EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000003551 (Gene tree)
Gene ID: -
Gene Symbol: snd1
Alias: SN4TDR|TDRD11|p100L|p100S|wu:fc27g10
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 172601 bases
Position: chrCCOE01000037.1:1320456-1493056
Accession: ZDB-GENE-030131-3124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000004532	TUDOR	PF00567.24	4.5e-26	1	1
ENSACIP00000004532	SNase	PF00565.17	7.8e-65	1	4
ENSACIP00000004532	SNase	PF00565.17	7.8e-65	2	4
ENSACIP00000004532	SNase	PF00565.17	7.8e-65	3	4
ENSACIP00000004532	SNase	PF00565.17	7.8e-65	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000004676	-	2661	-	ENSACIP00000004532	886 (aa)	-	-

Gene Model

Click here to download ENSACIG00000003551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000003551's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000003551	snd1	99	81.849	ENSG00000197157	SND1	98	81.971	Homo_sapiens
ENSACIG00000003551	snd1	100	93.304	ENSAPOG00000017599	snd1	100	93.304	Acanthochromis_polyacanthus
ENSACIG00000003551	snd1	100	81.051	ENSAMEG00000004664	SND1	93	82.011	Ailuropoda_melanoleuca
ENSACIG00000003551	snd1	100	93.304	ENSAOCG00000014166	snd1	100	93.304	Amphiprion_ocellaris
ENSACIG00000003551	snd1	100	93.304	ENSAPEG00000007067	snd1	100	93.304	Amphiprion_percula
ENSACIG00000003551	snd1	98	92.394	ENSATEG00000018475	snd1	89	92.394	Anabas_testudineus
ENSACIG00000003551	snd1	99	81.960	ENSANAG00000034463	SND1	99	82.034	Aotus_nancymaae
ENSACIG00000003551	snd1	100	92.645	ENSACLG00000022897	snd1	100	92.645	Astatotilapia_calliptera
ENSACIG00000003551	snd1	99	87.363	ENSAMXG00000016318	snd1	99	87.363	Astyanax_mexicanus
ENSACIG00000003551	snd1	99	82.183	ENSBTAG00000010692	SND1	98	82.307	Bos_taurus
ENSACIG00000003551	snd1	99	45.838	WBGene00006626	tsn-1	97	46.374	Caenorhabditis_elegans
ENSACIG00000003551	snd1	99	81.737	ENSCJAG00000017668	SND1	99	81.808	Callithrix_jacchus
ENSACIG00000003551	snd1	100	81.229	ENSCAFG00000001700	SND1	98	82.195	Canis_familiaris
ENSACIG00000003551	snd1	100	81.229	ENSCAFG00020021639	SND1	98	82.195	Canis_lupus_dingo
ENSACIG00000003551	snd1	99	82.071	ENSCHIG00000023390	SND1	98	82.195	Capra_hircus
ENSACIG00000003551	snd1	69	83.128	ENSTSYG00000004979	SND1	96	83.128	Carlito_syrichta
ENSACIG00000003551	snd1	97	76.620	ENSCAPG00000010677	SND1	97	76.620	Cavia_aperea
ENSACIG00000003551	snd1	99	81.849	ENSCPOG00000006251	SND1	98	81.971	Cavia_porcellus
ENSACIG00000003551	snd1	99	81.960	ENSCCAG00000036847	SND1	98	82.083	Cebus_capucinus
ENSACIG00000003551	snd1	99	82.071	ENSCATG00000035214	SND1	99	82.147	Cercocebus_atys
ENSACIG00000003551	snd1	99	81.960	ENSCLAG00000011796	SND1	98	82.083	Chinchilla_lanigera
ENSACIG00000003551	snd1	99	82.071	ENSCSAG00000010182	SND1	98	82.195	Chlorocebus_sabaeus
ENSACIG00000003551	snd1	77	78.218	ENSCHOG00000002218	SND1	86	78.218	Choloepus_hoffmanni
ENSACIG00000003551	snd1	100	81.319	ENSCPBG00000018094	SND1	98	82.307	Chrysemys_picta_bellii
ENSACIG00000003551	snd1	98	55.150	ENSCING00000000524	-	98	55.150	Ciona_intestinalis
ENSACIG00000003551	snd1	99	55.203	ENSCSAVG00000008807	-	98	55.754	Ciona_savignyi
ENSACIG00000003551	snd1	99	82.071	ENSCANG00000035119	SND1	98	82.195	Colobus_angolensis_palliatus
