EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACIG00000004097 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Plus strand
Length: 65997 bases
Position: chrCCOE01000139.1:1276646-1342642
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005316	BRK	PF07533.16	8.3e-32	1	2
ENSACIP00000005316	BRK	PF07533.16	8.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000005481	-	8637	-	ENSACIP00000005316	2878 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACIG00000004097	chd9	59	58.281	ENSACIG00000006440	chd8	71	58.339
ENSACIG00000004097	chd9	66	67.766	ENSACIG00000001590	chd7	85	68.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004097	chd9	73	61.327	ENSG00000177200	CHD9	98	68.852	Homo_sapiens
ENSACIG00000004097	chd9	98	84.420	ENSAPOG00000023034	chd9	97	87.505	Acanthochromis_polyacanthus
ENSACIG00000004097	chd9	73	61.963	ENSAMEG00000016232	CHD9	55	73.995	Ailuropoda_melanoleuca
ENSACIG00000004097	chd9	98	85.475	ENSAOCG00000005487	chd9	98	87.587	Amphiprion_ocellaris
ENSACIG00000004097	chd9	98	85.582	ENSAPEG00000009859	chd9	97	87.711	Amphiprion_percula
ENSACIG00000004097	chd9	98	82.685	ENSATEG00000002748	chd9	99	82.982	Anabas_testudineus
ENSACIG00000004097	chd9	98	60.853	ENSAPLG00000002826	CHD9	79	70.206	Anas_platyrhynchos
ENSACIG00000004097	chd9	73	62.636	ENSACAG00000016150	CHD9	55	74.756	Anolis_carolinensis
ENSACIG00000004097	chd9	73	61.274	ENSANAG00000015630	CHD9	92	70.922	Aotus_nancymaae
ENSACIG00000004097	chd9	98	88.889	ENSACLG00000016899	chd9	99	88.881	Astatotilapia_calliptera
ENSACIG00000004097	chd9	93	67.536	ENSAMXG00000005652	chd9	98	74.085	Astyanax_mexicanus
ENSACIG00000004097	chd9	73	61.455	ENSBTAG00000002287	CHD9	56	73.467	Bos_taurus
ENSACIG00000004097	chd9	73	61.714	ENSCAFG00000009699	CHD9	55	73.873	Canis_familiaris
ENSACIG00000004097	chd9	73	61.714	ENSCAFG00020002879	CHD9	92	70.486	Canis_lupus_dingo
ENSACIG00000004097	chd9	97	59.742	ENSCHIG00000021000	CHD9	56	73.049	Capra_hircus
ENSACIG00000004097	chd9	73	61.229	ENSTSYG00000007693	CHD9	92	70.486	Carlito_syrichta
ENSACIG00000004097	chd9	79	61.565	ENSCAPG00000011604	CHD9	77	62.081	Cavia_aperea
ENSACIG00000004097	chd9	73	58.403	ENSCPOG00000036544	CHD9	79	67.070	Cavia_porcellus
ENSACIG00000004097	chd9	73	61.400	ENSCCAG00000036178	CHD9	92	71.886	Cebus_capucinus
ENSACIG00000004097	chd9	73	61.372	ENSCATG00000036753	CHD9	91	71.631	Cercocebus_atys
ENSACIG00000004097	chd9	73	61.327	ENSCSAG00000005311	CHD9	79	69.434	Chlorocebus_sabaeus
ENSACIG00000004097	chd9	68	82.692	ENSCHOG00000003935	CHD9	53	83.784	Choloepus_hoffmanni
ENSACIG00000004097	chd9	89	80.769	ENSCPBG00000012459	CHD9	84	78.622	Chrysemys_picta_bellii
ENSACIG00000004097	chd9	73	61.327	ENSCANG00000030349	CHD9	91	71.631	Colobus_angolensis_palliatus
ENSACIG00000004097	chd9	73	61.549	ENSCGRG00001016150	Chd9	79	68.948	Cricetulus_griseus_chok1gshd
ENSACIG00000004097	chd9	73	61.549	ENSCGRG00000012850	Chd9	94	75.362	Cricetulus_griseus_crigri
