EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000003768 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: rbfox3
Full Name: -
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 71738 bases
Position: chrCCOE01000098.1:1936167-2007904
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000004822	Fox-1_C	PF12414.8	1.7e-30	1	1
ENSACIP00000004822	RRM_1	PF00076.22	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000004972	-	1071	-	ENSACIP00000004822	356 (aa)	-	-

Gene Model

Click here to download ENSACIG00000003768's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000003768's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000003768	-	87	71.704	ENSACIG00000010817	rbfox3b	94	71.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000003768	-	72	73.563	ENSG00000167281	RBFOX3	95	69.085	Homo_sapiens
ENSACIG00000003768	-	90	71.166	ENSAPOG00000021630	rbfox3b	84	70.859	Acanthochromis_polyacanthus
ENSACIG00000003768	-	90	68.750	ENSAPOG00000015658	-	79	68.750	Acanthochromis_polyacanthus
ENSACIG00000003768	-	74	74.908	ENSAMEG00000014170	RBFOX3	83	70.606	Ailuropoda_melanoleuca
ENSACIG00000003768	-	90	81.366	ENSAOCG00000010786	-	82	81.366	Amphiprion_ocellaris
ENSACIG00000003768	-	90	71.166	ENSAOCG00000012358	rbfox3b	84	70.859	Amphiprion_ocellaris
ENSACIG00000003768	-	90	80.675	ENSAPEG00000015891	-	82	81.651	Amphiprion_percula
ENSACIG00000003768	-	90	68.012	ENSAPEG00000019081	rbfox3b	72	77.068	Amphiprion_percula
ENSACIG00000003768	-	83	73.333	ENSATEG00000023101	-	92	73.651	Anabas_testudineus
ENSACIG00000003768	-	87	64.348	ENSATEG00000019945	rbfox3b	95	64.928	Anabas_testudineus
ENSACIG00000003768	-	90	68.598	ENSACAG00000016093	RBFOX3	86	68.293	Anolis_carolinensis
ENSACIG00000003768	-	71	72.481	ENSANAG00000023457	RBFOX3	95	67.823	Aotus_nancymaae
ENSACIG00000003768	-	90	71.296	ENSACLG00000020011	rbfox3b	95	70.288	Astatotilapia_calliptera
ENSACIG00000003768	-	90	84.049	ENSACLG00000025552	-	84	84.049	Astatotilapia_calliptera
ENSACIG00000003768	-	90	68.502	ENSAMXG00000042841	rbfox3b	88	67.584	Astyanax_mexicanus
ENSACIG00000003768	-	79	76.573	ENSAMXG00000037246	rbfox3a	94	73.030	Astyanax_mexicanus
ENSACIG00000003768	-	71	74.031	ENSBTAG00000006280	RBFOX3	78	71.336	Bos_taurus
ENSACIG00000003768	-	71	73.438	ENSCJAG00000009563	RBFOX3	88	68.690	Callithrix_jacchus
ENSACIG00000003768	-	59	77.990	ENSCAFG00000005547	RBFOX3	80	73.251	Canis_familiaris
ENSACIG00000003768	-	72	73.180	ENSCAFG00020008126	RBFOX3	69	72.563	Canis_lupus_dingo
ENSACIG00000003768	-	72	72.901	ENSCHIG00000009124	RBFOX3	69	72.924	Capra_hircus
ENSACIG00000003768	-	72	73.563	ENSTSYG00000029617	RBFOX3	96	61.708	Carlito_syrichta
ENSACIG00000003768	-	83	59.829	ENSCPOG00000021703	RBFOX3	71	72.563	Cavia_porcellus
ENSACIG00000003768	-	71	72.481	ENSCCAG00000028450	RBFOX3	95	67.823	Cebus_capucinus