ENSACIG00000003551	snd1	99	81.737	ENSCGRG00001022514	Snd1	98	81.859	Cricetulus_griseus_chok1gshd
ENSACIG00000003551	snd1	97	81.808	ENSCGRG00000012277	Snd1	99	81.808	Cricetulus_griseus_crigri
ENSACIG00000003551	snd1	100	90.340	ENSCSEG00000008661	snd1	100	90.340	Cynoglossus_semilaevis
ENSACIG00000003551	snd1	100	92.536	ENSCVAG00000010316	snd1	100	92.536	Cyprinodon_variegatus
ENSACIG00000003551	snd1	100	86.418	ENSDARG00000006766	snd1	98	87.486	Danio_rerio
ENSACIG00000003551	snd1	97	79.842	ENSDNOG00000006795	SND1	100	79.842	Dasypus_novemcinctus
ENSACIG00000003551	snd1	99	81.849	ENSDORG00000000336	Snd1	98	81.971	Dipodomys_ordii
ENSACIG00000003551	snd1	98	49.296	FBgn0035121	Tudor-SN	97	49.453	Drosophila_melanogaster
ENSACIG00000003551	snd1	90	91.667	ENSETEG00000000375	SND1	92	91.667	Echinops_telfairi
ENSACIG00000003551	snd1	59	59.318	ENSEBUG00000014201	-	84	65.027	Eptatretus_burgeri
ENSACIG00000003551	snd1	99	80.635	ENSEASG00005008513	SND1	98	80.748	Equus_asinus_asinus
ENSACIG00000003551	snd1	99	81.960	ENSECAG00000011451	SND1	98	82.083	Equus_caballus
ENSACIG00000003551	snd1	100	71.679	ENSEEUG00000014737	SND1	98	72.452	Erinaceus_europaeus
ENSACIG00000003551	snd1	99	86.154	ENSELUG00000001805	snd1	96	86.154	Esox_lucius
ENSACIG00000003551	snd1	100	81.120	ENSFCAG00000008289	SND1	98	82.083	Felis_catus
ENSACIG00000003551	snd1	98	81.747	ENSFDAG00000015881	SND1	98	81.747	Fukomys_damarensis
ENSACIG00000003551	snd1	100	90.118	ENSFHEG00000004093	snd1	99	91.581	Fundulus_heteroclitus
ENSACIG00000003551	snd1	73	84.181	ENSGMOG00000018932	snd1	66	84.181	Gadus_morhua
ENSACIG00000003551	snd1	100	92.426	ENSGAFG00000008421	snd1	100	92.426	Gambusia_affinis
ENSACIG00000003551	snd1	100	62.050	ENSGACG00000019793	snd1	100	62.050	Gasterosteus_aculeatus
ENSACIG00000003551	snd1	99	82.071	ENSGGOG00000009614	SND1	99	82.147	Gorilla_gorilla
ENSACIG00000003551	snd1	100	92.536	ENSHBUG00000019135	snd1	100	92.426	Haplochromis_burtoni
ENSACIG00000003551	snd1	99	81.626	ENSHGLG00000003618	SND1	98	81.747	Heterocephalus_glaber_female
ENSACIG00000003551	snd1	99	81.126	ENSHGLG00100012449	SND1	99	81.747	Heterocephalus_glaber_male
ENSACIG00000003551	snd1	100	89.682	ENSHCOG00000005266	snd1	100	89.682	Hippocampus_comes
ENSACIG00000003551	snd1	99	85.950	ENSIPUG00000013279	snd1	99	85.950	Ictalurus_punctatus
ENSACIG00000003551	snd1	99	81.960	ENSSTOG00000002140	SND1	98	82.083	Ictidomys_tridecemlineatus
ENSACIG00000003551	snd1	99	81.960	ENSJJAG00000009561	Snd1	98	82.083	Jaculus_jaculus
ENSACIG00000003551	snd1	100	92.536	ENSKMAG00000016997	snd1	100	92.536	Kryptolebias_marmoratus
ENSACIG00000003551	snd1	100	90.889	ENSLBEG00000013563	snd1	100	90.889	Labrus_bergylta
ENSACIG00000003551	snd1	99	85.777	ENSLOCG00000015537	snd1	98	85.936	Lepisosteus_oculatus
ENSACIG00000003551	snd1	100	81.449	ENSLAFG00000009696	SND1	98	82.419	Loxodonta_africana
ENSACIG00000003551	snd1	99	82.071	ENSMFAG00000038114	SND1	99	82.147	Macaca_fascicularis
ENSACIG00000003551	snd1	99	82.071	ENSMMUG00000015432	SND1	98	82.195	Macaca_mulatta
ENSACIG00000003551	snd1	99	82.071	ENSMNEG00000039808	SND1	100	82.167	Macaca_nemestrina
ENSACIG00000003551	snd1	99	81.960	ENSMLEG00000029040	SND1	100	82.054	Mandrillus_leucophaeus
