EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACIG00000004124 (Gene tree)
Gene ID: -
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Amphilophus_citrinellus
Status: putative
Strand: Minus strand
Length: 12602 bases
Position: chrCCOE01001545.1:1967142-1979743
Accession: ZDB-GENE-040426-769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACIP00000005485	U3_assoc_6	PF08640.11	2e-24	1	1
ENSACIP00000005468	U3_assoc_6	PF08640.11	2.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACIT00000005636	-	1743	-	ENSACIP00000005468	580 (aa)	-	-
ENSACIT00000005653	-	1698	-	ENSACIP00000005485	565 (aa)	-	-

Gene Model

Click here to download ENSACIG00000004124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACIG00000004124's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACIG00000004124	utp6	100	54.439	ENSG00000108651	UTP6	100	54.439	Homo_sapiens
ENSACIG00000004124	utp6	100	87.395	ENSAPOG00000000435	utp6	100	87.395	Acanthochromis_polyacanthus
ENSACIG00000004124	utp6	99	53.020	ENSAMEG00000005443	UTP6	99	53.020	Ailuropoda_melanoleuca
ENSACIG00000004124	utp6	100	86.555	ENSAOCG00000016812	utp6	100	86.555	Amphiprion_ocellaris
ENSACIG00000004124	utp6	100	86.555	ENSAPEG00000023565	utp6	100	86.555	Amphiprion_percula
ENSACIG00000004124	utp6	100	86.218	ENSATEG00000003401	utp6	100	86.218	Anabas_testudineus
ENSACIG00000004124	utp6	99	55.068	ENSAPLG00000005821	UTP6	99	55.068	Anas_platyrhynchos
ENSACIG00000004124	utp6	100	56.616	ENSACAG00000009472	UTP6	100	56.616	Anolis_carolinensis
ENSACIG00000004124	utp6	100	54.104	ENSANAG00000034603	UTP6	100	54.104	Aotus_nancymaae
ENSACIG00000004124	utp6	100	91.765	ENSACLG00000006728	utp6	100	91.765	Astatotilapia_calliptera
ENSACIG00000004124	utp6	100	69.748	ENSAMXG00000009478	utp6	100	69.748	Astyanax_mexicanus
ENSACIG00000004124	utp6	100	50.502	ENSBTAG00000015612	UTP6	100	50.502	Bos_taurus
ENSACIG00000004124	utp6	100	48.997	ENSBTAG00000003769	-	98	48.997	Bos_taurus
ENSACIG00000004124	utp6	100	53.936	ENSCJAG00000014115	UTP6	100	53.936	Callithrix_jacchus
ENSACIG00000004124	utp6	100	53.679	ENSCAFG00000018507	UTP6	100	53.679	Canis_familiaris
ENSACIG00000004124	utp6	100	53.679	ENSCAFG00020014678	UTP6	100	53.679	Canis_lupus_dingo
ENSACIG00000004124	utp6	100	50.502	ENSCHIG00000017954	-	100	50.502	Capra_hircus
ENSACIG00000004124	utp6	100	50.502	ENSCHIG00000009726	-	100	50.502	Capra_hircus
ENSACIG00000004124	utp6	99	49.414	ENSTSYG00000002202	UTP6	99	49.414	Carlito_syrichta
ENSACIG00000004124	utp6	86	47.117	ENSCAPG00000017595	UTP6	93	47.117	Cavia_aperea
ENSACIG00000004124	utp6	99	53.859	ENSCPOG00000014294	UTP6	100	53.859	Cavia_porcellus
ENSACIG00000004124	utp6	100	49.916	ENSCCAG00000033318	-	100	49.916	Cebus_capucinus
