EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000003617 (Gene tree)
Gene ID: -
Gene Symbol: rpp40
Alias: Rpp40|rpp40l|zgc:86704
Full Name: ribonuclease P/MRP 40 subunit
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 4909 bases
Position: chrCCOE01001362.1:194052-198960
Accession: ZDB-GENE-040625-161
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000004711	Ribonuc_P_40	PF08584.11	6.5e-66	1	2
ENSACIP00000004711	Ribonuc_P_40	PF08584.11	6.5e-66	2	2
ENSACIP00000004726	Ribonuc_P_40	PF08584.11	2.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000004859	-	1008	-	ENSACIP00000004711	335 (aa)	-	-
ENSACIT00000004875	-	976	-	ENSACIP00000004726	325 (aa)	-	-

Gene Model

Click here to download ENSACIG00000003617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000003617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000003617	rpp40	98	36.464	ENSG00000124787	RPP40	98	36.964	Homo_sapiens
ENSACIG00000003617	rpp40	88	58.842	ENSAPOG00000008660	rpp40	92	58.842	Acanthochromis_polyacanthus
ENSACIG00000003617	rpp40	98	37.569	ENSAMEG00000012938	RPP40	98	37.569	Ailuropoda_melanoleuca
ENSACIG00000003617	rpp40	99	70.520	ENSAOCG00000011846	rpp40	99	70.809	Amphiprion_ocellaris
ENSACIG00000003617	rpp40	99	70.520	ENSAPEG00000001322	rpp40	99	70.809	Amphiprion_percula
ENSACIG00000003617	rpp40	99	66.954	ENSATEG00000006584	rpp40	99	66.954	Anabas_testudineus
ENSACIG00000003617	rpp40	81	36.601	ENSAPLG00000005691	RPP40	99	36.601	Anas_platyrhynchos
ENSACIG00000003617	rpp40	99	35.813	ENSACAG00000006550	RPP40	89	35.813	Anolis_carolinensis
ENSACIG00000003617	rpp40	98	35.359	ENSANAG00000029246	RPP40	98	35.359	Aotus_nancymaae
ENSACIG00000003617	rpp40	98	76.437	ENSACLG00000015883	rpp40	97	77.326	Astatotilapia_calliptera
ENSACIG00000003617	rpp40	99	43.944	ENSAMXG00000001755	rpp40	99	43.944	Astyanax_mexicanus
ENSACIG00000003617	rpp40	98	37.845	ENSBTAG00000003332	RPP40	98	37.845	Bos_taurus
ENSACIG00000003617	rpp40	98	36.188	ENSCJAG00000021373	RPP40	98	36.188	Callithrix_jacchus
ENSACIG00000003617	rpp40	98	36.975	ENSCAFG00000009435	RPP40	98	36.975	Canis_familiaris
ENSACIG00000003617	rpp40	98	36.975	ENSCAFG00020013380	RPP40	98	36.975	Canis_lupus_dingo
ENSACIG00000003617	rpp40	98	37.119	ENSCHIG00000016849	RPP40	99	37.049	Capra_hircus
ENSACIG00000003617	rpp40	98	36.134	ENSTSYG00000032857	RPP40	98	36.134	Carlito_syrichta
ENSACIG00000003617	rpp40	88	32.609	ENSCAPG00000004957	RPP40	96	32.609	Cavia_aperea
ENSACIG00000003617	rpp40	98	36.415	ENSCPOG00000005855	RPP40	98	36.415	Cavia_porcellus
ENSACIG00000003617	rpp40	98	36.313	ENSCCAG00000019809	RPP40	98	36.313	Cebus_capucinus