ENSACIG00000003551	snd1	100	92.206	ENSMAMG00000011739	snd1	100	92.206	Mastacembelus_armatus
ENSACIG00000003551	snd1	100	92.645	ENSMZEG00005005681	snd1	100	92.645	Maylandia_zebra
ENSACIG00000003551	snd1	99	81.960	ENSMICG00000000097	SND1	98	82.083	Microcebus_murinus
ENSACIG00000003551	snd1	99	82.183	ENSMOCG00000005040	Snd1	98	82.307	Microtus_ochrogaster
ENSACIG00000003551	snd1	100	91.548	ENSMMOG00000001795	snd1	100	91.548	Mola_mola
ENSACIG00000003551	snd1	99	81.292	ENSMODG00000015182	SND1	98	81.411	Monodelphis_domestica
ENSACIG00000003551	snd1	100	91.987	ENSMALG00000012071	snd1	100	91.987	Monopterus_albus
ENSACIG00000003551	snd1	98	81.859	MGP_CAROLIEiJ_G0028159	Snd1	98	81.859	Mus_caroli
ENSACIG00000003551	snd1	98	81.635	ENSMUSG00000001424	Snd1	98	81.635	Mus_musculus
ENSACIG00000003551	snd1	98	81.859	MGP_PahariEiJ_G0021917	Snd1	98	81.859	Mus_pahari
ENSACIG00000003551	snd1	98	81.859	MGP_SPRETEiJ_G0029159	Snd1	98	81.859	Mus_spretus
ENSACIG00000003551	snd1	100	81.010	ENSMPUG00000006545	SND1	98	81.971	Mustela_putorius_furo
ENSACIG00000003551	snd1	97	80.915	ENSMLUG00000017130	SND1	99	80.915	Myotis_lucifugus
ENSACIG00000003551	snd1	99	81.849	ENSNGAG00000011186	Snd1	98	81.971	Nannospalax_galili
ENSACIG00000003551	snd1	100	92.645	ENSNBRG00000006681	snd1	100	92.645	Neolamprologus_brichardi
ENSACIG00000003551	snd1	100	81.229	ENSNLEG00000012263	SND1	100	82.167	Nomascus_leucogenys
ENSACIG00000003551	snd1	91	91.667	ENSOPRG00000013405	SND1	90	91.667	Ochotona_princeps
ENSACIG00000003551	snd1	99	82.071	ENSODEG00000011502	SND1	98	82.195	Octodon_degus
ENSACIG00000003551	snd1	100	92.536	ENSONIG00000011481	snd1	97	92.536	Oreochromis_niloticus
ENSACIG00000003551	snd1	98	81.440	ENSOANG00000000817	SND1	98	81.440	Ornithorhynchus_anatinus
ENSACIG00000003551	snd1	100	80.461	ENSOCUG00000001620	SND1	98	81.411	Oryctolagus_cuniculus
ENSACIG00000003551	snd1	100	90.779	ENSORLG00000015201	snd1	100	90.779	Oryzias_latipes
ENSACIG00000003551	snd1	100	90.999	ENSORLG00020013991	snd1	100	90.999	Oryzias_latipes_hni
ENSACIG00000003551	snd1	100	90.999	ENSORLG00015012436	snd1	100	90.999	Oryzias_latipes_hsok
ENSACIG00000003551	snd1	100	91.328	ENSOMEG00000006406	snd1	100	91.328	Oryzias_melastigma
ENSACIG00000003551	snd1	99	81.889	ENSOGAG00000013356	SND1	92	82.011	Otolemur_garnettii
ENSACIG00000003551	snd1	97	79.797	ENSOARG00000002149	SND1	100	79.797	Ovis_aries
ENSACIG00000003551	snd1	99	81.960	ENSPPAG00000042947	SND1	99	82.034	Pan_paniscus
ENSACIG00000003551	snd1	100	81.120	ENSPPRG00000004494	SND1	98	82.083	Panthera_pardus
ENSACIG00000003551	snd1	100	81.010	ENSPTIG00000014214	SND1	98	81.971	Panthera_tigris_altaica
ENSACIG00000003551	snd1	99	81.960	ENSPTRG00000023911	SND1	99	82.034	Pan_troglodytes
ENSACIG00000003551	snd1	97	82.147	ENSPANG00000011997	SND1	99	82.147	Papio_anubis
ENSACIG00000003551	snd1	99	84.564	ENSPKIG00000023494	snd1	98	84.795	Paramormyrops_kingsleyae
ENSACIG00000003551	snd1	92	90.670	ENSPMGG00000003629	snd1	100	90.670	Periophthalmus_magnuspinnatus
ENSACIG00000003551	snd1	99	81.960	ENSPEMG00000010240	Snd1	98	82.083	Peromyscus_maniculatus_bairdii
ENSACIG00000003551	snd1	97	72.203	ENSPMAG00000007915	-	99	72.203	Petromyzon_marinus