ENSACIG00000003768	-	71	75.000	ENSCATG00000018349	RBFOX3	95	69.085	Cercocebus_atys
ENSACIG00000003768	-	83	60.458	ENSCLAG00000006449	RBFOX3	96	60.989	Chinchilla_lanigera
ENSACIG00000003768	-	71	74.031	ENSCSAG00000002355	RBFOX3	95	69.085	Chlorocebus_sabaeus
ENSACIG00000003768	-	79	73.852	ENSCPBG00000010904	RBFOX3	95	68.987	Chrysemys_picta_bellii
ENSACIG00000003768	-	72	73.282	ENSCANG00000043120	RBFOX3	95	69.085	Colobus_angolensis_palliatus
ENSACIG00000003768	-	72	73.282	ENSCGRG00001019476	Rbfox3	71	73.285	Cricetulus_griseus_chok1gshd
ENSACIG00000003768	-	72	73.282	ENSCGRG00000003268	Rbfox3	71	73.285	Cricetulus_griseus_crigri
ENSACIG00000003768	-	90	58.841	ENSCSEG00000020606	RBFOX3	89	57.862	Cynoglossus_semilaevis
ENSACIG00000003768	-	91	79.077	ENSCSEG00000015567	RBFOX3	93	74.366	Cynoglossus_semilaevis
ENSACIG00000003768	-	90	71.166	ENSCVAG00000006882	rbfox3b	84	70.859	Cyprinodon_variegatus
ENSACIG00000003768	-	87	65.705	ENSDARG00000074310	rbfox3b	97	69.903	Danio_rerio
ENSACIG00000003768	-	90	73.030	ENSDARG00000010083	rbfox3a	95	73.333	Danio_rerio
ENSACIG00000003768	-	53	79.679	ENSDNOG00000039391	RBFOX3	65	64.015	Dasypus_novemcinctus
ENSACIG00000003768	-	83	52.161	ENSDORG00000005352	Rbfox3	69	61.957	Dipodomys_ordii
ENSACIG00000003768	-	79	53.061	ENSEBUG00000013559	RBFOX3	73	53.191	Eptatretus_burgeri
ENSACIG00000003768	-	79	65.845	ENSEBUG00000002129	RBFOX3	90	60.947	Eptatretus_burgeri
ENSACIG00000003768	-	71	73.643	ENSEASG00005005059	RBFOX3	95	69.497	Equus_asinus_asinus
ENSACIG00000003768	-	71	73.256	ENSECAG00000023811	RBFOX3	95	69.497	Equus_caballus
ENSACIG00000003768	-	54	76.410	ENSEEUG00000013974	RBFOX3	56	76.190	Erinaceus_europaeus
ENSACIG00000003768	-	53	64.021	ENSELUG00000009807	-	50	64.021	Esox_lucius
ENSACIG00000003768	-	87	74.434	ENSELUG00000017963	rbfox3b	91	73.786	Esox_lucius
ENSACIG00000003768	-	79	72.887	ENSFCAG00000002555	RBFOX3	95	67.823	Felis_catus
ENSACIG00000003768	-	64	73.913	ENSFALG00000012288	RBFOX3	84	58.601	Ficedula_albicollis
ENSACIG00000003768	-	83	54.701	ENSFDAG00000007489	RBFOX3	70	66.065	Fukomys_damarensis
ENSACIG00000003768	-	87	61.587	ENSFHEG00000008550	rbfox3b	95	61.270	Fundulus_heteroclitus
ENSACIG00000003768	-	87	53.463	ENSGMOG00000019304	-	63	66.165	Gadus_morhua
ENSACIG00000003768	-	79	75.265	ENSGALG00000032889	RBFOX3	86	70.031	Gallus_gallus
ENSACIG00000003768	-	90	68.944	ENSGAFG00000005025	rbfox3b	83	68.012	Gambusia_affinis
ENSACIG00000003768	-	83	65.143	ENSGACG00000002138	-	92	66.301	Gasterosteus_aculeatus
ENSACIG00000003768	-	79	73.852	ENSGAGG00000020025	RBFOX3	95	68.987	Gopherus_agassizii
ENSACIG00000003768	-	71	75.000	ENSGGOG00000012546	RBFOX3	95	69.085	Gorilla_gorilla
ENSACIG00000003768	-	90	83.742	ENSHBUG00000023098	-	89	83.742	Haplochromis_burtoni
ENSACIG00000003768	-	90	71.296	ENSHBUG00000018099	rbfox3b	84	70.370	Haplochromis_burtoni