ENSACIG00000003617	rpp40	98	36.188	ENSCATG00000038787	RPP40	98	36.188	Cercocebus_atys
ENSACIG00000003617	rpp40	98	37.255	ENSCLAG00000003235	RPP40	98	37.255	Chinchilla_lanigera
ENSACIG00000003617	rpp40	98	36.464	ENSCSAG00000007307	RPP40	98	36.464	Chlorocebus_sabaeus
ENSACIG00000003617	rpp40	99	36.757	ENSCPBG00000009003	RPP40	99	36.757	Chrysemys_picta_bellii
ENSACIG00000003617	rpp40	98	36.188	ENSCANG00000033965	RPP40	98	36.188	Colobus_angolensis_palliatus
ENSACIG00000003617	rpp40	97	35.376	ENSCGRG00001018328	Rpp40	98	35.376	Cricetulus_griseus_chok1gshd
ENSACIG00000003617	rpp40	97	35.376	ENSCGRG00000011344	Rpp40	98	35.376	Cricetulus_griseus_crigri
ENSACIG00000003617	rpp40	99	54.310	ENSCSEG00000015006	-	99	54.598	Cynoglossus_semilaevis
ENSACIG00000003617	rpp40	72	53.516	ENSCVAG00000012169	rpp40	100	54.297	Cyprinodon_variegatus
ENSACIG00000003617	rpp40	99	47.486	ENSDARG00000017605	rpp40	99	47.486	Danio_rerio
ENSACIG00000003617	rpp40	68	39.004	ENSDNOG00000048136	RPP40	81	39.004	Dasypus_novemcinctus
ENSACIG00000003617	rpp40	98	36.695	ENSDORG00000029944	-	98	36.695	Dipodomys_ordii
ENSACIG00000003617	rpp40	98	30.790	ENSDORG00000011196	-	98	30.790	Dipodomys_ordii
ENSACIG00000003617	rpp40	50	33.333	ENSETEG00000007458	RPP40	50	33.333	Echinops_telfairi
ENSACIG00000003617	rpp40	98	36.620	ENSEBUG00000000386	rpp40	99	37.072	Eptatretus_burgeri
ENSACIG00000003617	rpp40	98	37.151	ENSEASG00005012116	RPP40	79	37.151	Equus_asinus_asinus
ENSACIG00000003617	rpp40	98	37.709	ENSECAG00000017247	RPP40	79	37.709	Equus_caballus
ENSACIG00000003617	rpp40	98	47.922	ENSELUG00000017004	rpp40	99	47.922	Esox_lucius
ENSACIG00000003617	rpp40	98	37.709	ENSFCAG00000009249	RPP40	98	37.709	Felis_catus
ENSACIG00000003617	rpp40	84	36.667	ENSFALG00000013166	RPP40	99	36.667	Ficedula_albicollis
ENSACIG00000003617	rpp40	79	30.822	ENSFDAG00000000265	-	99	30.822	Fukomys_damarensis
ENSACIG00000003617	rpp40	98	37.151	ENSFDAG00000013001	-	98	37.151	Fukomys_damarensis
ENSACIG00000003617	rpp40	99	64.326	ENSFHEG00000021429	rpp40	88	65.057	Fundulus_heteroclitus
ENSACIG00000003617	rpp40	88	44.951	ENSGMOG00000018653	rpp40	100	44.951	Gadus_morhua
ENSACIG00000003617	rpp40	99	36.438	ENSGALG00000036074	RPP40	99	36.438	Gallus_gallus
ENSACIG00000003617	rpp40	82	56.794	ENSGAFG00000004189	-	100	56.794	Gambusia_affinis
ENSACIG00000003617	rpp40	99	66.857	ENSGACG00000002472	rpp40	99	66.857	Gasterosteus_aculeatus
ENSACIG00000003617	rpp40	99	37.027	ENSGAGG00000012918	RPP40	99	37.027	Gopherus_agassizii
ENSACIG00000003617	rpp40	98	36.464	ENSGGOG00000013764	RPP40	98	36.464	Gorilla_gorilla
ENSACIG00000003617	rpp40	88	75.410	ENSHBUG00000009378	rpp40	92	75.410	Haplochromis_burtoni