ENSACIG00000004124	utp6	100	54.181	ENSCATG00000034868	UTP6	100	54.181	Cercocebus_atys
ENSACIG00000004124	utp6	99	53.523	ENSCLAG00000007274	UTP6	99	53.523	Chinchilla_lanigera
ENSACIG00000004124	utp6	100	53.512	ENSCSAG00000006595	UTP6	100	53.512	Chlorocebus_sabaeus
ENSACIG00000004124	utp6	72	46.875	ENSCHOG00000010940	-	73	46.875	Choloepus_hoffmanni
ENSACIG00000004124	utp6	100	57.956	ENSCPBG00000004652	UTP6	100	57.956	Chrysemys_picta_bellii
ENSACIG00000004124	utp6	99	30.179	ENSCING00000022947	-	99	30.179	Ciona_intestinalis
ENSACIG00000004124	utp6	54	33.837	ENSCSAVG00000011416	-	99	33.945	Ciona_savignyi
ENSACIG00000004124	utp6	87	40.918	ENSCANG00000031141	UTP6	89	40.918	Colobus_angolensis_palliatus
ENSACIG00000004124	utp6	99	53.769	ENSCGRG00001000046	Utp6	100	53.769	Cricetulus_griseus_chok1gshd
ENSACIG00000004124	utp6	94	52.297	ENSCGRG00000011543	Utp6	100	52.297	Cricetulus_griseus_crigri
ENSACIG00000004124	utp6	100	73.913	ENSCSEG00000013422	utp6	100	93.443	Cynoglossus_semilaevis
ENSACIG00000004124	utp6	100	81.849	ENSCVAG00000020322	utp6	100	81.849	Cyprinodon_variegatus
ENSACIG00000004124	utp6	100	69.076	ENSDARG00000098433	utp6	100	79.006	Danio_rerio
ENSACIG00000004124	utp6	100	54.348	ENSDNOG00000037018	UTP6	100	54.348	Dasypus_novemcinctus
ENSACIG00000004124	utp6	95	52.389	ENSDORG00000003843	Utp6	99	54.779	Dipodomys_ordii
ENSACIG00000004124	utp6	100	54.348	ENSEASG00005010870	UTP6	100	54.348	Equus_asinus_asinus
ENSACIG00000004124	utp6	100	53.846	ENSECAG00000022217	UTP6	100	53.846	Equus_caballus
ENSACIG00000004124	utp6	100	73.950	ENSELUG00000006618	utp6	100	73.950	Esox_lucius
ENSACIG00000004124	utp6	100	51.667	ENSFCAG00000015795	UTP6	100	51.667	Felis_catus
ENSACIG00000004124	utp6	100	57.286	ENSFALG00000002282	UTP6	100	57.286	Ficedula_albicollis
ENSACIG00000004124	utp6	99	53.859	ENSFDAG00000019506	UTP6	100	53.859	Fukomys_damarensis
ENSACIG00000004124	utp6	100	81.513	ENSFHEG00000010373	utp6	100	81.513	Fundulus_heteroclitus
ENSACIG00000004124	utp6	100	72.941	ENSGMOG00000011958	utp6	100	72.941	Gadus_morhua
ENSACIG00000004124	utp6	100	56.951	ENSGALG00000003260	UTP6	100	56.951	Gallus_gallus
ENSACIG00000004124	utp6	100	82.857	ENSGAFG00000008505	utp6	100	82.857	Gambusia_affinis
ENSACIG00000004124	utp6	100	81.513	ENSGACG00000019424	utp6	100	81.513	Gasterosteus_aculeatus
ENSACIG00000004124	utp6	100	57.621	ENSGAGG00000004820	UTP6	100	57.621	Gopherus_agassizii
ENSACIG00000004124	utp6	100	54.606	ENSGGOG00000013569	UTP6	100	54.606	Gorilla_gorilla
ENSACIG00000004124	utp6	100	43.456	ENSGGOG00000026003	-	100	43.456	Gorilla_gorilla
ENSACIG00000004124	utp6	100	91.765	ENSHBUG00000018668	utp6	100	91.765	Haplochromis_burtoni
ENSACIG00000004124	utp6	99	49.578	ENSHGLG00000008642	-	99	49.578	Heterocephalus_glaber_female
