EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACIG00000003707 (Gene tree)
Gene ID
-
Gene Symbol
zgc:171971
Alias
-
Full Name
zgc:171971
Gene Type
protein_coding
Species
Amphilophus_citrinellus
Status
putative
Strand
Minus strand
Length
7638 bases
Position
chrCCOE01000098.1:1328391-1336028
Accession
ZDB-GENE-070928-37
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACIP00000004728RNA_pol_Rpc4PF05132.142.7e-2911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACIT00000004877-1101-ENSACIP00000004728366 (aa)--
Gene Model
Click here to download ENSACIG00000003707's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000003707's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACIG00000003707zgc:1719719733.744ENSACIG00000017832polr3d9134.247
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACIG00000003707zgc:1719719638.686ENSG00000168495POLR3D9138.400Homo_sapiens
ENSACIG00000003707zgc:1719719134.663ENSAPOG00000012197polr3d9134.160Acanthochromis_polyacanthus
ENSACIG00000003707zgc:1719719368.586ENSAPOG00000017634zgc:1719719965.942Acanthochromis_polyacanthus
ENSACIG00000003707zgc:1719719638.425ENSAMEG00000003221POLR3D9138.667Ailuropoda_melanoleuca
ENSACIG00000003707zgc:1719719836.634ENSAOCG00000005037polr3d10035.075Amphiprion_ocellaris
ENSACIG00000003707zgc:1719719371.504ENSAOCG00000007733zgc:17197110068.447Amphiprion_ocellaris
ENSACIG00000003707zgc:1719719834.824ENSAPEG00000013751polr3d10034.307Amphiprion_percula
ENSACIG00000003707zgc:1719719370.449ENSAPEG00000016107zgc:17197110067.718Amphiprion_percula
ENSACIG00000003707zgc:1719719835.492ENSATEG00000023119polr3d9136.043Anabas_testudineus
ENSACIG00000003707zgc:1719719964.198ENSATEG00000023125zgc:17197110063.951Anabas_testudineus
ENSACIG00000003707zgc:1719718133.521ENSAPLG00000014393POLR3D9932.286Anas_platyrhynchos
ENSACIG00000003707zgc:1719718336.034ENSACAG00000010592POLR3D8735.549Anolis_carolinensis
ENSACIG00000003707zgc:1719719638.537ENSANAG00000030023POLR3D9138.400Aotus_nancymaae
ENSACIG00000003707zgc:1719719833.907ENSACLG00000010147polr3d9134.341Astatotilapia_calliptera
ENSACIG00000003707zgc:1719719978.535ENSACLG00000000074zgc:17197110078.535Astatotilapia_calliptera
ENSACIG00000003707zgc:1719718637.466ENSAMXG00000010079polr3d9035.544Astyanax_mexicanus
ENSACIG00000003707zgc:1719719349.734ENSAMXG00000019418zgc:1719718949.861Astyanax_mexicanus
ENSACIG00000003707zgc:1719719639.024ENSBTAG00000010036POLR3D9138.710Bos_taurus
ENSACIG00000003707zgc:1719719638.537ENSCJAG00000020278POLR3D8439.247Callithrix_jacchus
ENSACIG00000003707zgc:1719719639.903ENSCAFG00000009455POLR3D9138.133Canis_familiaris
ENSACIG00000003707zgc:1719719639.903ENSCAFG00020013027POLR3D9138.133Canis_lupus_dingo
ENSACIG00000003707zgc:1719719639.512ENSCHIG00000012279POLR3D9139.785Capra_hircus
ENSACIG00000003707zgc:1719719640.196ENSTSYG00000009055POLR3D9139.200Carlito_syrichta
ENSACIG00000003707zgc:1719718138.462ENSCAPG00000010394POLR3D9738.095Cavia_aperea
ENSACIG00000003707zgc:1719719639.461ENSCPOG00000003679POLR3D9040.811Cavia_porcellus
ENSACIG00000003707zgc:1719719639.173ENSCCAG00000019817POLR3D9138.400Cebus_capucinus
ENSACIG00000003707zgc:1719719639.120ENSCATG00000025950POLR3D9138.070Cercocebus_atys
ENSACIG00000003707zgc:1719719540.640ENSCLAG00000014993POLR3D9139.733Chinchilla_lanigera
