EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000003672 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 12386 bases
Position: chrCCOE01001719.1:342629-355014
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000004719	zf-met	PF12874.7	5.4e-25	1	4
ENSACIP00000004719	zf-met	PF12874.7	5.4e-25	2	4
ENSACIP00000004719	zf-met	PF12874.7	5.4e-25	3	4
ENSACIP00000004719	zf-met	PF12874.7	5.4e-25	4	4
ENSACIP00000004732	zf-met	PF12874.7	8.2e-22	1	3
ENSACIP00000004732	zf-met	PF12874.7	8.2e-22	2	3
ENSACIP00000004732	zf-met	PF12874.7	8.2e-22	3	3
ENSACIP00000004704	zf-met	PF12874.7	1.2e-21	1	4
ENSACIP00000004704	zf-met	PF12874.7	1.2e-21	2	4
ENSACIP00000004704	zf-met	PF12874.7	1.2e-21	3	4
ENSACIP00000004704	zf-met	PF12874.7	1.2e-21	4	4
ENSACIP00000004732	zf-C2H2_jaz	PF12171.8	5.1e-15	1	1
ENSACIP00000004719	zf-C2H2_jaz	PF12171.8	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000004850	-	1620	-	ENSACIP00000004704	539 (aa)	-	-
ENSACIT00000004881	-	1428	-	ENSACIP00000004732	475 (aa)	-	-
ENSACIT00000004868	-	1551	-	ENSACIP00000004719	517 (aa)	-	-

Gene Model

Click here to download ENSACIG00000003672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000003672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000003672	-	88	62.151	ENSAPEG00000002169	-	98	64.892	Amphiprion_percula
ENSACIG00000003672	-	51	54.251	ENSFHEG00000022774	-	69	44.136	Fundulus_heteroclitus
ENSACIG00000003672	-	79	53.101	ENSGAFG00000021491	-	69	54.962	Gambusia_affinis
ENSACIG00000003672	-	100	47.619	ENSKMAG00000018937	-	94	45.923	Kryptolebias_marmoratus
ENSACIG00000003672	-	52	36.782	ENSLACG00000004486	-	64	36.648	Latimeria_chalumnae
ENSACIG00000003672	-	99	57.093	ENSMAMG00000018920	-	100	56.423	Mastacembelus_armatus
ENSACIG00000003672	-	99	81.143	ENSNBRG00000018883	-	99	78.132	Neolamprologus_brichardi
ENSACIG00000003672	-	74	73.867	ENSONIG00000020374	-	94	69.824	Oreochromis_niloticus
ENSACIG00000003672	-	100	45.009	ENSORLG00000026368	-	100	46.237	Oryzias_latipes
ENSACIG00000003672	-	100	44.483	ENSORLG00020000211	-	94	43.838	Oryzias_latipes_hni
ENSACIG00000003672	-	100	46.221	ENSORLG00015004724	-	82	45.773	Oryzias_latipes_hsok
ENSACIG00000003672	-	100	46.595	ENSOMEG00000002792	-	69	49.742	Oryzias_melastigma
ENSACIG00000003672	-	56	48.094	ENSPKIG00000016531	-	59	46.556	Paramormyrops_kingsleyae
ENSACIG00000003672	-	99	46.099	ENSPFOG00000010723	-	95	42.097	Poecilia_formosa
ENSACIG00000003672	-	100	44.870	ENSPLAG00000012038	-	99	43.701	Poecilia_latipinna
ENSACIG00000003672	-	99	46.690	ENSPMEG00000020927	-	100	42.553	Poecilia_mexicana
ENSACIG00000003672	-	98	46.200	ENSPREG00000020523	-	100	42.647	Poecilia_reticulata
ENSACIG00000003672	-	97	77.055	ENSPNYG00000003309	-	98	77.820	Pundamilia_nyererei
ENSACIG00000003672	-	99	62.664	ENSSLDG00000017802	-	100	61.989	Seriola_lalandi_dorsalis
ENSACIG00000003672	-	99	45.951	ENSXMAG00000002135	-	100	42.308	Xiphophorus_maculatus