ENSACIG00000003617	rpp40	98	37.815	ENSHGLG00000004871	RPP40	98	37.815	Heterocephalus_glaber_female
ENSACIG00000003617	rpp40	98	37.815	ENSHGLG00100002080	RPP40	98	37.815	Heterocephalus_glaber_male
ENSACIG00000003617	rpp40	97	47.740	ENSHCOG00000013264	-	94	47.740	Hippocampus_comes
ENSACIG00000003617	rpp40	99	45.787	ENSIPUG00000008951	RPP40	99	45.787	Ictalurus_punctatus
ENSACIG00000003617	rpp40	98	37.989	ENSSTOG00000011199	RPP40	98	37.989	Ictidomys_tridecemlineatus
ENSACIG00000003617	rpp40	98	37.360	ENSJJAG00000020629	Rpp40	98	37.360	Jaculus_jaculus
ENSACIG00000003617	rpp40	99	69.075	ENSKMAG00000019358	rpp40	99	69.253	Kryptolebias_marmoratus
ENSACIG00000003617	rpp40	99	69.231	ENSLBEG00000022724	rpp40	99	69.516	Labrus_bergylta
ENSACIG00000003617	rpp40	99	38.162	ENSLACG00000014848	RPP40	99	38.162	Latimeria_chalumnae
ENSACIG00000003617	rpp40	99	42.737	ENSLOCG00000011650	rpp40	99	42.737	Lepisosteus_oculatus
ENSACIG00000003617	rpp40	81	37.294	ENSLAFG00000007530	RPP40	98	37.294	Loxodonta_africana
ENSACIG00000003617	rpp40	98	35.912	ENSMFAG00000043100	RPP40	98	35.912	Macaca_fascicularis
ENSACIG00000003617	rpp40	98	35.912	ENSMMUG00000004966	RPP40	98	35.912	Macaca_mulatta
ENSACIG00000003617	rpp40	98	35.912	ENSMNEG00000041986	RPP40	98	36.304	Macaca_nemestrina
ENSACIG00000003617	rpp40	98	31.215	ENSMLEG00000040851	RPP40	99	36.538	Mandrillus_leucophaeus
ENSACIG00000003617	rpp40	99	71.143	ENSMAMG00000019551	rpp40	99	71.143	Mastacembelus_armatus
ENSACIG00000003617	rpp40	99	77.429	ENSMZEG00005019475	rpp40	100	77.429	Maylandia_zebra
ENSACIG00000003617	rpp40	88	38.226	ENSMGAG00000004009	RPP40	89	38.226	Meleagris_gallopavo
ENSACIG00000003617	rpp40	98	36.188	ENSMAUG00000010268	Rpp40	98	36.188	Mesocricetus_auratus
ENSACIG00000003617	rpp40	98	38.095	ENSMICG00000003297	RPP40	98	34.454	Microcebus_murinus
ENSACIG00000003617	rpp40	98	37.255	ENSMOCG00000000305	Rpp40	98	37.255	Microtus_ochrogaster
ENSACIG00000003617	rpp40	99	58.683	ENSMMOG00000020591	-	99	58.683	Mola_mola
ENSACIG00000003617	rpp40	98	35.537	ENSMODG00000009826	RPP40	98	35.537	Monodelphis_domestica
ENSACIG00000003617	rpp40	99	73.121	ENSMALG00000020133	rpp40	99	73.121	Monopterus_albus
ENSACIG00000003617	rpp40	98	36.975	MGP_CAROLIEiJ_G0018429	Rpp40	98	36.975	Mus_caroli
ENSACIG00000003617	rpp40	98	36.695	ENSMUSG00000021418	Rpp40	98	36.695	Mus_musculus
ENSACIG00000003617	rpp40	98	37.255	MGP_PahariEiJ_G0019497	Rpp40	98	37.255	Mus_pahari
ENSACIG00000003617	rpp40	98	37.255	MGP_SPRETEiJ_G0019309	Rpp40	98	37.255	Mus_spretus
ENSACIG00000003617	rpp40	98	37.119	ENSMPUG00000000530	RPP40	92	37.119	Mustela_putorius_furo
ENSACIG00000003617	rpp40	98	39.106	ENSMLUG00000000501	RPP40	98	39.106	Myotis_lucifugus