ENSACIG00000003707zgc:1719719638.821ENSCSAG00000016525POLR3D9138.338Chlorocebus_sabaeus
ENSACIG00000003707zgc:1719719636.232ENSCHOG00000000228POLR3D9136.243Choloepus_hoffmanni
ENSACIG00000003707zgc:1719719737.590ENSCPBG00000001313POLR3D9136.702Chrysemys_picta_bellii
ENSACIG00000003707zgc:1719718631.657ENSCING00000008141-9131.183Ciona_intestinalis
ENSACIG00000003707zgc:1719718631.967ENSCSAVG00000007119-8831.593Ciona_savignyi
ENSACIG00000003707zgc:1719719639.756ENSCANG00000043589POLR3D9138.338Colobus_angolensis_palliatus
ENSACIG00000003707zgc:1719719638.971ENSCGRG00001010339Polr3d9138.933Cricetulus_griseus_chok1gshd
ENSACIG00000003707zgc:1719719638.971ENSCGRG00000003956Polr3d9138.933Cricetulus_griseus_crigri
ENSACIG00000003707zgc:1719719955.309ENSCSEG00000015509zgc:17197110051.843Cynoglossus_semilaevis
ENSACIG00000003707zgc:1719718935.904ENSCSEG00000008123polr3d9335.389Cynoglossus_semilaevis
ENSACIG00000003707zgc:1719719149.864ENSCVAG00000009078-9449.041Cyprinodon_variegatus
ENSACIG00000003707zgc:1719719634.856ENSCVAG00000020687polr3d9036.288Cyprinodon_variegatus
ENSACIG00000003707zgc:1719719636.973ENSDARG00000104516polr3d9336.413Danio_rerio
ENSACIG00000003707zgc:1719719749.495ENSDARG00000042054zgc:1719718951.515Danio_rerio
ENSACIG00000003707zgc:1719719638.554ENSDNOG00000013488POLR3D9137.766Dasypus_novemcinctus
ENSACIG00000003707zgc:1719719138.660ENSDORG00000011174Polr3d9137.903Dipodomys_ordii
ENSACIG00000003707zgc:1719718740.691ENSETEG00000016516POLR3D9139.516Echinops_telfairi
ENSACIG00000003707zgc:1719716831.034ENSEBUG00000014414polr3d9030.124Eptatretus_burgeri
ENSACIG00000003707zgc:1719719638.592ENSEASG00005018824POLR3D9137.701Equus_asinus_asinus
ENSACIG00000003707zgc:1719719639.563ENSECAG00000025090-9138.770Equus_caballus
ENSACIG00000003707zgc:1719719639.216ENSEEUG00000007632POLR3D9138.978Erinaceus_europaeus
ENSACIG00000003707zgc:1719718636.290ENSELUG00000016978polr3d9835.396Esox_lucius
ENSACIG00000003707zgc:1719719752.228ENSELUG00000017642zgc:1719719550.123Esox_lucius
ENSACIG00000003707zgc:1719719638.235ENSFCAG00000005346POLR3D9138.133Felis_catus
ENSACIG00000003707zgc:1719718137.500ENSFALG00000010907POLR3D9936.080Ficedula_albicollis
ENSACIG00000003707zgc:1719719639.416ENSFDAG00000010144POLR3D9039.084Fukomys_damarensis
ENSACIG00000003707zgc:1719719856.030ENSFHEG00000003803-9954.937Fundulus_heteroclitus
ENSACIG00000003707zgc:1719719635.835ENSFHEG00000000508polr3d9936.700Fundulus_heteroclitus
ENSACIG00000003707zgc:1719719746.954ENSGMOG00000015819zgc:1719719946.447Gadus_morhua
ENSACIG00000003707zgc:1719718833.952ENSGMOG00000006293polr3d9935.946Gadus_morhua
ENSACIG00000003707zgc:1719717934.320ENSGALG00000032501-5934.564Gallus_gallus
ENSACIG00000003707zgc:1719719954.156ENSGAFG00000009259zgc:17197110053.535Gambusia_affinis
ENSACIG00000003707zgc:1719719635.784ENSGAFG00000010268polr3d9035.556Gambusia_affinis
ENSACIG00000003707zgc:1719719834.532ENSGACG00000011126polr3d9137.634Gasterosteus_aculeatus
ENSACIG00000003707zgc:1719719859.145ENSGACG00000015436zgc:17197110057.933Gasterosteus_aculeatus
ENSACIG00000003707zgc:1719719737.709ENSGAGG00000023229POLR3D9835.904Gopherus_agassizii
ENSACIG00000003707zgc:1719719638.537ENSGGOG00000007302POLR3D9138.400Gorilla_gorilla