ENSACIG00000003768	-	83	59.773	ENSHGLG00000008679	RBFOX3	71	72.924	Heterocephalus_glaber_female
ENSACIG00000003768	-	71	71.373	ENSHGLG00100014739	RBFOX3	87	69.338	Heterocephalus_glaber_male
ENSACIG00000003768	-	87	72.816	ENSHCOG00000001863	RBFOX3	94	68.882	Hippocampus_comes
ENSACIG00000003768	-	72	71.318	ENSHCOG00000007444	RBFOX3	67	68.953	Hippocampus_comes
ENSACIG00000003768	-	79	74.825	ENSIPUG00000012010	rbfox3a	94	71.515	Ictalurus_punctatus
ENSACIG00000003768	-	78	72.202	ENSIPUG00000021966	rbfox3b	98	73.022	Ictalurus_punctatus
ENSACIG00000003768	-	72	73.282	ENSJJAG00000014167	Rbfox3	72	73.285	Jaculus_jaculus
ENSACIG00000003768	-	90	72.360	ENSKMAG00000006726	rbfox3b	84	70.859	Kryptolebias_marmoratus
ENSACIG00000003768	-	92	80.299	ENSLBEG00000022508	-	95	80.299	Labrus_bergylta
ENSACIG00000003768	-	90	70.859	ENSLBEG00000004030	rbfox3b	94	71.383	Labrus_bergylta
ENSACIG00000003768	-	79	73.220	ENSLACG00000018409	-	86	69.412	Latimeria_chalumnae
ENSACIG00000003768	-	51	58.378	ENSLACG00000000021	-	95	57.838	Latimeria_chalumnae
ENSACIG00000003768	-	79	79.505	ENSLOCG00000012267	rbfox3a	94	75.229	Lepisosteus_oculatus
ENSACIG00000003768	-	92	67.052	ENSLAFG00000016623	RBFOX3	87	67.052	Loxodonta_africana
ENSACIG00000003768	-	72	73.563	ENSMFAG00000002247	RBFOX3	72	73.551	Macaca_fascicularis
ENSACIG00000003768	-	72	73.563	ENSMMUG00000023028	RBFOX3	95	69.085	Macaca_mulatta
ENSACIG00000003768	-	72	73.563	ENSMNEG00000041147	RBFOX3	95	69.085	Macaca_nemestrina
ENSACIG00000003768	-	72	73.563	ENSMLEG00000025686	RBFOX3	95	69.085	Mandrillus_leucophaeus
ENSACIG00000003768	-	90	82.500	ENSMAMG00000020600	-	88	82.500	Mastacembelus_armatus
ENSACIG00000003768	-	87	69.256	ENSMAMG00000019810	rbfox3b	94	68.285	Mastacembelus_armatus
ENSACIG00000003768	-	90	71.296	ENSMZEG00005000781	rbfox3b	84	70.370	Maylandia_zebra
ENSACIG00000003768	-	97	75.410	ENSMZEG00005003055	-	90	75.410	Maylandia_zebra
ENSACIG00000003768	-	62	76.444	ENSMGAG00000005600	RBFOX3	85	77.333	Meleagris_gallopavo
ENSACIG00000003768	-	83	59.312	ENSMAUG00000013543	Rbfox3	96	59.890	Mesocricetus_auratus
ENSACIG00000003768	-	78	72.438	ENSMICG00000014898	RBFOX3	95	68.139	Microcebus_murinus
ENSACIG00000003768	-	72	73.664	ENSMOCG00000015373	Rbfox3	96	61.538	Microtus_ochrogaster
ENSACIG00000003768	-	90	70.031	ENSMMOG00000020193	rbfox3b	78	72.848	Mola_mola
ENSACIG00000003768	-	79	73.145	ENSMODG00000002089	RBFOX3	86	68.502	Monodelphis_domestica
ENSACIG00000003768	-	90	78.528	ENSMALG00000018270	-	91	78.205	Monopterus_albus
ENSACIG00000003768	-	90	70.552	ENSMALG00000020407	rbfox3b	84	69.939	Monopterus_albus
ENSACIG00000003768	-	72	72.901	MGP_CAROLIEiJ_G0017487	Rbfox3	97	78.344	Mus_caroli
ENSACIG00000003768	-	83	69.205	ENSMUSG00000025576	Rbfox3	97	78.344	Mus_musculus
