZEG00005002688	-	67	49.010	Maylandia_zebra
ENSACIG00000003147	LSM14B	88	43.388	ENSMGAG00000005300	LSM14B	68	42.105	Meleagris_gallopavo
ENSACIG00000003147	LSM14B	88	40.928	ENSMAUG00000020700	Lsm14b	62	40.833	Mesocricetus_auratus
ENSACIG00000003147	LSM14B	88	41.772	ENSMICG00000014675	LSM14B	62	42.917	Microcebus_murinus
ENSACIG00000003147	LSM14B	88	42.194	ENSMOCG00000020600	Lsm14b	62	43.750	Microtus_ochrogaster
ENSACIG00000003147	LSM14B	90	56.000	ENSMMOG00000017321	LSM14B	59	57.333	Mola_mola
ENSACIG00000003147	LSM14B	86	40.870	ENSMMOG00000020042	lsm14b	64	43.038	Mola_mola
ENSACIG00000003147	LSM14B	88	36.727	ENSMODG00000016690	LSM14B	90	37.770	Monodelphis_domestica
ENSACIG00000003147	LSM14B	96	45.022	ENSMALG00000004783	lsm14b	60	41.284	Monopterus_albus
ENSACIG00000003147	LSM14B	88	51.417	ENSMALG00000022251	LSM14B	62	51.012	Monopterus_albus
ENSACIG00000003147	LSM14B	88	43.038	MGP_CAROLIEiJ_G0024770	Lsm14b	62	42.083	Mus_caroli
ENSACIG00000003147	LSM14B	88	43.038	ENSMUSG00000039108	Lsm14b	62	42.083	Mus_musculus
ENSACIG00000003147	LSM14B	88	42.616	MGP_PahariEiJ_G0026214	Lsm14b	62	41.667	Mus_pahari
ENSACIG00000003147	LSM14B	88	43.038	MGP_SPRETEiJ_G0025693	Lsm14b	62	42.083	Mus_spretus
ENSACIG00000003147	LSM14B	86	39.914	ENSMLUG00000000304	LSM14B	62	41.909	Myotis_lucifugus
ENSACIG00000003147	LSM14B	56	50.388	ENSNGAG00000016550	Lsm14b	53	50.400	Nannospalax_galili
ENSACIG00000003147	LSM14B	88	41.597	ENSNLEG00000015757	LSM14B	69	41.494	Nomascus_leucogenys
ENSACIG00000003147	LSM14B	88	43.038	ENSODEG00000004099	LSM14B	90	36.918	Octodon_degus
ENSACIG00000003147	LSM14B	87	37.395	ENSONIG00000020318	lsm14b	63	39.600	Oreochromis_niloticus
ENSACIG00000003147	LSM14B	55	47.368	ENSOANG00000003370	LSM14B	52	46.212	Ornithorhynchus_anatinus
ENSACIG00000003147	LSM14B	88	42.194	ENSOCUG00000006279	LSM14B	69	42.083	Oryctolagus_cuniculus
ENSACIG00000003147	LSM14B	87	38.397	ENSORLG00000013525	lsm14b	61	39.669	Oryzias_latipes
ENSACIG00000003147	LSM14B	91	47.390	ENSORLG00000028353	LSM14B	62	44.939	Oryzias_latipes
ENSACIG00000003147	LSM14B	87	38.397	ENSORLG00020020553	lsm14b	61	39.669	Oryzias_latipes_hni
ENSACIG00000003147	LSM14B	91	47.917	ENSORLG00020018191	-	87	47.479	Oryzias_latipes_hni
ENSACIG00000003147	LSM14B	87	38.397	ENSORLG00015016862	lsm14b	61	39.669	Oryzias_latipes_hsok
ENSACIG00000003147	LSM14B	91	47.984	ENSORLG00015013157	LSM14B	62	45.528	Oryzias_latipes_hsok
ENSACIG00000003147	LSM14B	87	38.298	ENSOMEG00000023917	lsm14b	61	39.419	Oryzias_melastigma
ENSACIG00000003147	LSM14B	94	56.338	ENSOMEG00000000171	-	86	56.650	Oryzias_melastigma
ENSACIG00000003147	LSM14B	88	36.232	ENSOGAG00000003915	LSM14B	65	37.276	Otolemur_garnettii
ENSACIG00000003147	LSM14B	88	41.597	ENSPPAG00000035799	LSM14B	65	41.909	Pan_paniscus
ENSACIG00000003147	LSM14B	88	41.667	ENSPPRG00000009197	LSM14B	62	42.387	Panthera_pardus
ENSACIG00000003147	LSM14B	88	46.729	ENSPTIG00000021518	LSM14B	91	46.544	Panthera_tigris_altaica
ENSACIG00000003147	LSM14B	88	41.597	ENSPTRG00000013696	LSM14B	62	41.909	Pan_troglodytes
ENSACIG00000003147	LSM14B	88	41.597	ENSPANG00000011747	LSM14B	62	41.494	Papio_anubis