ENSACIG00000003617	rpp40	98	36.188	ENSNGAG00000023955	-	98	36.188	Nannospalax_galili
ENSACIG00000003617	rpp40	93	33.236	ENSNGAG00000022529	-	98	33.236	Nannospalax_galili
ENSACIG00000003617	rpp40	87	67.937	ENSNBRG00000017465	rpp40	86	69.206	Neolamprologus_brichardi
ENSACIG00000003617	rpp40	98	36.740	ENSNLEG00000034397	RPP40	98	36.740	Nomascus_leucogenys
ENSACIG00000003617	rpp40	98	32.773	ENSMEUG00000005300	RPP40	98	32.773	Notamacropus_eugenii
ENSACIG00000003617	rpp40	98	36.695	ENSODEG00000007255	-	98	36.695	Octodon_degus
ENSACIG00000003617	rpp40	88	32.609	ENSODEG00000006170	-	100	32.609	Octodon_degus
ENSACIG00000003617	rpp40	98	36.494	ENSODEG00000018153	-	98	36.494	Octodon_degus
ENSACIG00000003617	rpp40	99	75.714	ENSONIG00000014016	rpp40	99	76.590	Oreochromis_niloticus
ENSACIG00000003617	rpp40	81	36.789	ENSOANG00000001200	RPP40	98	36.789	Ornithorhynchus_anatinus
ENSACIG00000003617	rpp40	98	37.326	ENSOCUG00000000354	RPP40	98	37.326	Oryctolagus_cuniculus
ENSACIG00000003617	rpp40	99	61.690	ENSORLG00000008242	-	99	62.254	Oryzias_latipes
ENSACIG00000003617	rpp40	99	61.408	ENSORLG00020013745	-	91	61.972	Oryzias_latipes_hni
ENSACIG00000003617	rpp40	99	62.254	ENSORLG00015000887	-	99	62.254	Oryzias_latipes_hsok
ENSACIG00000003617	rpp40	99	64.888	ENSOMEG00000002747	rpp40	99	64.888	Oryzias_melastigma
ENSACIG00000003617	rpp40	98	37.989	ENSOGAG00000006055	RPP40	98	37.989	Otolemur_garnettii
ENSACIG00000003617	rpp40	88	36.778	ENSOARG00000018783	RPP40	99	37.705	Ovis_aries
ENSACIG00000003617	rpp40	98	36.464	ENSPPAG00000023703	RPP40	98	36.464	Pan_paniscus
ENSACIG00000003617	rpp40	98	37.709	ENSPPRG00000005612	RPP40	98	37.709	Panthera_pardus
ENSACIG00000003617	rpp40	98	34.262	ENSPTIG00000018847	RPP40	98	34.262	Panthera_tigris_altaica
ENSACIG00000003617	rpp40	98	36.464	ENSPTRG00000017690	RPP40	98	36.464	Pan_troglodytes
ENSACIG00000003617	rpp40	98	36.872	ENSPANG00000017865	RPP40	98	36.872	Papio_anubis
ENSACIG00000003617	rpp40	99	42.297	ENSPKIG00000006311	rpp40	99	42.297	Paramormyrops_kingsleyae
ENSACIG00000003617	rpp40	58	34.513	ENSPSIG00000007854	RPP40	99	34.513	Pelodiscus_sinensis
ENSACIG00000003617	rpp40	79	33.673	ENSPEMG00000020809	Rpp40	85	33.673	Peromyscus_maniculatus_bairdii
ENSACIG00000003617	rpp40	74	38.182	ENSPMAG00000008412	rpp40	99	38.182	Petromyzon_marinus
ENSACIG00000003617	rpp40	98	35.854	ENSPCIG00000010682	RPP40	98	35.854	Phascolarctos_cinereus
ENSACIG00000003617	rpp40	99	61.318	ENSPFOG00000011460	rpp40	99	61.318	Poecilia_formosa
ENSACIG00000003617	rpp40	99	61.095	ENSPLAG00000001334	rpp40	99	61.095	Poecilia_latipinna