ENSACIG00000003707zgc:1719719979.082ENSHBUG00000020493zgc:17197110079.082Haplochromis_burtoni
ENSACIG00000003707zgc:1719719833.907ENSHBUG00000012288polr3d9134.341Haplochromis_burtoni
ENSACIG00000003707zgc:1719719640.786ENSHGLG00000015415POLR3D9040.054Heterocephalus_glaber_female
ENSACIG00000003707zgc:1719719640.786ENSHGLG00100014950POLR3D9040.054Heterocephalus_glaber_male
ENSACIG00000003707zgc:1719719751.378ENSHCOG00000018819-9849.250Hippocampus_comes
ENSACIG00000003707zgc:1719719637.010ENSHCOG00000002228polr3d9037.255Hippocampus_comes
ENSACIG00000003707zgc:1719719650.125ENSIPUG00000008608zgc:1719718950.696Ictalurus_punctatus
ENSACIG00000003707zgc:1719719736.627ENSIPUG00000003480polr3d9335.789Ictalurus_punctatus
ENSACIG00000003707zgc:1719719639.903ENSSTOG00000016519POLR3D9139.247Ictidomys_tridecemlineatus
ENSACIG00000003707zgc:1719719638.386ENSJJAG00000006743Polr3d9038.606Jaculus_jaculus
ENSACIG00000003707zgc:1719719835.539ENSKMAG00000005145polr3d10036.881Kryptolebias_marmoratus
ENSACIG00000003707zgc:1719719966.832ENSLBEG00000009545zgc:17197110065.099Labrus_bergylta
ENSACIG00000003707zgc:1719719832.936ENSLBEG00000003430polr3d9135.598Labrus_bergylta
ENSACIG00000003707zgc:1719719537.408ENSLACG00000016654POLR3D9236.898Latimeria_chalumnae
ENSACIG00000003707zgc:1719718937.209ENSLOCG00000016080polr3d9536.387Lepisosteus_oculatus
ENSACIG00000003707zgc:1719719149.326ENSLOCG00000006467zgc:1719719647.668Lepisosteus_oculatus
ENSACIG00000003707zgc:1719719639.048ENSLAFG00000001562POLR3D9039.402Loxodonta_africana
ENSACIG00000003707zgc:1719719639.120ENSMFAG00000029141POLR3D9138.070Macaca_fascicularis
ENSACIG00000003707zgc:1719719639.120ENSMMUG00000023226POLR3D9138.338Macaca_mulatta
ENSACIG00000003707zgc:1719719639.120ENSMNEG00000039410POLR3D9138.070Macaca_nemestrina
ENSACIG00000003707zgc:1719719639.120ENSMLEG00000031413POLR3D9138.070Mandrillus_leucophaeus
ENSACIG00000003707zgc:1719719734.826ENSMAMG00000008914polr3d9135.989Mastacembelus_armatus
ENSACIG00000003707zgc:1719719366.313ENSMAMG00000020617zgc:17197110063.772Mastacembelus_armatus
ENSACIG00000003707zgc:1719719978.535ENSMZEG00005003175zgc:17197110078.535Maylandia_zebra
ENSACIG00000003707zgc:1719719833.907ENSMZEG00005011442polr3d9134.341Maylandia_zebra
ENSACIG00000003707zgc:1719719638.480ENSMAUG00000006844Polr3d9138.624Mesocricetus_auratus
ENSACIG00000003707zgc:1719719741.487ENSMICG00000001049POLR3D9138.583Microcebus_murinus
ENSACIG00000003707zgc:1719719639.372ENSMOCG00000005195Polr3d9138.933Microtus_ochrogaster
ENSACIG00000003707zgc:1719718738.056ENSMMOG00000013845polr3d9138.375Mola_mola
ENSACIG00000003707zgc:1719718938.381ENSMODG00000009491POLR3D9237.158Monodelphis_domestica
ENSACIG00000003707zgc:1719719967.322ENSMALG00000005659zgc:17197110063.861Monopterus_albus
ENSACIG00000003707zgc:1719718736.685ENSMALG00000002928polr3d9036.461Monopterus_albus
ENSACIG00000003707zgc:1719719640.000MGP_CAROLIEiJ_G0019481Polr3d9138.770Mus_caroli
ENSACIG00000003707zgc:1719719640.000ENSMUSG00000000776Polr3d9138.770Mus_musculus
ENSACIG00000003707zgc:1719719638.293MGP_PahariEiJ_G0030498Polr3d9136.631Mus_pahari
ENSACIG00000003707zgc:1719719640.000MGP_SPRETEiJ_G0020373Polr3d9138.770Mus_spretus
ENSACIG00000003707zgc:1719719639.512ENSMPUG00000003653POLR3D9138.400Mustela_putorius_furo