ENSACIG00000004124	utp6	99	53.691	ENSHGLG00000010332	UTP6	100	53.691	Heterocephalus_glaber_female
ENSACIG00000004124	utp6	99	50.671	ENSHGLG00100014271	-	100	50.671	Heterocephalus_glaber_male
ENSACIG00000004124	utp6	95	50.704	ENSHGLG00100006047	-	99	50.704	Heterocephalus_glaber_male
ENSACIG00000004124	utp6	100	77.647	ENSHCOG00000017277	utp6	100	77.647	Hippocampus_comes
ENSACIG00000004124	utp6	100	68.235	ENSIPUG00000022587	Utp6	100	68.235	Ictalurus_punctatus
ENSACIG00000004124	utp6	99	55.017	ENSSTOG00000015875	UTP6	100	55.017	Ictidomys_tridecemlineatus
ENSACIG00000004124	utp6	100	83.529	ENSKMAG00000021631	utp6	100	83.529	Kryptolebias_marmoratus
ENSACIG00000004124	utp6	100	84.706	ENSLBEG00000002115	utp6	100	84.706	Labrus_bergylta
ENSACIG00000004124	utp6	100	61.474	ENSLACG00000017158	UTP6	100	61.474	Latimeria_chalumnae
ENSACIG00000004124	utp6	91	65.505	ENSLOCG00000013797	utp6	90	65.505	Lepisosteus_oculatus
ENSACIG00000004124	utp6	100	53.679	ENSLAFG00000013008	UTP6	100	53.679	Loxodonta_africana
ENSACIG00000004124	utp6	85	47.291	ENSMFAG00000041904	-	96	47.291	Macaca_fascicularis
ENSACIG00000004124	utp6	100	54.181	ENSMFAG00000038842	UTP6	100	54.181	Macaca_fascicularis
ENSACIG00000004124	utp6	100	54.181	ENSMMUG00000020403	UTP6	100	54.181	Macaca_mulatta
ENSACIG00000004124	utp6	100	54.181	ENSMNEG00000039480	UTP6	100	54.181	Macaca_nemestrina
ENSACIG00000004124	utp6	100	42.308	ENSMLEG00000039364	-	100	42.308	Mandrillus_leucophaeus
ENSACIG00000004124	utp6	100	47.993	ENSMLEG00000032174	UTP6	100	47.993	Mandrillus_leucophaeus
ENSACIG00000004124	utp6	100	85.882	ENSMAMG00000002228	utp6	99	85.882	Mastacembelus_armatus
ENSACIG00000004124	utp6	100	91.765	ENSMZEG00005023895	utp6	100	91.765	Maylandia_zebra
ENSACIG00000004124	utp6	95	55.634	ENSMGAG00000008111	UTP6	100	55.634	Meleagris_gallopavo
ENSACIG00000004124	utp6	99	53.936	ENSMAUG00000021895	Utp6	100	53.936	Mesocricetus_auratus
ENSACIG00000004124	utp6	100	53.010	ENSMICG00000002632	UTP6	100	53.010	Microcebus_murinus
ENSACIG00000004124	utp6	99	53.434	ENSMOCG00000014163	Utp6	100	53.434	Microtus_ochrogaster
ENSACIG00000004124	utp6	100	79.832	ENSMMOG00000008653	utp6	100	91.667	Mola_mola
ENSACIG00000004124	utp6	100	56.020	ENSMODG00000019206	UTP6	100	56.020	Monodelphis_domestica
ENSACIG00000004124	utp6	100	85.714	ENSMALG00000021112	utp6	100	85.714	Monopterus_albus
ENSACIG00000004124	utp6	99	53.936	MGP_CAROLIEiJ_G0016828	Utp6	100	53.936	Mus_caroli
ENSACIG00000004124	utp6	99	54.439	ENSMUSG00000035575	Utp6	100	54.439	Mus_musculus
ENSACIG00000004124	utp6	99	50.084	MGP_PahariEiJ_G0017965	Utp6	100	50.084	Mus_pahari
ENSACIG00000004124	utp6	99	53.936	MGP_SPRETEiJ_G0017672	Utp6	100	53.936	Mus_spretus