ENSACIG00000003147	LSM14B	88	41.304	ENSPKIG00000003275	lsm14b	61	40.773	Paramormyrops_kingsleyae
ENSACIG00000003147	LSM14B	88	39.271	ENSPSIG00000014762	LSM14B	69	40.800	Pelodiscus_sinensis
ENSACIG00000003147	LSM14B	88	41.350	ENSPEMG00000017688	Lsm14b	62	41.250	Peromyscus_maniculatus_bairdii
ENSACIG00000003147	LSM14B	88	43.220	ENSPCIG00000013405	LSM14B	61	43.933	Phascolarctos_cinereus
ENSACIG00000003147	LSM14B	92	39.271	ENSPFOG00000005631	lsm14b	62	37.449	Poecilia_formosa
ENSACIG00000003147	LSM14B	86	48.718	ENSPLAG00000005793	LSM14B	61	47.280	Poecilia_latipinna
ENSACIG00000003147	LSM14B	92	40.726	ENSPLAG00000002449	lsm14b	62	38.272	Poecilia_latipinna
ENSACIG00000003147	LSM14B	85	48.276	ENSPMEG00000022953	LSM14B	61	47.699	Poecilia_mexicana
ENSACIG00000003147	LSM14B	88	39.834	ENSPMEG00000000745	lsm14b	62	37.449	Poecilia_mexicana
ENSACIG00000003147	LSM14B	90	52.991	ENSPREG00000007828	LSM14B	89	52.564	Poecilia_reticulata
ENSACIG00000003147	LSM14B	88	42.194	ENSPCOG00000013625	LSM14B	62	43.333	Propithecus_coquereli
ENSACIG00000003147	LSM14B	87	47.115	ENSPNAG00000012777	lsm14b	59	47.196	Pygocentrus_nattereri
ENSACIG00000003147	LSM14B	88	41.597	ENSRBIG00000033461	LSM14B	68	41.909	Rhinopithecus_bieti
ENSACIG00000003147	LSM14B	88	41.597	ENSRROG00000042949	LSM14B	90	35.714	Rhinopithecus_roxellana
ENSACIG00000003147	LSM14B	88	40.084	ENSSBOG00000032820	LSM14B	69	40.833	Saimiri_boliviensis_boliviensis
ENSACIG00000003147	LSM14B	88	42.616	ENSSHAG00000015528	LSM14B	90	37.634	Sarcophilus_harrisii
ENSACIG00000003147	LSM14B	87	40.586	ENSSMAG00000012725	lsm14b	62	41.633	Scophthalmus_maximus
ENSACIG00000003147	LSM14B	97	51.128	ENSSMAG00000000135	LSM14B	63	50.800	Scophthalmus_maximus
ENSACIG00000003147	LSM14B	87	36.626	ENSSDUG00000020977	lsm14b	62	36.179	Seriola_dumerili
ENSACIG00000003147	LSM14B	90	54.656	ENSSDUG00000022770	LSM14B	63	54.656	Seriola_dumerili
ENSACIG00000003147	LSM14B	100	49.492	ENSSLDG00000011354	-	90	50.579	Seriola_lalandi_dorsalis
ENSACIG00000003147	LSM14B	78	38.605	ENSSARG00000007749	-	55	47.500	Sorex_araneus
ENSACIG00000003147	LSM14B	88	34.155	ENSSPUG00000014360	LSM14B	60	39.556	Sphenodon_punctatus
ENSACIG00000003147	LSM14B	97	49.612	ENSSPAG00000018854	-	90	47.325	Stegastes_partitus
ENSACIG00000003147	LSM14B	87	43.056	ENSSPAG00000020915	lsm14b	59	46.188	Stegastes_partitus
ENSACIG00000003147	LSM14B	88	40.161	ENSTGUG00000007884	LSM14B	69	43.852	Taeniopygia_guttata
ENSACIG00000003147	LSM14B	92	40.081	ENSTRUG00000011354	lsm14b	61	38.683	Takifugu_rubripes
ENSACIG00000003147	LSM14B	90	48.374	ENSTRUG00000001529	LSM14B	62	50.813	Takifugu_rubripes
ENSACIG00000003147	LSM14B	88	39.419	ENSTNIG00000002445	lsm14b	62	40.249	Tetraodon_nigroviridis
ENSACIG00000003147	LSM14B	88	41.250	ENSUAMG00000025298	LSM14B	62	42.387	Ursus_americanus
ENSACIG00000003147	LSM14B	88	41.250	ENSUMAG00000000480	LSM14B	62	42.387	Ursus_maritimus
ENSACIG00000003147	LSM14B	88	41.176	ENSVVUG00000015920	LSM14B	90	40.157	Vulpes_vulpes
ENSACIG00000003147	LSM14B	77	35.780	ENSXETG00000001997	lsm14b	63	36.239	Xenopus_tropicalis
ENSACIG00000003147	LSM14B	87	36.017	ENSXMAG00000010013	lsm14b	61	36.626	Xiphophorus_maculatus