ENSACIG00000003617	rpp40	99	61.671	ENSPMEG00000007721	rpp40	99	61.671	Poecilia_mexicana
ENSACIG00000003617	rpp40	99	63.112	ENSPREG00000009215	rpp40	99	63.112	Poecilia_reticulata
ENSACIG00000003617	rpp40	98	36.464	ENSPPYG00000016194	RPP40	98	36.464	Pongo_abelii
ENSACIG00000003617	rpp40	54	39.444	ENSPCAG00000002700	-	97	39.444	Procavia_capensis
ENSACIG00000003617	rpp40	98	37.709	ENSPCOG00000003907	RPP40	98	37.709	Propithecus_coquereli
ENSACIG00000003617	rpp40	98	36.872	ENSPVAG00000011325	RPP40	98	36.872	Pteropus_vampyrus
ENSACIG00000003617	rpp40	82	71.127	ENSPNYG00000004432	rpp40	100	71.228	Pundamilia_nyererei
ENSACIG00000003617	rpp40	99	43.646	ENSPNAG00000019125	rpp40	99	43.646	Pygocentrus_nattereri
ENSACIG00000003617	rpp40	98	36.740	ENSRNOG00000016226	Rpp40	98	36.964	Rattus_norvegicus
ENSACIG00000003617	rpp40	98	36.188	ENSRBIG00000035800	RPP40	98	36.789	Rhinopithecus_bieti
ENSACIG00000003617	rpp40	98	36.188	ENSRROG00000039116	RPP40	98	36.188	Rhinopithecus_roxellana
ENSACIG00000003617	rpp40	98	36.188	ENSSBOG00000020297	RPP40	98	36.188	Saimiri_boliviensis_boliviensis
ENSACIG00000003617	rpp40	73	37.956	ENSSHAG00000002102	RPP40	99	37.956	Sarcophilus_harrisii
ENSACIG00000003617	rpp40	99	43.417	ENSSFOG00015001142	rpp40	80	43.417	Scleropages_formosus
ENSACIG00000003617	rpp40	99	71.510	ENSSDUG00000007202	rpp40	99	71.510	Seriola_dumerili
ENSACIG00000003617	rpp40	99	71.225	ENSSLDG00000017563	rpp40	99	71.225	Seriola_lalandi_dorsalis
ENSACIG00000003617	rpp40	99	36.512	ENSSPUG00000017487	-	99	36.512	Sphenodon_punctatus
ENSACIG00000003617	rpp40	80	34.114	ENSSPUG00000018950	-	100	34.114	Sphenodon_punctatus
ENSACIG00000003617	rpp40	99	69.653	ENSSPAG00000022716	rpp40	99	69.653	Stegastes_partitus
ENSACIG00000003617	rpp40	98	37.989	ENSSSCG00000000998	RPP40	99	37.954	Sus_scrofa
ENSACIG00000003617	rpp40	98	37.017	ENSTGUG00000002258	-	99	37.017	Taeniopygia_guttata
ENSACIG00000003617	rpp40	97	65.706	ENSTRUG00000003755	rpp40	98	65.706	Takifugu_rubripes
ENSACIG00000003617	rpp40	99	62.216	ENSTNIG00000003077	rpp40	99	62.216	Tetraodon_nigroviridis
ENSACIG00000003617	rpp40	98	32.961	ENSTTRG00000007319	RPP40	99	32.961	Tursiops_truncatus
ENSACIG00000003617	rpp40	98	37.293	ENSUAMG00000002159	RPP40	98	37.624	Ursus_americanus
ENSACIG00000003617	rpp40	98	37.293	ENSUMAG00000018639	RPP40	92	37.293	Ursus_maritimus
ENSACIG00000003617	rpp40	98	36.464	ENSVVUG00000005451	RPP40	98	36.464	Vulpes_vulpes
ENSACIG00000003617	rpp40	98	38.547	ENSXETG00000017617	rpp40	99	38.547	Xenopus_tropicalis
ENSACIG00000003617	rpp40	60	62.500	ENSXCOG00000019991	-	89	42.982	Xiphophorus_couchianus
ENSACIG00000003617	rpp40	99	46.356	ENSXMAG00000024940	rpp40	98	46.356	Xiphophorus_maculatus