ENSACIG00000004124	utp6	100	51.926	ENSMPUG00000014581	UTP6	100	51.926	Mustela_putorius_furo
ENSACIG00000004124	utp6	100	54.181	ENSMLUG00000016422	UTP6	100	54.181	Myotis_lucifugus
ENSACIG00000004124	utp6	99	54.348	ENSNGAG00000015482	Utp6	100	54.348	Nannospalax_galili
ENSACIG00000004124	utp6	100	91.765	ENSNBRG00000019714	utp6	100	91.765	Neolamprologus_brichardi
ENSACIG00000004124	utp6	100	53.434	ENSNLEG00000011009	UTP6	100	53.434	Nomascus_leucogenys
ENSACIG00000004124	utp6	91	58.156	ENSOPRG00000008446	-	89	58.156	Ochotona_princeps
ENSACIG00000004124	utp6	65	53.419	ENSODEG00000011971	UTP6	99	54.348	Octodon_degus
ENSACIG00000004124	utp6	100	91.092	ENSONIG00000018090	utp6	100	91.092	Oreochromis_niloticus
ENSACIG00000004124	utp6	98	54.762	ENSOANG00000004279	UTP6	99	54.762	Ornithorhynchus_anatinus
ENSACIG00000004124	utp6	99	53.099	ENSOCUG00000016980	UTP6	99	53.099	Oryctolagus_cuniculus
ENSACIG00000004124	utp6	99	81.650	ENSORLG00000003546	utp6	64	81.650	Oryzias_latipes
ENSACIG00000004124	utp6	99	81.650	ENSORLG00020010377	utp6	99	81.650	Oryzias_latipes_hni
ENSACIG00000004124	utp6	99	81.313	ENSORLG00015008893	utp6	99	81.313	Oryzias_latipes_hsok
ENSACIG00000004124	utp6	100	82.353	ENSOMEG00000017487	utp6	100	82.353	Oryzias_melastigma
ENSACIG00000004124	utp6	87	47.318	ENSOGAG00000004511	UTP6	100	47.126	Otolemur_garnettii
ENSACIG00000004124	utp6	100	50.669	ENSOARG00000013474	UTP6	100	50.669	Ovis_aries
ENSACIG00000004124	utp6	100	43.624	ENSPPAG00000016895	-	100	43.624	Pan_paniscus
ENSACIG00000004124	utp6	100	54.606	ENSPPAG00000038089	UTP6	100	54.606	Pan_paniscus
ENSACIG00000004124	utp6	100	54.090	ENSPPRG00000001010	UTP6	100	54.090	Panthera_pardus
ENSACIG00000004124	utp6	100	53.923	ENSPTIG00000013913	UTP6	100	53.923	Panthera_tigris_altaica
ENSACIG00000004124	utp6	100	43.456	ENSPTRG00000044798	-	100	43.456	Pan_troglodytes
ENSACIG00000004124	utp6	100	54.606	ENSPTRG00000008977	UTP6	100	54.606	Pan_troglodytes
ENSACIG00000004124	utp6	99	42.044	ENSPANG00000034274	-	100	42.044	Papio_anubis
ENSACIG00000004124	utp6	100	53.589	ENSPANG00000023113	UTP6	100	53.589	Papio_anubis
ENSACIG00000004124	utp6	100	67.726	ENSPKIG00000004653	utp6	100	67.726	Paramormyrops_kingsleyae
ENSACIG00000004124	utp6	100	57.718	ENSPSIG00000012435	UTP6	100	57.718	Pelodiscus_sinensis
ENSACIG00000004124	utp6	100	82.521	ENSPMGG00000009548	utp6	100	82.521	Periophthalmus_magnuspinnatus
ENSACIG00000004124	utp6	99	53.344	ENSPEMG00000014081	Utp6	100	53.344	Peromyscus_maniculatus_bairdii
ENSACIG00000004124	utp6	93	43.085	ENSPMAG00000009561	utp6	100	43.085	Petromyzon_marinus
ENSACIG00000004124	utp6	100	57.621	ENSPCIG00000029968	UTP6	86	57.621	Phascolarctos_cinereus