ENSACIG00000003707zgc:1719719638.200ENSMLUG00000002109POLR3D9038.710Myotis_lucifugus
ENSACIG00000003707zgc:1719719639.078ENSNGAG00000013872Polr3d9138.770Nannospalax_galili
ENSACIG00000003707zgc:1719718766.387ENSNBRG00000022951zgc:1719719266.387Neolamprologus_brichardi
ENSACIG00000003707zgc:1719719834.236ENSNBRG00000019106polr3d9134.711Neolamprologus_brichardi
ENSACIG00000003707zgc:1719719638.200ENSMEUG00000000465POLR3D9237.566Notamacropus_eugenii
ENSACIG00000003707zgc:1719719640.244ENSOPRG00000013146POLR3D9139.785Ochotona_princeps
ENSACIG00000003707zgc:1719719640.670ENSODEG00000005884POLR3D9239.529Octodon_degus
ENSACIG00000003707zgc:1719719833.661ENSONIG00000010634polr3d9134.341Oreochromis_niloticus
ENSACIG00000003707zgc:1719719976.190ENSONIG00000007280zgc:17197110077.694Oreochromis_niloticus
ENSACIG00000003707zgc:1719718635.389ENSOANG00000010776POLR3D9036.043Ornithorhynchus_anatinus
ENSACIG00000003707zgc:1719719641.220ENSOCUG00000017410POLR3D9140.860Oryctolagus_cuniculus
ENSACIG00000003707zgc:1719719834.390ENSORLG00000011583polr3d10034.500Oryzias_latipes
ENSACIG00000003707zgc:1719719834.300ENSORLG00020005668polr3d10034.406Oryzias_latipes_hni
ENSACIG00000003707zgc:1719718734.048ENSORLG00015020291polr3d9033.791Oryzias_latipes_hsok
ENSACIG00000003707zgc:1719718736.631ENSOMEG00000010120polr3d9036.585Oryzias_melastigma
ENSACIG00000003707zgc:1719719539.950ENSOGAG00000004912POLR3D9139.623Otolemur_garnettii
ENSACIG00000003707zgc:1719719738.889ENSOARG00000010372-7338.462Ovis_aries
ENSACIG00000003707zgc:1719719638.686ENSPPAG00000029591POLR3D9138.400Pan_paniscus
ENSACIG00000003707zgc:1719719638.235ENSPPRG00000022827POLR3D9138.133Panthera_pardus
ENSACIG00000003707zgc:1719719638.235ENSPTIG00000018239POLR3D9138.133Panthera_tigris_altaica
ENSACIG00000003707zgc:1719719638.686ENSPTRG00000020056POLR3D9138.400Pan_troglodytes
ENSACIG00000003707zgc:1719719639.120ENSPANG00000009440POLR3D9138.070Papio_anubis
ENSACIG00000003707zgc:1719719336.364ENSPKIG00000006727polr3d9434.805Paramormyrops_kingsleyae
ENSACIG00000003707zgc:1719719849.749ENSPKIG00000025283zgc:1719718851.499Paramormyrops_kingsleyae
ENSACIG00000003707zgc:1719719637.108ENSPSIG00000006113POLR3D9235.602Pelodiscus_sinensis
ENSACIG00000003707zgc:1719719838.303ENSPMGG00000021658polr3d9337.047Periophthalmus_magnuspinnatus
ENSACIG00000003707zgc:1719719639.120ENSPEMG00000023314Polr3d9138.606Peromyscus_maniculatus_bairdii
ENSACIG00000003707zgc:1719718635.248ENSPMAG00000001455polr3d9036.364Petromyzon_marinus
ENSACIG00000003707zgc:1719719638.875ENSPCIG00000012699POLR3D9137.433Phascolarctos_cinereus
ENSACIG00000003707zgc:1719719635.468ENSPFOG00000012698polr3d9035.833Poecilia_formosa
ENSACIG00000003707zgc:1719719954.000ENSPFOG00000011089zgc:17197110054.040Poecilia_formosa
ENSACIG00000003707zgc:1719719635.222ENSPLAG00000008149polr3d9035.556Poecilia_latipinna
ENSACIG00000003707zgc:1719719850.133ENSPLAG00000003645zgc:1719719850.133Poecilia_latipinna
ENSACIG00000003707zgc:1719719953.133ENSPMEG00000016953zgc:17197110053.283Poecilia_mexicana
ENSACIG00000003707zgc:1719719634.644ENSPMEG00000002702polr3d9035.734Poecilia_mexicana
ENSACIG00000003707zgc:1719719952.273ENSPREG00000003755-10052.020Poecilia_reticulata
ENSACIG00000003707zgc:1719719034.805ENSPREG00000007593polr3d9035.912Poecilia_reticulata