ENSACIG00000004097	chd9	99	78.107	ENSCSEG00000009209	chd9	97	80.066	Cynoglossus_semilaevis
ENSACIG00000004097	chd9	95	78.525	ENSCVAG00000016195	chd9	99	78.764	Cyprinodon_variegatus
ENSACIG00000004097	chd9	55	78.777	ENSDARG00000074498	chd9	94	75.021	Danio_rerio
ENSACIG00000004097	chd9	54	73.883	ENSDNOG00000006045	CHD9	65	75.000	Dasypus_novemcinctus
ENSACIG00000004097	chd9	64	92.063	ENSETEG00000009565	CHD9	64	92.063	Echinops_telfairi
ENSACIG00000004097	chd9	85	76.384	ENSEASG00005014832	CHD9	92	78.664	Equus_asinus_asinus
ENSACIG00000004097	chd9	73	61.680	ENSECAG00000011505	CHD9	79	69.741	Equus_caballus
ENSACIG00000004097	chd9	59	87.225	ENSEEUG00000014515	CHD9	67	84.530	Erinaceus_europaeus
ENSACIG00000004097	chd9	87	76.456	ENSELUG00000006031	chd9	97	74.740	Esox_lucius
ENSACIG00000004097	chd9	73	61.594	ENSFCAG00000022534	CHD9	92	70.833	Felis_catus
ENSACIG00000004097	chd9	56	73.807	ENSFALG00000013276	CHD9	67	75.107	Ficedula_albicollis
ENSACIG00000004097	chd9	73	60.817	ENSFDAG00000021037	CHD9	79	69.510	Fukomys_damarensis
ENSACIG00000004097	chd9	97	80.847	ENSFHEG00000006068	chd9	98	83.065	Fundulus_heteroclitus
ENSACIG00000004097	chd9	66	83.084	ENSGMOG00000006040	chd9	81	85.897	Gadus_morhua
ENSACIG00000004097	chd9	73	62.970	ENSGALG00000039178	CHD9	57	74.924	Gallus_gallus
ENSACIG00000004097	chd9	98	77.907	ENSGAFG00000010014	chd9	97	83.846	Gambusia_affinis
ENSACIG00000004097	chd9	73	61.462	ENSGGOG00000014816	CHD9	92	71.277	Gorilla_gorilla
ENSACIG00000004097	chd9	98	89.199	ENSHBUG00000023322	chd9	97	92.657	Haplochromis_burtoni
ENSACIG00000004097	chd9	73	60.982	ENSHGLG00000014938	CHD9	96	74.197	Heterocephalus_glaber_female
ENSACIG00000004097	chd9	95	75.398	ENSHCOG00000000937	chd9	96	79.798	Hippocampus_comes
ENSACIG00000004097	chd9	82	75.072	ENSIPUG00000016448	chd9	97	81.429	Ictalurus_punctatus
ENSACIG00000004097	chd9	73	61.602	ENSSTOG00000022273	CHD9	94	75.574	Ictidomys_tridecemlineatus
ENSACIG00000004097	chd9	95	80.336	ENSKMAG00000016784	chd9	94	85.690	Kryptolebias_marmoratus
ENSACIG00000004097	chd9	92	82.311	ENSLBEG00000012077	chd9	97	85.106	Labrus_bergylta
ENSACIG00000004097	chd9	72	59.729	ENSLACG00000005557	CHD9	79	66.850	Latimeria_chalumnae
ENSACIG00000004097	chd9	90	70.442	ENSLOCG00000007225	chd9	95	74.375	Lepisosteus_oculatus
ENSACIG00000004097	chd9	73	60.944	ENSLAFG00000015374	CHD9	55	73.063	Loxodonta_africana
ENSACIG00000004097	chd9	73	61.327	ENSMFAG00000041354	CHD9	91	71.631	Macaca_fascicularis
ENSACIG00000004097	chd9	73	61.327	ENSMMUG00000016310	CHD9	91	71.631	Macaca_mulatta
ENSACIG00000004097	chd9	73	61.327	ENSMNEG00000031494	CHD9	62	73.902	Macaca_nemestrina
ENSACIG00000004097	chd9	73	61.372	ENSMLEG00000043219	CHD9	91	71.631	Mandrillus_leucophaeus
ENSACIG00000004097	chd9	98	81.356	ENSMAMG00000003909	chd9	99	80.711	Mastacembelus_armatus
ENSACIG00000004097	chd9	98	87.053	ENSMZEG00005006581	chd9	97	90.511	Maylandia_zebra