ENSACIG00000004124	utp6	100	82.017	ENSPFOG00000013918	utp6	100	82.017	Poecilia_formosa
ENSACIG00000004124	utp6	100	81.849	ENSPLAG00000017825	utp6	100	81.849	Poecilia_latipinna
ENSACIG00000004124	utp6	100	82.017	ENSPMEG00000008133	utp6	100	82.017	Poecilia_mexicana
ENSACIG00000004124	utp6	100	79.160	ENSPREG00000013108	utp6	99	79.160	Poecilia_reticulata
ENSACIG00000004124	utp6	100	53.002	ENSPPYG00000008154	UTP6	100	53.002	Pongo_abelii
ENSACIG00000004124	utp6	100	52.588	ENSPCOG00000010224	UTP6	100	52.588	Propithecus_coquereli
ENSACIG00000004124	utp6	100	53.756	ENSPVAG00000015759	UTP6	100	53.756	Pteropus_vampyrus
ENSACIG00000004124	utp6	100	91.429	ENSPNYG00000002290	utp6	100	91.429	Pundamilia_nyererei
ENSACIG00000004124	utp6	100	66.050	ENSPNAG00000027370	utp6	100	66.050	Pygocentrus_nattereri
ENSACIG00000004124	utp6	99	53.434	ENSRNOG00000014209	Utp6	100	53.434	Rattus_norvegicus
ENSACIG00000004124	utp6	100	54.013	ENSRBIG00000020822	UTP6	100	54.013	Rhinopithecus_bieti
ENSACIG00000004124	utp6	100	54.013	ENSRROG00000036838	UTP6	100	54.013	Rhinopithecus_roxellana
ENSACIG00000004124	utp6	100	69.398	ENSSFOG00015005978	utp6	100	69.398	Scleropages_formosus
ENSACIG00000004124	utp6	100	85.378	ENSSMAG00000014772	utp6	100	85.378	Scophthalmus_maximus
ENSACIG00000004124	utp6	100	87.563	ENSSDUG00000000329	utp6	100	87.563	Seriola_dumerili
ENSACIG00000004124	utp6	100	86.723	ENSSLDG00000016724	utp6	100	86.723	Seriola_lalandi_dorsalis
ENSACIG00000004124	utp6	99	47.819	ENSSARG00000010778	UTP6	99	47.819	Sorex_araneus
ENSACIG00000004124	utp6	100	57.789	ENSSPUG00000005273	UTP6	100	57.789	Sphenodon_punctatus
ENSACIG00000004124	utp6	100	84.034	ENSSPAG00000011871	utp6	99	84.034	Stegastes_partitus
ENSACIG00000004124	utp6	100	54.424	ENSSSCG00000017745	UTP6	100	54.424	Sus_scrofa
ENSACIG00000004124	utp6	100	57.191	ENSTGUG00000004999	UTP6	100	56.856	Taeniopygia_guttata
ENSACIG00000004124	utp6	99	79.798	ENSTRUG00000012005	utp6	100	79.798	Takifugu_rubripes
ENSACIG00000004124	utp6	99	79.293	ENSTNIG00000003235	utp6	100	79.293	Tetraodon_nigroviridis
ENSACIG00000004124	utp6	69	56.906	ENSTBEG00000005388	-	67	56.906	Tupaia_belangeri
ENSACIG00000004124	utp6	100	53.010	ENSTTRG00000009911	UTP6	100	53.010	Tursiops_truncatus
ENSACIG00000004124	utp6	99	53.020	ENSUMAG00000015139	UTP6	99	53.020	Ursus_maritimus
ENSACIG00000004124	utp6	100	53.846	ENSVPAG00000005782	UTP6	100	53.846	Vicugna_pacos
ENSACIG00000004124	utp6	100	53.846	ENSVVUG00000012238	UTP6	100	53.846	Vulpes_vulpes
ENSACIG00000004124	utp6	100	48.087	ENSXETG00000020057	utp6	100	48.087	Xenopus_tropicalis
ENSACIG00000004124	utp6	100	81.742	ENSXCOG00000013626	utp6	100	94.595	Xiphophorus_couchianus
ENSACIG00000004124	utp6	100	81.849	ENSXMAG00000017414	utp6	100	81.849	Xiphophorus_maculatus