ENSACIG00000003768	-	72	73.282	MGP_PahariEiJ_G0018614	Rbfox3	97	78.981	Mus_pahari
ENSACIG00000003768	-	72	72.901	MGP_SPRETEiJ_G0018331	Rbfox3	97	78.344	Mus_spretus
ENSACIG00000003768	-	79	70.820	ENSMPUG00000012319	RBFOX3	90	67.335	Mustela_putorius_furo
ENSACIG00000003768	-	72	73.282	ENSNGAG00000018006	Rbfox3	96	61.538	Nannospalax_galili
ENSACIG00000003768	-	90	71.207	ENSNBRG00000010102	rbfox3b	78	73.490	Neolamprologus_brichardi
ENSACIG00000003768	-	78	88.087	ENSNBRG00000022885	-	76	88.087	Neolamprologus_brichardi
ENSACIG00000003768	-	54	70.792	ENSNLEG00000000153	-	72	70.792	Nomascus_leucogenys
ENSACIG00000003768	-	72	51.550	ENSMEUG00000004218	-	72	53.114	Notamacropus_eugenii
ENSACIG00000003768	-	53	73.958	ENSOPRG00000016279	-	54	73.958	Ochotona_princeps
ENSACIG00000003768	-	83	69.536	ENSODEG00000009433	RBFOX3	95	69.716	Octodon_degus
ENSACIG00000003768	-	90	70.859	ENSONIG00000009549	rbfox3b	84	70.552	Oreochromis_niloticus
ENSACIG00000003768	-	90	83.742	ENSONIG00000007282	-	92	81.899	Oreochromis_niloticus
ENSACIG00000003768	-	90	71.166	ENSORLG00000000905	rbfox3b	67	69.325	Oryzias_latipes
ENSACIG00000003768	-	90	70.859	ENSORLG00020018030	rbfox3b	93	60.429	Oryzias_latipes_hni
ENSACIG00000003768	-	90	70.552	ENSORLG00015009200	rbfox3b	94	60.317	Oryzias_latipes_hsok
ENSACIG00000003768	-	74	71.831	ENSOMEG00000014677	rbfox3b	74	72.054	Oryzias_melastigma
ENSACIG00000003768	-	78	72.085	ENSOGAG00000029595	RBFOX3	82	67.584	Otolemur_garnettii
ENSACIG00000003768	-	61	63.677	ENSOARG00000002908	RBFOX3	86	54.252	Ovis_aries
ENSACIG00000003768	-	72	73.563	ENSPPAG00000025383	RBFOX3	100	71.242	Pan_paniscus
ENSACIG00000003768	-	72	73.180	ENSPPRG00000007819	RBFOX3	73	73.188	Panthera_pardus
ENSACIG00000003768	-	72	73.282	ENSPTRG00000009727	RBFOX3	95	69.085	Pan_troglodytes
ENSACIG00000003768	-	72	73.563	ENSPANG00000019837	RBFOX3	95	69.085	Papio_anubis
ENSACIG00000003768	-	90	60.123	ENSPKIG00000022633	-	85	59.202	Paramormyrops_kingsleyae
ENSACIG00000003768	-	90	75.701	ENSPKIG00000010299	rbfox3a	86	76.508	Paramormyrops_kingsleyae
ENSACIG00000003768	-	79	74.021	ENSPMGG00000008000	rbfox3b	82	75.812	Periophthalmus_magnuspinnatus
ENSACIG00000003768	-	75	71.956	ENSPEMG00000010500	Rbfox3	74	72.281	Peromyscus_maniculatus_bairdii
ENSACIG00000003768	-	82	71.525	ENSPCIG00000005766	RBFOX3	95	59.177	Phascolarctos_cinereus
ENSACIG00000003768	-	90	71.166	ENSPFOG00000018294	rbfox3b	81	70.859	Poecilia_formosa
ENSACIG00000003768	-	67	76.793	ENSPLAG00000000481	rbfox3b	69	74.895	Poecilia_latipinna
ENSACIG00000003768	-	87	61.905	ENSPMEG00000022997	rbfox3b	95	61.587	Poecilia_mexicana
ENSACIG00000003768	-	90	70.642	ENSPREG00000012886	rbfox3b	89	69.909	Poecilia_reticulata
ENSACIG00000003768	-	78	67.138	ENSPPYG00000008704	RBFOX3	84	65.563	Pongo_abelii
ENSACIG00000003768	-	72	72.797	ENSPCAG00000001401	RBFOX3	96	61.326	Procavia_capensis