ENSACIG00000004097	chd9	88	60.901	ENSMGAG00000004642	CHD9	59	70.006	Meleagris_gallopavo
ENSACIG00000004097	chd9	73	61.907	ENSMICG00000016679	CHD9	92	70.833	Microcebus_murinus
ENSACIG00000004097	chd9	98	80.896	ENSMMOG00000016406	chd9	99	80.646	Mola_mola
ENSACIG00000004097	chd9	72	64.998	ENSMODG00000013142	-	96	75.805	Monodelphis_domestica
ENSACIG00000004097	chd9	98	82.551	ENSMALG00000013306	chd9	99	82.043	Monopterus_albus
ENSACIG00000004097	chd9	73	61.710	MGP_CAROLIEiJ_G0031364	Chd9	79	69.015	Mus_caroli
ENSACIG00000004097	chd9	73	61.636	ENSMUSG00000056608	Chd9	94	74.668	Mus_musculus
ENSACIG00000004097	chd9	73	61.419	MGP_SPRETEiJ_G0032483	Chd9	79	68.643	Mus_spretus
ENSACIG00000004097	chd9	73	62.009	ENSMPUG00000003285	CHD9	56	73.995	Mustela_putorius_furo
ENSACIG00000004097	chd9	73	61.311	ENSMLUG00000004456	CHD9	79	68.790	Myotis_lucifugus
ENSACIG00000004097	chd9	98	88.812	ENSNBRG00000009423	chd9	99	88.632	Neolamprologus_brichardi
ENSACIG00000004097	chd9	73	61.101	ENSNLEG00000001026	CHD9	80	70.671	Nomascus_leucogenys
ENSACIG00000004097	chd9	63	95.294	ENSMEUG00000008222	-	70	95.294	Notamacropus_eugenii
ENSACIG00000004097	chd9	73	61.328	ENSODEG00000004466	CHD9	80	69.172	Octodon_degus
ENSACIG00000004097	chd9	81	90.377	ENSONIG00000002816	chd9	98	90.166	Oreochromis_niloticus
ENSACIG00000004097	chd9	59	70.932	ENSOANG00000013401	CHD9	55	74.924	Ornithorhynchus_anatinus
ENSACIG00000004097	chd9	56	72.442	ENSOCUG00000001016	CHD9	94	69.881	Oryctolagus_cuniculus
ENSACIG00000004097	chd9	95	77.566	ENSORLG00000013810	chd9	94	83.732	Oryzias_latipes
ENSACIG00000004097	chd9	96	78.579	ENSORLG00020020665	chd9	98	78.439	Oryzias_latipes_hni
ENSACIG00000004097	chd9	96	77.612	ENSORLG00015019126	chd9	94	83.956	Oryzias_latipes_hsok
ENSACIG00000004097	chd9	63	79.957	ENSOMEG00000015978	chd9	99	79.677	Oryzias_melastigma
ENSACIG00000004097	chd9	73	61.696	ENSOGAG00000002110	CHD9	79	69.352	Otolemur_garnettii
ENSACIG00000004097	chd9	73	61.416	ENSOARG00000017664	CHD9	55	73.152	Ovis_aries
ENSACIG00000004097	chd9	56	72.242	ENSPPAG00000039388	-	95	68.995	Pan_paniscus
ENSACIG00000004097	chd9	73	61.684	ENSPPRG00000004801	CHD9	92	70.486	Panthera_pardus
ENSACIG00000004097	chd9	73	60.423	ENSPTIG00000021854	CHD9	91	62.587	Panthera_tigris_altaica
ENSACIG00000004097	chd9	73	61.282	ENSPTRG00000008113	CHD9	92	71.277	Pan_troglodytes
ENSACIG00000004097	chd9	73	61.327	ENSPANG00000019307	CHD9	95	69.676	Papio_anubis
ENSACIG00000004097	chd9	95	66.341	ENSPKIG00000021876	chd9	94	75.373	Paramormyrops_kingsleyae
ENSACIG00000004097	chd9	97	62.500	ENSPKIG00000025401	-	88	65.216	Paramormyrops_kingsleyae
ENSACIG00000004097	chd9	63	62.275	ENSPSIG00000008099	CHD9	79	77.769	Pelodiscus_sinensis
ENSACIG00000004097	chd9	87	61.945	ENSPCIG00000017215	CHD9	97	71.463	Phascolarctos_cinereus
ENSACIG00000004097	chd9	72	79.248	ENSPFOG00000015839	chd9	99	77.414	Poecilia_formosa