ENSACIG00000003707zgc:1719719638.517ENSPPYG00000018419POLR3D9138.400Pongo_abelii
ENSACIG00000003707zgc:1719719636.124ENSPCAG00000001971POLR3D9237.931Procavia_capensis
ENSACIG00000003707zgc:1719719641.404ENSPCOG00000028134POLR3D9140.054Propithecus_coquereli
ENSACIG00000003707zgc:1719719639.512ENSPVAG00000009873POLR3D9138.133Pteropus_vampyrus
ENSACIG00000003707zgc:1719719372.533ENSPNYG00000008902zgc:1719719073.204Pundamilia_nyererei
ENSACIG00000003707zgc:1719719833.907ENSPNYG00000016306polr3d9134.341Pundamilia_nyererei
ENSACIG00000003707zgc:1719719349.616ENSPNAG00000018934zgc:1719719050.696Pygocentrus_nattereri
ENSACIG00000003707zgc:1719718637.838ENSPNAG00000022324polr3d9236.170Pygocentrus_nattereri
ENSACIG00000003707zgc:1719719638.609ENSRNOG00000010028Polr3d9138.503Rattus_norvegicus
ENSACIG00000003707zgc:1719719638.875ENSRBIG00000035406POLR3D9138.338Rhinopithecus_bieti
ENSACIG00000003707zgc:1719719638.875ENSRROG00000037278POLR3D9138.338Rhinopithecus_roxellana
ENSACIG00000003707zgc:1719719639.173ENSSBOG00000024956POLR3D9138.400Saimiri_boliviensis_boliviensis
ENSACIG00000003707zgc:1719718136.182ENSSHAG00000018257POLR3D9935.652Sarcophilus_harrisii
ENSACIG00000003707zgc:1719718149.701ENSSFOG00015011547zgc:1719719148.397Scleropages_formosus
ENSACIG00000003707zgc:1719719536.993ENSSFOG00015010611polr3d9135.079Scleropages_formosus
ENSACIG00000003707zgc:1719719736.207ENSSMAG00000006271polr3d9136.141Scophthalmus_maximus
ENSACIG00000003707zgc:1719719864.750ENSSMAG00000001465zgc:1719719961.750Scophthalmus_maximus
ENSACIG00000003707zgc:1719719968.382ENSSDUG00000016019zgc:17197110066.914Seriola_dumerili
ENSACIG00000003707zgc:1719719736.715ENSSDUG00000020718polr3d9135.989Seriola_dumerili
ENSACIG00000003707zgc:1719719736.715ENSSLDG00000009643polr3d9135.989Seriola_lalandi_dorsalis
ENSACIG00000003707zgc:1719719968.719ENSSLDG00000015968zgc:17197110066.914Seriola_lalandi_dorsalis
ENSACIG00000003707zgc:1719719637.073ENSSARG00000012844POLR3D9136.631Sorex_araneus
ENSACIG00000003707zgc:1719719738.049ENSSPUG00000000719POLR3D9237.666Sphenodon_punctatus
ENSACIG00000003707zgc:1719719835.748ENSSPAG00000023326polr3d9135.440Stegastes_partitus
ENSACIG00000003707zgc:1719719965.128ENSSPAG00000010384zgc:1719719469.298Stegastes_partitus
ENSACIG00000003707zgc:1719719639.953ENSSSCG00000009622POLR3D9038.992Sus_scrofa
ENSACIG00000003707zgc:1719719435.961ENSTRUG00000003555polr3d9136.785Takifugu_rubripes
ENSACIG00000003707zgc:1719719836.364ENSTNIG00000006282polr3d9136.813Tetraodon_nigroviridis
ENSACIG00000003707zgc:1719719639.518ENSTTRG00000012745POLR3D9038.814Tursiops_truncatus
ENSACIG00000003707zgc:1719718536.757ENSUAMG00000026868POLR3D8936.095Ursus_americanus
ENSACIG00000003707zgc:1719719539.558ENSUMAG00000005099POLR3D9138.830Ursus_maritimus
ENSACIG00000003707zgc:1719719639.903ENSVVUG00000005290POLR3D9138.133Vulpes_vulpes
ENSACIG00000003707zgc:1719719137.436ENSXETG00000010534polr3d9336.745Xenopus_tropicalis
ENSACIG00000003707zgc:1719719636.990ENSXCOG00000015872polr3d9036.416Xiphophorus_couchianus
ENSACIG00000003707zgc:1719719952.020ENSXMAG00000014555-10051.768Xiphophorus_maculatus
ENSACIG00000003707zgc:1719719635.697ENSXMAG00000001872polr3d9035.457Xiphophorus_maculatus

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