ENSACIG00000003768	-	77	72.464	ENSPCOG00000012689	RBFOX3	72	72.464	Propithecus_coquereli
ENSACIG00000003768	-	72	63.602	ENSPVAG00000015243	RBFOX3	72	64.130	Pteropus_vampyrus
ENSACIG00000003768	-	78	89.568	ENSPNYG00000009079	-	80	82.555	Pundamilia_nyererei
ENSACIG00000003768	-	74	76.604	ENSPNYG00000010414	rbfox3b	73	76.604	Pundamilia_nyererei
ENSACIG00000003768	-	87	57.605	ENSPNAG00000018173	rbfox3b	85	57.605	Pygocentrus_nattereri
ENSACIG00000003768	-	79	76.923	ENSPNAG00000002889	rbfox3a	84	73.636	Pygocentrus_nattereri
ENSACIG00000003768	-	72	73.282	ENSRNOG00000003386	Rbfox3	95	69.811	Rattus_norvegicus
ENSACIG00000003768	-	78	73.498	ENSRBIG00000040449	RBFOX3	86	68.807	Rhinopithecus_bieti
ENSACIG00000003768	-	72	73.563	ENSRROG00000000766	RBFOX3	95	69.085	Rhinopithecus_roxellana
ENSACIG00000003768	-	71	73.438	ENSSBOG00000031591	RBFOX3	95	67.823	Saimiri_boliviensis_boliviensis
ENSACIG00000003768	-	90	66.764	ENSSHAG00000016076	RBFOX3	95	59.177	Sarcophilus_harrisii
ENSACIG00000003768	-	90	74.618	ENSSFOG00015023260	rbfox3a	88	71.470	Scleropages_formosus
ENSACIG00000003768	-	79	66.783	ENSSFOG00015004716	RBFOX3	88	63.190	Scleropages_formosus
ENSACIG00000003768	-	90	76.000	ENSSMAG00000019052	-	95	75.796	Scophthalmus_maximus
ENSACIG00000003768	-	90	67.055	ENSSMAG00000012618	rbfox3b	74	66.764	Scophthalmus_maximus
ENSACIG00000003768	-	87	61.587	ENSSDUG00000023183	rbfox3b	95	61.270	Seriola_dumerili
ENSACIG00000003768	-	90	77.019	ENSSDUG00000015801	-	82	77.019	Seriola_dumerili
ENSACIG00000003768	-	90	70.859	ENSSLDG00000000149	rbfox3b	84	70.552	Seriola_lalandi_dorsalis
ENSACIG00000003768	-	92	80.488	ENSSLDG00000016098	-	88	80.967	Seriola_lalandi_dorsalis
ENSACIG00000003768	-	71	74.031	ENSSPUG00000011733	RBFOX3	95	69.085	Sphenodon_punctatus
ENSACIG00000003768	-	83	74.667	ENSSPAG00000004898	-	95	71.131	Stegastes_partitus
ENSACIG00000003768	-	90	67.391	ENSSPAG00000017571	rbfox3b	82	67.081	Stegastes_partitus
ENSACIG00000003768	-	65	75.107	ENSSSCG00000039498	RBFOX3	91	61.250	Sus_scrofa
ENSACIG00000003768	-	87	70.159	ENSTRUG00000004894	rbfox3b	76	73.868	Takifugu_rubripes
ENSACIG00000003768	-	90	67.536	ENSTNIG00000011278	rbfox3b	85	67.246	Tetraodon_nigroviridis
ENSACIG00000003768	-	57	53.571	ENSTBEG00000004296	-	53	68.571	Tupaia_belangeri
ENSACIG00000003768	-	72	65.769	ENSTTRG00000003676	RBFOX3	72	66.182	Tursiops_truncatus
ENSACIG00000003768	-	71	73.643	ENSUAMG00000004668	RBFOX3	95	69.085	Ursus_americanus
ENSACIG00000003768	-	80	72.569	ENSVVUG00000017864	RBFOX3	95	68.454	Vulpes_vulpes
ENSACIG00000003768	-	85	60.577	ENSXETG00000020236	rbfox3	85	58.824	Xenopus_tropicalis
ENSACIG00000003768	-	90	70.859	ENSXCOG00000018262	rbfox3b	95	71.383	Xiphophorus_couchianus
ENSACIG00000003768	-	90	70.859	ENSXMAG00000012939	rbfox3b	84	70.552	Xiphophorus_maculatus