ENSACIG00000004097	chd9	98	78.552	ENSPLAG00000011118	chd9	97	85.378	Poecilia_latipinna
ENSACIG00000004097	chd9	72	78.871	ENSPMEG00000015106	chd9	99	80.069	Poecilia_mexicana
ENSACIG00000004097	chd9	96	81.367	ENSPREG00000006473	chd9	97	83.921	Poecilia_reticulata
ENSACIG00000004097	chd9	73	61.282	ENSPPYG00000007348	CHD9	80	69.414	Pongo_abelii
ENSACIG00000004097	chd9	71	75.410	ENSPCAG00000007564	CHD9	68	77.068	Procavia_capensis
ENSACIG00000004097	chd9	73	59.818	ENSPCOG00000028433	CHD9	92	69.792	Propithecus_coquereli
ENSACIG00000004097	chd9	82	57.771	ENSPVAG00000015617	CHD9	78	71.860	Pteropus_vampyrus
ENSACIG00000004097	chd9	98	88.671	ENSPNYG00000010947	chd9	99	88.663	Pundamilia_nyererei
ENSACIG00000004097	chd9	98	69.564	ENSPNAG00000024141	chd9	98	74.919	Pygocentrus_nattereri
ENSACIG00000004097	chd9	73	59.029	ENSRNOG00000049302	Chd9	93	58.977	Rattus_norvegicus
ENSACIG00000004097	chd9	56	72.667	ENSRBIG00000035553	CHD9	95	69.634	Rhinopithecus_bieti
ENSACIG00000004097	chd9	55	73.826	ENSRROG00000033278	CHD9	91	71.631	Rhinopithecus_roxellana
ENSACIG00000004097	chd9	73	61.535	ENSSBOG00000030240	CHD9	92	71.277	Saimiri_boliviensis_boliviensis
ENSACIG00000004097	chd9	73	62.460	ENSSHAG00000002719	CHD9	80	69.766	Sarcophilus_harrisii
ENSACIG00000004097	chd9	96	67.359	ENSSFOG00015020209	chd9	98	73.810	Scleropages_formosus
ENSACIG00000004097	chd9	98	64.625	ENSSFOG00015001327	chd9	95	72.281	Scleropages_formosus
ENSACIG00000004097	chd9	94	83.745	ENSSMAG00000008953	chd9	97	85.808	Scophthalmus_maximus
ENSACIG00000004097	chd9	98	81.644	ENSSDUG00000006139	chd9	97	87.081	Seriola_dumerili
ENSACIG00000004097	chd9	98	84.053	ENSSLDG00000017818	chd9	97	87.608	Seriola_lalandi_dorsalis
ENSACIG00000004097	chd9	70	75.000	ENSSARG00000010632	CHD9	53	74.748	Sorex_araneus
ENSACIG00000004097	chd9	98	85.872	ENSSPAG00000021649	chd9	97	88.085	Stegastes_partitus
ENSACIG00000004097	chd9	98	59.353	ENSSSCG00000033591	CHD9	57	73.224	Sus_scrofa
ENSACIG00000004097	chd9	73	62.511	ENSTGUG00000007476	CHD9	67	74.725	Taeniopygia_guttata
ENSACIG00000004097	chd9	98	78.832	ENSTRUG00000009125	chd9	99	78.832	Takifugu_rubripes
ENSACIG00000004097	chd9	55	87.081	ENSTNIG00000003825	chd9	83	87.081	Tetraodon_nigroviridis
ENSACIG00000004097	chd9	51	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSACIG00000004097	chd9	85	61.251	ENSTTRG00000012674	CHD9	72	69.390	Tursiops_truncatus
ENSACIG00000004097	chd9	65	81.439	ENSUMAG00000004043	CHD9	95	82.291	Ursus_maritimus
ENSACIG00000004097	chd9	70	73.308	ENSVPAG00000001374	CHD9	52	73.176	Vicugna_pacos
ENSACIG00000004097	chd9	73	61.668	ENSVVUG00000019435	CHD9	55	73.812	Vulpes_vulpes
ENSACIG00000004097	chd9	98	58.174	ENSXETG00000000349	chd9	78	73.378	Xenopus_tropicalis
ENSACIG00000004097	chd9	81	85.762	ENSXCOG00000012997	chd9	97	85.720	Xiphophorus_couchianus
ENSACIG00000004097	chd9	98	79.246	ENSXMAG00000016192	chd9	99	84.726	Xiphophorus_maculatus