ENSACIG00000003551	snd1	99	81.849	ENSPCIG00000011561	SND1	98	81.971	Phascolarctos_cinereus
ENSACIG00000003551	snd1	100	91.987	ENSPFOG00000001557	snd1	100	91.987	Poecilia_formosa
ENSACIG00000003551	snd1	100	91.987	ENSPLAG00000018459	snd1	97	91.987	Poecilia_latipinna
ENSACIG00000003551	snd1	100	92.206	ENSPMEG00000006803	snd1	100	92.206	Poecilia_mexicana
ENSACIG00000003551	snd1	100	92.206	ENSPREG00000002189	snd1	100	92.206	Poecilia_reticulata
ENSACIG00000003551	snd1	91	91.667	ENSPPYG00000017972	SND1	98	91.667	Pongo_abelii
ENSACIG00000003551	snd1	100	74.314	ENSPCAG00000011305	SND1	98	75.140	Procavia_capensis
ENSACIG00000003551	snd1	99	82.071	ENSPCOG00000026791	SND1	100	82.167	Propithecus_coquereli
ENSACIG00000003551	snd1	99	79.844	ENSPVAG00000013945	SND1	98	79.955	Pteropus_vampyrus
ENSACIG00000003551	snd1	100	92.536	ENSPNYG00000000932	snd1	100	92.536	Pundamilia_nyererei
ENSACIG00000003551	snd1	99	87.473	ENSPNAG00000001206	snd1	99	87.473	Pygocentrus_nattereri
ENSACIG00000003551	snd1	98	81.635	ENSRNOG00000031173	Snd1	100	80.813	Rattus_norvegicus
ENSACIG00000003551	snd1	69	83.302	ENSRBIG00000027782	-	93	83.302	Rhinopithecus_bieti
ENSACIG00000003551	snd1	99	82.071	ENSRROG00000033020	SND1	98	82.195	Rhinopithecus_roxellana
ENSACIG00000003551	snd1	99	81.960	ENSSBOG00000032461	SND1	99	82.034	Saimiri_boliviensis_boliviensis
ENSACIG00000003551	snd1	98	78.515	ENSSHAG00000015359	SND1	100	78.515	Sarcophilus_harrisii
ENSACIG00000003551	snd1	98	85.477	ENSSFOG00015001103	snd1	98	85.477	Scleropages_formosus
ENSACIG00000003551	snd1	100	91.438	ENSSMAG00000001932	snd1	95	91.438	Scophthalmus_maximus
ENSACIG00000003551	snd1	100	93.194	ENSSDUG00000002699	snd1	94	93.194	Seriola_dumerili
ENSACIG00000003551	snd1	100	85.730	ENSSLDG00000001950	snd1	100	85.730	Seriola_lalandi_dorsalis
ENSACIG00000003551	snd1	86	77.358	ENSSARG00000004877	SND1	92	77.358	Sorex_araneus
ENSACIG00000003551	snd1	69	76.736	ENSSPUG00000017586	SND1	96	76.736	Sphenodon_punctatus
ENSACIG00000003551	snd1	72	90.832	ENSSPAG00000021398	snd1	99	90.832	Stegastes_partitus
ENSACIG00000003551	snd1	99	81.849	ENSSSCG00000016590	SND1	98	81.971	Sus_scrofa
ENSACIG00000003551	snd1	100	88.571	ENSTRUG00000014067	snd1	100	88.474	Takifugu_rubripes
ENSACIG00000003551	snd1	100	89.352	ENSTNIG00000011019	snd1	100	89.352	Tetraodon_nigroviridis
ENSACIG00000003551	snd1	93	76.090	ENSTBEG00000003999	SND1	100	76.090	Tupaia_belangeri
ENSACIG00000003551	snd1	99	77.728	ENSTTRG00000006059	SND1	98	77.828	Tursiops_truncatus
ENSACIG00000003551	snd1	67	75.645	ENSUAMG00000002820	-	76	77.946	Ursus_americanus
ENSACIG00000003551	snd1	90	83.840	ENSUAMG00000005604	-	93	83.840	Ursus_americanus
ENSACIG00000003551	snd1	100	81.010	ENSUMAG00000005960	SND1	98	82.083	Ursus_maritimus
ENSACIG00000003551	snd1	77	91.667	ENSVPAG00000008302	SND1	74	91.667	Vicugna_pacos
ENSACIG00000003551	snd1	100	81.120	ENSVVUG00000007226	SND1	98	82.083	Vulpes_vulpes
ENSACIG00000003551	snd1	97	78.104	ENSXETG00000023043	snd1	100	78.057	Xenopus_tropicalis
ENSACIG00000003551	snd1	92	89.549	ENSXCOG00000013629	snd1	99	89.549	Xiphophorus_couchianus
ENSACIG00000003551	snd1	100	92.865	ENSXMAG00000011469	snd1	100	92.865	Xiphophorus_maculatus